|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000217_pilon:444784..446783+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041110 ID=XLOC_041110|Name=XLOC_041110|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2000bp|location=Sequence derived from alignment at sc0000217_pilon:444784..446783+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGCAAAAGTGTTTTTCCTCAGCtgttaaaaatggaaaatcttgtGGCCC
TGATAATATTTCTTCAAAGGAATTGAAATTACATGAAGCAACGTCAGTTT
CAAgccttttcaaagttttttgttaAAGTATTGAGCATGGGTCCTTTCCA
TCAACTTGGAAAACTGCAAGGGTATCCTGTATATATAAAAACAAGGGATC
AAAGAAAGATTGTGGTAATTATCGTTCTATTTCACTGTTATCTATACCAA
GTAAAGTCGTTGAGAAATCCATTTGCAAAGCTCTAGTTGGTCATTTGGAA
TCATTCAATCTTTTCAGCAATTTTCAATGGGGTTTTCGCAAACAGAGCTC
TTGTGAAGATCTTCTTCTTCATATGACAGAGAAATGGCTGAAATCTATTG
ATTCGGgaaaagttgttgttgttttatttattgactttcaaaaagcattc
gATAGTGTAGCTCATCCTATTTTGCTTGATAAACTGACTGGGTGTGGAAT
ATCTGGATCATTTCTTGAGTACATAAAATCCTATTTAGATGATCGCTCTC
AGTATACAATAATCAACGTAACGGTATTACATCAGAtaatagtcaggtag
aattacatAACTACccagacaaaaatggtgtagaaatgaaattttgcaca
gaggtccaggaacatgtcacgaatcaccaaaaaaaaaagccccaccccca
ggaagatggTTTAATATGTTTAGATCAGCCGTTGGCGAGGAAAGCCCGTG
ATCAGGGCTACATAATTAAATCATCGACGTTCCAATTTACCCATCTCAGT
AAAAATGCTGCTGCCATCAAAATCGTCATTGtttggactttagaggtcat
atctcgggtccacgtggtccaaatttcaaaagtgaccccattttctttat
ctactcatCGAGAGGAATCTCCCTGTCTAGTTATTCTTGACAtttgaaaa
ccattaaaaatcagTTATCAAGGGTCCTCCCCTTgattaattgtagaaaa
aagtaccatgtttgccattatggatttgagggtgttcccatcttcctagg
ggtggggcttttttttggtgattACCATTTTTGTCCCGGTTTTGGCGGTT
CAtgacctaattctacctgactataaaGCAAATGTTCGATATGGTGTACC
ACAGGGATCCATTCAAGGTCCTAATTGTTTCTCATCGTACATCAATGATA
TGCCAAGTGAAGTCAATCCTATTGATGGAGAGCTTGATATGTTTGCAGAC
GACTCAACTGTTTTCGAGGAGGGTGACACTGTTGATTTAACAATGGTAAA
AATGGCTGTTACTGCCAAAAAAGTAGAAGTGTATTCAAAGAGAAATTCTC
TTACGATACATCCAGGGAAATGCAAGATTCTTGTGATTTCAAAGAAGCCT
TTTATTGGTCCTTTACAGGCTGTAAAACTAAATGGTAAAGTTGTTGAATG
CGTCCCTAATACAAAATGTCTAGGCGTGACAATAGACCAGCATTTAAATT
GGGAAGCACATATATCTGAATTGTGTCAACAATTTTACGCAAAAGCTAAG
AAACTCTATACTATGAGAGCCATGTCGAAAATTACCTTATTGACAATTTA
TTTCCAAGGTGTTCTGCAGTCTGTCCTCTATGCAATACTTATTTGGGGTA
GCTCAAATCATCTTCAATACTTACCAAATATTCACATGAAAGCTGCTCGT
TTTATAATGCGTATTAAAAAGTCTGTACCCGATTATGAAGTCCTGAAAAA
GGCAGAGTGGAAACCAATTGAGTATTATTACAAGGGCTCAATAGCATCAA
AGGTATTCACAGTTTTCTATAATCTGTCACCAAAACCACTTTCTTCACTG
GTATCAAGAAGTGACAAGCGCAAAAACCGGAATTCATTTAAGCTTGAATT
GCTCAGATATAATTATGTTGGTTAGAAGAAATCATTTTGCTATCGGGCGA
CTAATGTTTGGAATGTTTTACCAGTCGAACTAAGGCAAAAGACTTACAAC
Coding sequence (CDS) from alignment at sc0000217_pilon:444784..446783+ >XLOC_041110 ID=XLOC_041110|Name=XLOC_041110|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2916bp|location=Sequence derived from alignment at sc0000217_pilon:444784..446783+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGCAAAAGTGTTTTTCCTCAGCtgttaaaaatggaaaatcttgtGGCCC
TGATAATATTTCTTCAAAGGAATTGAAATTACATGAAGCAACGTCAGTTT
CAAgccttttcaaagttttttgttaAAGTATTGAGCATGGGTCCTTTCCA
TCAACTTGGAAAACTGCAAGGGTATCCTGTATATATAAAAACAAGGGATC
AAAGAAAGATTGTGGTAATTATCGTTCTATTTCACTGTTATCTATACCAA
GTAAAGTCGTTGAGAAATCCATTTGCAAAGCTCTAGTTGGTCATTTGGAA
TCATTCAATCTTTTCAGCAATTTTCAATGGGGTTTTCGCAAACAGAGCTC
TTGTGAAGATCTTCTTCTTCATATGACAGAGAAATGGCTGAAATCTATTG
ATTCGGgaaaagttgttgttgttttatttattgactttcaaaaagcattc
gATAGTGTAGCTCATCCTATTTTGCTTGATAAACTGACTGGGTGTGGAAT
ATCTGGATCATTTCTTGAGTACATAAAATCCTATTTAGATGATCGCTCTC
AGTATACAATAATCAACTGGCAAAAGTGTTTTTCCTCAGCtgttaaaaat
ggaaaatcttgtGGCCCTGATAATATTTCTTCAAAGGAATTGAAATTACA
TGAAGCAACGTCAGTTTCAAgccttttcaaagttttttgttaAAGTATTG
AGCATGGGTCCTTTCCATCAACTTGGAAAACTGCAAGGGTATCCTGTATA
TATAAAAACAAGGGATCAAAGAAAGATTGTGGTAATTATCGTTCTATTTC
ACTGTTATCTATACCAAGTAAAGTCGTTGAGAAATCCATTTGCAAAGCTC
TAGTTGGTCATTTGGAATCATTCAATCTTTTCAGCAATTTTCAATGGGGT
TTTCGCAAACAGAGCTCTTGTGAAGATCTTCTTCTTCATATGACAGAGAA
ATGGCTGAAATCTATTGATTCGGgaaaagttgttgttgttttatttattg
actttcaaaaagcattcgATAGTGTAGCTCATCCTATTTTGCTTGATAAA
CTGACTGGGTGTGGAATATCTGGATCATTTCTTGAGTACATAAAATCCTA
TTTAGATGATCGCTCTCAGTATACAATAATCAACattctacctgactata
aaGCAAATGTTCGATATGGTGTACCACAGGGATCCATTCAAGGTCCTAAT
TGTTTCTCATCGTACATCAATGATATGCCAAGTGAAGTCAATCCTATTGA
TGGAGAGCTTGATATGTTTGCAGACGACTCAACTGTTTTCGAGGAGGGTG
ACACTGTTGATTTAACAATGGTAAAAATGGCTGTTACTGCCAAAAAAGTA
GAAGTGTATTCAAAGAGAAATTCTCTTACGATACATCCAGGGAAATGCAA
GATTCTTGTGATTTCAAAGAAGCCTTTTATTGGTCCTTTACAGGCTGTAA
AACTAAATGGTAAAGTTGTTGAATGCGTCCCTAATACAAAATGTCTAGGC
GTGACAATAGACCAGCATTTAAATTGGGAAGCACATATATCTGAATTGTG
TCAACAATTTTACGCAAAAGCTAAGAAACTCTATACTATGAGAGCCATGT
CGAAAATTACCTTATTGACAATTTATTTCCAAGGTGTTCTGCAGTCTGTC
CTCTATGCAATACTTATTTGGGGTAGCTCAAATCATCTTCAATACTTACC
AAATATTCACATGAAAGCTGCTCGTTTTATAATGCGTATTAAAAAGTCTG
TACCCGATTATGAAGTCCTGAAAAAGGCAGAGTGGAAACCAATTGAGTAT
TATTACAAGGGCTCAATAGCATCAAAGGTATTCACAGTTTTCTATAATCT
GTCACCAAAACCACTTTCTTCACTGGTATCAAGAAGTGACAAGCGCAAAA
ACCGGAATTCATTTAAGCTTGAATTGCTCAGATATAATTATGTTGGTTAG
AAGAAATCATTTTGCTATCGGGCGACTAATGTTTGGAATGTTTTACCAGT
CGAACTAAGGCAAAAGACTTACAACattctacctgactataaaGCAAATG
TTCGATATGGTGTACCACAGGGATCCATTCAAGGTCCTAATTGTTTCTCA
TCGTACATCAATGATATGCCAAGTGAAGTCAATCCTATTGATGGAGAGCT
TGATATGTTTGCAGACGACTCAACTGTTTTCGAGGAGGGTGACACTGTTG
ATTTAACAATGGTAAAAATGGCTGTTACTGCCAAAAAAGTAGAAGTGTAT
TCAAAGAGAAATTCTCTTACGATACATCCAGGGAAATGCAAGATTCTTGT
GATTTCAAAGAAGCCTTTTATTGGTCCTTTACAGGCTGTAAAACTAAATG
GTAAAGTTGTTGAATGCGTCCCTAATACAAAATGTCTAGGCGTGACAATA
GACCAGCATTTAAATTGGGAAGCACATATATCTGAATTGTGTCAACAATT
TTACGCAAAAGCTAAGAAACTCTATACTATGAGAGCCATGTCGAAAATTA
CCTTATTGACAATTTATTTCCAAGGTGTTCTGCAGTCTGTCCTCTATGCA
ATACTTATTTGGGGTAGCTCAAATCATCTTCAATACTTACCAAATATTCA
CATGAAAGCTGCTCGTTTTATAATGCGTATTAAAAAGTCTGTACCCGATT
ATGAAGTCCTGAAAAAGGCAGAGTGGAAACCAATTGAGTATTATTACAAG
GGCTCAATAGCATCAAAGGTATTCACAGTTTTCTATAATCTGTCACCAAA
ACCACTTTCTTCACTGGTATCAAGAAGTGACAAGCGCAAAAACCGGAATT
CATTTAAGCTTGAATTGCTCAGATATAATTATGTTGGTTAGAAGAAATCA
TTTTGCTATCGGGCGACTAATGTTTGGAATGTTTTACCAGTCGAACTAAG
GCAAAAGACTTACAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000217_pilon | genome | sc0000217_pilon:444784..446783 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 979-1869:1110 |
| Aaloc | 412-978:1 |
|
