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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:438823..443205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014965 ID=XLOC_014965|Name=XLOC_014965|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4383bp|location=Sequence derived from alignment at sc0000001_pilon:438823..443205+ (Clytia hemisphaerica_ch_hm2_pilon)
cacTTTTTAAGATTAggcagaaaaaaaactgaagaacaaCAAGATATCAC
ACAAAGAGGCTCTATTAAAAGTATGCCGAAATTGAACCCATACTGTATTG
CACATGCAGGCTACTTATGGAAATCACCACCGTTGAAAAAACAACACGTT
GCTCGTTGGAAATATCGTTATTTCGTTCTATATGATACCTTTACTGATGT
CCACAAAGACGGGGGTCGAGAACTGGAATTGATTTATTATGAGAACGATA
AAGCGGCAAGCAGGGGTGAAAAGTATATTGGTAAGATCATTAATTTTGCC
CTTTGTATTACAATTTAGTGgtaaagatattttgaaaaggtTAAAATACG
TTTCATACTAACTTTCAAAACCCTGAAACATCacaaatttccattttttt
taattgttgtcTGAATTTACAAGTGCCGGGAGAATATTTCagacagtggg
gatgaaatgaaTGAGATAAAAAGTCTTGCGGAGATGGAAGgtcttttgtt
tttatcaagtcgGGAGTAGGAGTTTCAATTTTATCATCTAAAGCTCAATT
ATTAAACGGAGATTCTCAAAATTCCAATAGTTTTCCCTAGTAGCTAGTAG
GGATGAGAAACTTCTCTGGGGACCGAAAGGAAAACAAAACAGTTGATTAG
TGCTTCGAGctgaattcaaatatttttcgaaGATACCCATGAAATCTTTC
TACGTAAATTTTATCATACATATAAACCCTTTCactcaaaataatattta
tcATCTAGGTTCGATCAATTTGCTAGATATCAAAGTATTAGCTGTTTCAG
ACAAACCAGTCAATGGCTTTCCTTTTGTACTTCGAATTGTGGCCAATGAC
AGAACATGGTTTCTATGTACAAAATCATATGACGATTTTACAGATTGGAT
TGCAGAATTGAAAGAAAGAACTGACCGATTTGTTAACAAGGTGAGTCAGG
GGATATTCTGTTGGTAATGAATGTACTTTTCCAGAAATGAGGATGAAGGA
TGAATCATTTTTGATGATTTGACCCTGGACATTTTGGCCCCATAGCCCGG
AAGGGGCACTCGATTtttaaacgacggcatgtgccgccaaaaataTGGCT
TTTAAAATCGGAATCTTACAGTGCGGCCATTGAGCAATGAAAAattaccc
ttacagtgcatttctgccccttacagtgtagtttgatttcataagTTATT
TAGGTAAAGTCACCTGAAAATGAGTCAGAGGTGTCGACAAAAtgagcaaa
acaaatcaaaatgggtgcgagacaaaatataattattcatcagattttta
ctgtcagtaGTCACCAaacatacccttacagtgtatccagctaaaagaag
acccttgtagtgcactctatcaaaagtagaCCTTGAGGGTCACGAAAAAt
ttacccttaagggtggcaaaTGTCGTTGGTCGAACCATATGAGTGCCCGC
CGGGCCCCATAGTCACGATTTATAACCCACCTGGACAAGCTCCAAGAATA
CCAAAATTTACCTTTGGGTATCAACAACTTTAACAATAACAAATTGCCAG
TAACTATTAAAACatcctgtctcacagctccggtgGAACTTTCTTCCTCT
atagggatagaaattcctattgaaatcccaatggggatagaaatccTGTT
ATTAAAAGTTTAAGAGATCCAGTGGGGaaggttttggagtgcaatttttt
taatattgaatttcgaatgggtaTAAAATCAGAATCAATtccccagtggg
gctgaaatttcagtgtattttcccaccggggacaaacTTTTTGTCAAACT
TTCCAGTAGGGCTgaggtcccagcgggtctgtgacacaggggtgtattag
aTAACTATTCTTAATTTTCAGAACACAAGTCACATTCGACAGCGCAGTCA
ATACGGGATGCAACGAAGCAATAGCATGAGGTAAGAATGAATACCATACA
GCCATATCTTACCCAGTTGGCACGCAACGTCGTTTgaacgtttttctaat
attcacaacgtccatataacgttagatgaacgtcgaaaaaacgGGAGTAA
AAACCATCTGGGTAAAAACAGATTTAGACCGCAAGTGCGATCTTGATAGA
TAGATGGATAGTGTctagattttatattttatattttacgtggatagccc
agtaatgtAGGACCTTTAGTtggtctttcgattgtttttagggggtccac
ggccagccgaaTATTGGAAGGAGTGATGATTCGAACCAGGGGGCTTGAAA
TATTTCACAAGGTCGAGTCCCAAAAATTTCTATATTGCTTTACGGAAATT
CATGAAATCACGTGaagaaaactacaaaaaaaGTCCTTATTGTAATAGAG
ATAATCTGCACTGACGGTTCCAGAGAGACTTTATCGAAGAAAGAACGAAG
CTCTGGTTCGGTTACACTAAAGATCTTGTAGATCTCTGGAAAAGAAAATT
CTCCTATTTTCATAAtcaattcttcatttttatagcaCACTTGAAAGCTC
AACAACAGGAAGTTGGAGTGCTATATCCAGAGATCGGCTAAATACGACAG
ATGTCATAGACTGTATTCAAGATCCAAAGCTGTTTCCAGACCGTTTCGAT
CGAACAGATGATAGGCTTGAGGGAAATGTTAGTGGGATTCAACgttcaaa
aacaatttcttcAGCGACACCGAGACGATCAACTTTTGTTGGGAAGCTGT
TCCAGCAGTTTGGGACTTGGAATAAAAATAGGAGTAAGTATAAACCTTTG
ATTTTCATACTGAATGGTACTTGAGAAACGAGTCGTATATCTAGAAACTC
TTGAAGATTAATGGGccatttcattaaatttccatataGGGCGATGGGCG
AATCTTTTcaatcaagtcaaaaaaaaaatcatagaaaTGGGTGGATACCC
ATGGAAAATAGCAAGATTTACaaaaaaccgttgaaaaaattcgtctcata
ccttaaagttaccgaggaaaaaactaaaatcagtaATCCACccctagaaa
ttttgaaatgattgtttacccccttggaaaaatgaaaaaaaactctttta
gACTCCCTGAAAGTTCTGCTCGAATAACCCCTGGAAAGGATCGTCCAcct
cctgtatggatataaaatggaatggctcaGTTCAAAGTGGACATGACTTA
CAAGCATTCCTCCCTTCGTTTTTGATGCCGACTGAATAAGCGTACAAACA
ATTACTTCATCTGAGTCTGTTGCTAAGAGGGGGATGGCCATTGACAAAAC
CTATGGCACAAAGCACAAAAACGAGCATCCCCTCTCCCCCGAAACAATGT
TGTTGCTCAGGACAGgtcaaaaaatgtttctttcccGCCAACAATGTTCG
GAGGGGAGGGGAGGATATTGAAATGTATCTAAATTTGACCACCGGAAATT
AGCCacataatatattggcaacgATTGTAGGGGGGAGGAGCTAAGAAATA
ATtccaaatctttttaaaattaaccCAGGATCACTTCGGGGAATTGAAGA
AGGAAATGACGAACGAGATCAAGACCAACCCAAGGACAAAACTTCCTTGC
GTCCGTCTCTTGCTGCGACATTTCAACAACCATTTACACCCGTTTACGAT
CCATTCGAAAACGCATTTCAAGGCCCTACACTCAAATCAAAAACATATCA
ACGTGAAAGACAATTTGCACCGTACGATATGGGATCTTCGGCATCAACCC
CGAACAGTTCGGGATATAGTACTGATCTTTCAGATTACCATGATTCTTTC
AAGGCAAGATTCAATCAAGAATTAAATAATAATCAACGGAGCCATTCAAA
TAGACCACGTGATAACCAAGACAATATCAGTCGAAGTTCAAGCAGTGGTA
GCAGTAACGCAGGACGGAGTCCAGTCAGTCACTTATTCTCAAAAAGACAA
TTATCAATGATCCAAGAATCCCGATTAGGGGATGATATCAACCGTTTTGA
AACCGATTCGGATACTTCATCAAAATATCACGAGGAAATGGAATTACCAT
CACCGTGTGGTTCTATCATTTGCCAAAATGATGGCCAAGGTTTTGGttca
gaaaacgaaagtgtcccCCCATCCAGTCATTCGCATTCTACAAATCACGG
AGATCGGTCAATTCAAAATGATGACGGGAGAGCAAGCAATCTAAACGTAG
ATAACGCACAACATACCAGTTCCTTGGCAACAGCAAATGATTCCGAAGAT
GAGCAATGTAGAATCTCAAGAAGCAGCATGAGAAGTTACAGAAGGCGCCG
AAGCTGTGAGGAAAATCAGATCACCAGAGATCTCGATGACAATCATCCTG
TATTTAAAGTGTCAGTCGCCTTTTCCATGGATGATTTGAGCAATATTGAT
GATGGGTTGGAGAAGAATGAACAAGAGGAATAG Coding sequence (CDS) from alignment at sc0000001_pilon:438823..443205+ >XLOC_014965 ID=XLOC_014965|Name=XLOC_014965|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3348bp|location=Sequence derived from alignment at sc0000001_pilon:438823..443205+ (Clytia hemisphaerica_ch_hm2_pilon)
cacTTTTTAAGATTAggcagaaaaaaaactgaagaacaaCAAGATATCAC
ACAAAGAGGCTCTATTAAAAGTATGCCGAAATTGAACCCATACTGTATTG
CACATGCAGGCTACTTATGGAAATCACCACCGTTGAAAAAACAACACGTT
GCTCGTTGGAAATATCGTTATTTCGTTCTATATGATACCTTTACTGATGT
CCACAAAGACGGGGGTCGAGAACTGGAATTGATTTATTATGAGAACGATA
AAGCGGCAAGCAGGGGTGAAAAGTATATTGcacTTTTTAAGATTAggcag
aaaaaaaactgaagaacaaCAAGATATCACACAAAGAGGCTCTATTAAAA
GTATGCCGAAATTGAACCCATACTGTATTGCACATGCAGGCTACTTATGG
AAATCACCACCGTTGAAAAAACAACACGTTGCTCGTTGGAAATATCGTTA
TTTCGTTCTATATGATACCTTTACTGATGTCCACAAAGACGGGGGTCGAG
AACTGGAATTGATTTATTATGAGAACGATAAAGCGGCAAGCAGGGGTGAA
AAGTATATTGGTTCGATCAATTTGCTAGATATCAAAGTATTAGCTGTTTC
AGACAAACCAGTCAATGGCTTTCCTTTTGTACTTCGAATTGTGGCCAATG
ACAGAACATGGTTTCTATGTACAAAATCATATGACGATTTTACAGATTGG
ATTGCAGAATTGAAAGAAAGAACTGACCGATTTGTTAACAAGGTTCGATC
AATTTGCTAGATATCAAAGTATTAGCTGTTTCAGACAAACCAGTCAATGG
CTTTCCTTTTGTACTTCGAATTGTGGCCAATGACAGAACATGGTTTCTAT
GTACAAAATCATATGACGATTTTACAGATTGGATTGCAGAATTGAAAGAA
AGAACTGACCGATTTGTTAACAAGAACACAAGTCACATTCGACAGCGCAG
TCAATACGGGATGCAACGAAGCAATAGCATGAGAACACAAGTCACATTCG
ACAGCGCAGTCAATACGGGATGCAACGAAGCAATAGCATGAGcaCACTTG
AAAGCTCAACAACAGGAAGTTGGAGTGCTATATCCAGAGATCGGCTAAAT
ACGACAGATGTCATAGACTGTATTCAAGATCCAAAGCTGTTTCCAGACCG
TTTCGATCGAACAGATGATAGGCTTGAGGGAAATGTTAGTGGGATTCAAC
gttcaaaaacaatttcttcAGCGACACCGAGACGATCAACTTTTGTTGGG
AAGCTGTTCCAGCAGTTTGGGACTTGGAATAAAAATAGGAcaCACTTGAA
AGCTCAACAACAGGAAGTTGGAGTGCTATATCCAGAGATCGGCTAAATAC
GACAGATGTCATAGACTGTATTCAAGATCCAAAGCTGTTTCCAGACCGTT
TCGATCGAACAGATGATAGGCTTGAGGGAAATGTTAGTGGGATTCAACgt
tcaaaaacaatttcttcAGCGACACCGAGACGATCAACTTTTGTTGGGAA
GCTGTTCCAGCAGTTTGGGACTTGGAATAAAAATAGGAGATCACTTCGGG
GAATTGAAGAAGGAAATGACGAACGAGATCAAGACCAACCCAAGGACAAA
ACTTCCTTGCGTCCGTCTCTTGCTGCGACATTTCAACAACCATTTACACC
CGTTTACGATCCATTCGAAAACGCATTTCAAGGCCCTACACTCAAATCAA
AAACATATCAACGTGAAAGACAATTTGCACCGTACGATATGGGATCTTCG
GCATCAACCCCGAACAGTTCGGGATATAGTACTGATCTTTCAGATTACCA
TGATTCTTTCAAGGCAAGATTCAATCAAGAATTAAATAATAATCAACGGA
GCCATTCAAATAGACCACGTGATAACCAAGACAATATCAGTCGAAGTTCA
AGCAGTGGTAGCAGTAACGCAGGACGGAGTCCAGTCAGTCACTTATTCTC
AAAAAGACAATTATCAATGATCCAAGAATCCCGATTAGGGGATGATATCA
ACCGTTTTGAAACCGATTCGGATACTTCATCAAAATATCACGAGGAAATG
GAATTACCATCACCGTGTGGTTCTATCATTTGCCAAAATGATGGCCAAGG
TTTTGGttcagaaaacgaaagtgtcccCCCATCCAGTCATTCGCATTCTA
CAAATCACGGAGATCGGTCAATTCAAAATGATGACGGGAGAGCAAGCAAT
CTAAACGTAGATAACGCACAACATACCAGTTCCTTGGCAACAGCAAATGA
TTCCGAAGATGAGCAATGTAGAATCTCAAGAAGCAGCATGAGAAGTTACA
GAAGGCGCCGAAGCTGTGAGGAAAATCAGATCACCAGAGATCTCGATGAC
AATCATCCTGTATTTAAAGTGTCAGTCGCCTTTTCCATGGATGATTTGAG
CAATATTGATGATGGGTTGGAGAAGAATGAACAAGAGGAATAGGATCACT
TCGGGGAATTGAAGAAGGAAATGACGAACGAGATCAAGACCAACCCAAGG
ACAAAACTTCCTTGCGTCCGTCTCTTGCTGCGACATTTCAACAACCATTT
ACACCCGTTTACGATCCATTCGAAAACGCATTTCAAGGCCCTACACTCAA
ATCAAAAACATATCAACGTGAAAGACAATTTGCACCGTACGATATGGGAT
CTTCGGCATCAACCCCGAACAGTTCGGGATATAGTACTGATCTTTCAGAT
TACCATGATTCTTTCAAGGCAAGATTCAATCAAGAATTAAATAATAATCA
ACGGAGCCATTCAAATAGACCACGTGATAACCAAGACAATATCAGTCGAA
GTTCAAGCAGTGGTAGCAGTAACGCAGGACGGAGTCCAGTCAGTCACTTA
TTCTCAAAAAGACAATTATCAATGATCCAAGAATCCCGATTAGGGGATGA
TATCAACCGTTTTGAAACCGATTCGGATACTTCATCAAAATATCACGAGG
AAATGGAATTACCATCACCGTGTGGTTCTATCATTTGCCAAAATGATGGC
CAAGGTTTTGGttcagaaaacgaaagtgtcccCCCATCCAGTCATTCGCA
TTCTACAAATCACGGAGATCGGTCAATTCAAAATGATGACGGGAGAGCAA
GCAATCTAAACGTAGATAACGCACAACATACCAGTTCCTTGGCAACAGCA
AATGATTCCGAAGATGAGCAATGTAGAATCTCAAGAAGCAGCATGAGAAG
TTACAGAAGGCGCCGAAGCTGTGAGGAAAATCAGATCACCAGAGATCTCG
ATGACAATCATCCTGTATTTAAAGTGTCAGTCGCCTTTTCCATGGATGAT
TTGAGCAATATTGATGATGGGTTGGAGAAGAATGAACAAGAGGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:438823..443205 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-1674:3481 |
| Aaloc | 523-768:2487 |
| Aaloc | 463-519:1872 |
| Aaloc | 283-462:761 |
| Aaloc | 1-279:1 |
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