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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:831890..836225+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044116 ID=XLOC_044116|Name=XLOC_044116|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4336bp|location=Sequence derived from alignment at sc0000089_pilon:831890..836225+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAAAGAGAAAAGTAACGGCTCACAATCCGGCAAAAACAAGCCACG
CCGACTCCGAATTAAGAGAAGCTCCACCAAAGAGAATAATCGAACGTCTC
AAACTCAAGAAGAAAGTTCCCCTCCGCCGTACCAGAGTAAACTACAAAGT
TTGTTCGCACAAATCGAGAAAGAATTCcaaaaacttcatcatcaaaatca
agaatgtgagttttgttttttcattgatagatactcgttttttcttttct
ttggttcttttttgatccaacctaggttaaaaggttttgctttttAACAA
GAGTGATGTCGTTTGcctactcatcaattttaattcacaagctttttcac
attggattgaaaCGGATGTggaggaagacactgtcctgatatgaaatatg
tgtttgatatgaaacgggaacactcatgcaaaaataaaacctttaagagc
AATTCTTCGATCTTGGCGCATTTACTTCTCCCTTACACGTGGTATTATCG
TTTCTCCCTTATCGTTTTTCAGTACAcgagaaagttgatattctgaCGGA
AAAATATGAACAGTTAGTTGCAAACGGAGTCGACAAATCGGACAGCAAAA
TACCGACGTATAACGATTCCTACGCTGGTTTGGACACCAATGATTTTTAT
TCAAAGGGAAACAAAAAACAATGTGAGTGGGCattctctttcatttttta
ccgTCTAGAAATATTTTGGGCTACGAGGATTAACCTTCGCTTCTTTCTGT
TTGTTTGAAGTTCTGTCTACCTTTGAAAAGATgtgaatttctttcaaatt
atattttcaCCCCCAAACAATGGGAAGTTTTACATAGCGACTACCTGTAA
ATCAACTTCATCGACGCATTGTCTAGATATTAAAACGAGCCACCCCCGTC
TTGTCTGATGGGAATTTTaggtttgaaaatttaaaagatttttccctcat
ttttctcaaagTTACTCTTTAAGAACCCAGAATATGATCTGTAGACTCTT
CATCAATATGacctgtttctttttttctaacagCGGCCAGTTCGTtgatg
tcacaaaaattgaagaCAAGATACAAAGCCTCCACTAGCAAGGTATCTTT
CGAATGATAACGTAATCATTGCATTAACTCCAAATGATACTATCTAAGAT
TATGtaatattataaaaaattctcttaTCTTGAATAATGATATGTCATAG
TAAAAGAAGTAATTCTATCGCCCGCCCAACTATCTGTGATAAGTCAACAC
TAGTTTCTTTATTGTGTCTGTCATTTTGCATGACAATCGCGCAAACTAAA
ATTGACACCAAATTtttccactttcgttttcgaacaGCTTGTGTCCAGTT
TCAAAATACCAAACAGTCAAGGAGGAAATGTCTTTTGTCACATGGTACAA
AAATATGCGGGTCACAAAGACGGGATATGGGATTTGGATTCGCAAAAAAC
AAACTCTTTTCTCATCGGAACGGCGTCTGCAGGTTTCACTTTGTCTTTGT
CTTGGATGTTCTTGATCATTACAGTTGCTCAGATGAAAAGAATATTCTTA
TCTACGCCAGATATTCGTGATATATACCAtttcttctaacattacatcgt
GGACtgaacagctgattggttgtgacgtaaaatcattcaatacgtcactt
tcaaccaatcagctgttgggtccatggaAGAAATTGCAATGGGGCATATC
TTGAATACTGATCATCAAGTGATATCtttcatgaatttttaaaaagaact
ttCAACGAATTTCAACATTTACTCTAAGATATATTTCATTTTGTATATCT
CACAAGAGAATGGGAGCAATGACTATCTTGTAAGTTTAATATGCATCATT
TCTCACTTTAGATCGAACAGCCAAGTTATGGAATGCAGAGACAGGTCAAT
GTTTGATCACTTACATGGCTCACAATGGATCAGGTTCGTAACTCTTATTA
ATTTATTCGTCATTGTGAAGTTTAACTACAACGTGTAAATAATGTGTATA
TTATTCCTGTATAAGTCCTGCaatttattttactttctttttcagtGAAC
TCGATTCGCTTCCACCCTACAGAACCTCTAGCTTGTACAGGTAATTCAAA
CTATTTCTCATTCCATTTTATCTTTTCTCTATAAAGATTTACTGACATTA
TCAATCCATAATCAACCCTTTTCACCAACCCATGCTCACTTCTTCTCTTG
CAGGTTCAGGAGATGGTAATGCACATATTTGGAAAATTCCCCCTTTATCT
GATGTTCGAAGTCGCTCTCCTCAAGGAAATTCTGACTCGCCTGCTGTGAG
TTTTTATATTGCCAACTCGTGCTCTCATTTATAAGAATAGTATCTAACAA
TGGAAATGATAGCGAATATTTTTCAACAAGGGCTGCGAGTAAGTCTTTCA
GcgggttgaaaatttttcagcGAAGGACTGagattcattcattcattcat
tcactgATTGATTTTTGTAGGGCTCAGGAGAGGACGACTTAGAAGACGAA
GGAGAAGGAACGGACAATCAACAAATCATGAAAATCAAACATTCTTCCGT
CGAATTCTCGCAACATGAAGGTTCGCAATCTCTCTTCTACTGTTTTATTC
ACTAGAGAAGGTTCTTCTACTGTTTTATTCACTAGAGAAGGTACCATAAG
TTTTCTTATCATAGTTAGACCTCACCAAAAGAATTGCCAAAAAAGTCTAA
ATCTCACCGGAATGGTAAACCACCCACAAGGATAGTATACAGTAGTATAT
CATAATAGCAATAATACTTTTCCGATTCATTTTCACAGGTCCGATAGCGG
TGGCAGATTGGTGGGAGAATGGAAGTCAGATCGTCACTGCTTCATGGGAT
CGAACGGTCAAACTGTGGGATGTCGAAAAAGCCACCGCATTTTATACTAT
GGAAGGTAATTAAAAGTTTGTTATGGTCACGAGTTTACGTggaatctttt
attttttcaccgacggtaaatctcttttctttctttttttcaggccACGA
GCTGGAGATCACTCACGCCTCAACACACAGCAGTCACAAACTGATAGTGA
CGTCATCACAAGACACAACGTTTCGCTTATGGGATTTCAGACAGCCTTAC
ATGCATTCTGTGAACGTGTTCCAGGGCCATACTGAGTATGAGTGAACTAA
TTTCAAACTCTATTACCTTTGAGCCTGACTGAGCGAACCATGACGTATTA
TCTCTAAATATTATCCCAGTGAAAATTCTACTGTGATAGCAAGTAGTTCT
TATAGCCTCGTTTCCATTTCTCATTATAGCACggtgacgtcagcagtttt
caCGACGAAAGCGGATCACGTGGTGAGTGGAAGTGACGATCGAACAGTTA
AGGTGAGTTTGACCATGCTCCTTTTGATGCAGACTGAAATATTACCCTCA
AAGAGCTGAATCTTAACTTCTATTATACtgtcttttttgagtttttggta
TCTATGTACAAGACAAGTAATGCTTCCAAACCTTCAAAACGTAGCTCACA
GATAAAGTATTGGCCCAGCTTTGCACGTGTCtcgaagacaaaaaaaaaac
agcagaaaccATCGACAAATAACGAATGTGTATGATATTTTCACTTCAGG
TTTGGGATTTGAAAAACATGCGTTCTCCCCTAACGACGATACGCCTCGAT
TCCGCCATTAACAGGTATATGTCTACTTGGCTTTTGCATGTACCACCCCG
CCCACGGGcgttttctatatttttgaagaaaaaaaaccttatcttttcag
tcagcgaagaagagtttggcACAGGCTACTTTGCTTTTGGTTGTTTTCAT
TTGAAGTGTtgagaaaaacaaatctttgtgaatttttcctcttttctttA
TCAGGTTATCATTGTCACCTGCTCAAAACATCATCGCCATTCCTCACGAT
AATCGACACGTGCGGCTTTATGATTTGGCTGGTAATCGTATGTCTCGCCT
ACCCAGACGTCATCGACAGGTAAGAGTGATTCTTGGCTGCATTAAAACGT
TCTTTCGCAAATTCTCTCTGATTTTCCGTAAAAATCTCTAGAACCTTTTT
CCCTGATAATAGAGGGATCAGCTAGAGAACTCCTTCATAATCCACCAGCC
AATATCTGTATAAGGTGCACGCGGTTTTTAAGTCGTAAACTTCATATTGc
ttaatttatgtttttttcgaatatttatatattataagTACATTTCTCTC
ATCATGCTTCTTACAGGGTCACCGTCGAATCGTTTGCGCCACCTGTTGGC
ATGACGACACGAATACAAACAAACCCGTCAATCTTTTGACGGCTGGATTT
GATAAACAGATTTTGGGATGGAAAGTTGGATTTTAA Coding sequence (CDS) from alignment at sc0000089_pilon:831890..836225+ >XLOC_044116 ID=XLOC_044116|Name=XLOC_044116|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000089_pilon:831890..836225+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAAAGAGAAAAGTAACGGCTCACAATCCGGCAAAAACAAGCCACG
CCGACTCCGAATTAAGAGAAGCTCCACCAAAGAGAATAATCGAACGTCTC
AAACTCAAGAAGAAAGTTCCCCTCCGCCGTACCAGAGTAAACTACAAAGT
TTGTTCGCACAAATCGAGAAAGAATTCcaaaaacttcatcatcaaaatca
agaatATGGACAAAGAGAAAAGTAACGGCTCACAATCCGGCAAAAACAAG
CCACGCCGACTCCGAATTAAGAGAAGCTCCACCAAAGAGAATAATCGAAC
GTCTCAAACTCAAGAAGAAAGTTCCCCTCCGCCGTACCAGAGTAAACTAC
AAAGTTTGTTCGCACAAATCGAGAAAGAATTCcaaaaacttcatcatcaa
aatcaagaatTACAcgagaaagttgatattctgaCGGAAAAATATGAACA
GTTAGTTGCAAACGGAGTCGACAAATCGGACAGCAAAATACCGACGTATA
ACGATTCCTACGCTGGTTTGGACACCAATGATTTTTATTCAAAGGGAAAC
AAAAAACAATTACAcgagaaagttgatattctgaCGGAAAAATATGAACA
GTTAGTTGCAAACGGAGTCGACAAATCGGACAGCAAAATACCGACGTATA
ACGATTCCTACGCTGGTTTGGACACCAATGATTTTTATTCAAAGGGAAAC
AAAAAACAATCGGCCAGTTCGTtgatgtcacaaaaattgaagaCAAGATA
CAAAGCCTCCACTAGCAAGCGGCCAGTTCGTtgatgtcacaaaaattgaa
gaCAAGATACAAAGCCTCCACTAGCAAGCTTGTGTCCAGTTTCAAAATAC
CAAACAGTCAAGGAGGAAATGTCTTTTGTCACATGGTACAAAAATATGCG
GGTCACAAAGACGGGATATGGGATTTGGATTCGCAAAAAACAAACTCTTT
TCTCATCGGAACGGCGTCTGCAGCTTGTGTCCAGTTTCAAAATACCAAAC
AGTCAAGGAGGAAATGTCTTTTGTCACATGGTACAAAAATATGCGGGTCA
CAAAGACGGGATATGGGATTTGGATTCGCAAAAAACAAACTCTTTTCTCA
TCGGAACGGCGTCTGCAGATCGAACAGCCAAGTTATGGAATGCAGAGACA
GGTCAATGTTTGATCACTTACATGGCTCACAATGGATCAGATCGAACAGC
CAAGTTATGGAATGCAGAGACAGGTCAATGTTTGATCACTTACATGGCTC
ACAATGGATCAGtGAACTCGATTCGCTTCCACCCTACAGAACCTCTAGCT
TGTACAGtGAACTCGATTCGCTTCCACCCTACAGAACCTCTAGCTTGTAC
AGGTTCAGGAGATGGTAATGCACATATTTGGAAAATTCCCCCTTTATCTG
ATGTTCGAAGTCGCTCTCCTCAAGGAAATTCTGACTCGCCTGCTGTTCAG
GAGATGGTAATGCACATATTTGGAAAATTCCCCCTTTATCTGATGTTCGA
AGTCGCTCTCCTCAAGGAAATTCTGACTCGCCTGCTGGCTCAGGAGAGGA
CGACTTAGAAGACGAAGGAGAAGGAACGGACAATCAACAAATCATGAAAA
TCAAACATTCTTCCGTCGAATTCTCGCAACATGAAGGGCTCAGGAGAGGA
CGACTTAGAAGACGAAGGAGAAGGAACGGACAATCAACAAATCATGAAAA
TCAAACATTCTTCCGTCGAATTCTCGCAACATGAAGGTCCGATAGCGGTG
GCAGATTGGTGGGAGAATGGAAGTCAGATCGTCACTGCTTCATGGGATCG
AACGGTCAAACTGTGGGATGTCGAAAAAGCCACCGCATTTTATACTATGG
AAGGTCCGATAGCGGTGGCAGATTGGTGGGAGAATGGAAGTCAGATCGTC
ACTGCTTCATGGGATCGAACGGTCAAACTGTGGGATGTCGAAAAAGCCAC
CGCATTTTATACTATGGAAGgccACGAGCTGGAGATCACTCACGCCTCAA
CACACAGCAGTCACAAACTGATAGTGACGTCATCACAAGACACAACGTTT
CGCTTATGGGATTTCAGACAGCCTTACATGCATTCTGTGAACGTGTTCCA
GGGCCATACTGAgccACGAGCTGGAGATCACTCACGCCTCAACACACAGC
AGTCACAAACTGATAGTGACGTCATCACAAGACACAACGTTTCGCTTATG
GGATTTCAGACAGCCTTACATGCATTCTGTGAACGTGTTCCAGGGCCATA
CTGACACggtgacgtcagcagttttcaCGACGAAAGCGGATCACGTGGTG
AGTGGAAGTGACGATCGAACAGTTAAGCACggtgacgtcagcagttttca
CGACGAAAGCGGATCACGTGGTGAGTGGAAGTGACGATCGAACAGTTAAG
GTTTGGGATTTGAAAAACATGCGTTCTCCCCTAACGACGATACGCCTCGA
TTCCGCCATTAACAGGTTTGGGATTTGAAAAACATGCGTTCTCCCCTAAC
GACGATACGCCTCGATTCCGCCATTAACAGGTTATCATTGTCACCTGCTC
AAAACATCATCGCCATTCCTCACGATAATCGACACGTGCGGCTTTATGAT
TTGGCTGGTAATCGTATGTCTCGCCTACCCAGACGTCATCGACAGGTTAT
CATTGTCACCTGCTCAAAACATCATCGCCATTCCTCACGATAATCGACAC
GTGCGGCTTTATGATTTGGCTGGTAATCGTATGTCTCGCCTACCCAGACG
TCATCGACAGGGTCACCGTCGAATCGTTTGCGCCACCTGTTGGCATGACG
ACACGAATACAAACAAACCCGTCAATCTTTTGACGGCTGGATTTGATAAA
CAGATTTTGGGATGGAAAGTTGGATTTTAAGGTCACCGTCGAATCGTTTG
CGCCACCTGTTGGCATGACGACACGAATACAAACAAACCCGTCAATCTTT
TGACGGCTGGATTTGATAAACAGATTTTGGGATGGAAAGTTGGATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:831890..836225 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1381-1500:4217 |
| Aaloc | 1267-1380:3856 |
| Aaloc | 1201-1263:3600 |
| Aaloc | 1129-1200:3281 |
| Aaloc | 988-1125:2996 |
| Aaloc | 871-984:2791 |
| Aaloc | 769-867:2471 |
| Aaloc | 679-768:2206 |
| Aaloc | 634-675:2048 |
| Aaloc | 562-630:1864 |
| Aaloc | 415-558:1338 |
| Aaloc | 358-414:1036 |
| Aaloc | 208-354:525 |
| Aaloc | 1-204:1 |
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