XLOC_009572 (mRNA) -

Overview
NameXLOC_009572
Unique NameXLOC_009572
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:481092..487810-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009572 ID=XLOC_009572|Name=XLOC_009572|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6719bp|location=Sequence derived from alignment at sc0000083_pilon:481092..487810- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATGTTATTCA ACAACAGGTTTGTCAAAATAAATCTTTTCCTCTTTCACAATGCGTGGGTA CTTCCGTCCATTCAATTTTTTCCACTAAAAATGAAATGAAAATTGAATTT TTCCATTTTTCCATTTTTGTTTTTAAATTGAAAATTGAAAAATGAAAAAT TGAGATTCAATTTTCAATTTTTTATTTTTCTCCTATGTAGGCGAAGTTTC TGCCCTTCTCCTCGTCGTCAGTGAAGTTTTATCATATGTGCCCCGTTCTG TAGGATTGATGGTGATCTTTCGCGGTCAAGACAATATTTTAGTCCCAAGA TTCTCTTCAGCCCGGCCGGTCACTCGTCCCGCCGGGGAAAAATCTCTGAA GAATTAAAAAACACAAAAAATGAATTCGTTTTTCAATTTTCAATTTTTGT CAGAAAAATGAAAAATGGAGATTTTTGTTCTTGCGGGTGACATTTCTGTC ATCATGTTGTGCCATTCAGGTTGACGGGGGCTTGAAAATGACAAGAGTGC AGTTTGGTTGCTTGCTTGCAGCCATCCTTTATATAACATTTCTATTACAT ATTCACATATTACATATTACACAGTTAGACTCGATTTGTGTTAGTAATAG TATGACTTTGAGGGTAATTTGGGAAAAATAGACGAAAAATAACCCTCATT TTAATCGGGCAATTTCAAAATACGTCAAAATGTATTTTCCCGAAATTTCT AGAGAAGGTCATACTATTCCAGATTAATTGAATGACAGATTTCAACTAAG TGCAAAAGCTTTTGTCTTCCAAACTTACCAGCTTAAACCCGTCCTTCACT ATTTTGCTTCTTGCTCTTAATACGGTTAATAGATGCACAGCATAAACAAA ATAACAAAACAGATGAAAAAGCGAAAAAGTTTTTTGTTGTACAAAAAAGA TTCTAAAGGTTTGAATCCATCCTAGGGCACTGTTTACATCTATTTACATT TTATCGGCACATTTTACGCCGGCTCTTATTGGCTTAATTTTTTCGTCGCT GGCGTAATAAGGGTTGGTGTAAGGGGTCGGAATTAAATTAGGGACGGTGT AACAAAAAATAAGTACTCCCCAGAAAAAAAGTACTCCCGAATTACTTATT TTCCAGGATATAAATACGCCCGGTATTTTTTTCCCCATGAAATTCGTACC CCCTCTGGGAAATTTGTACTCCCCTAATATGCGTCAAAATATGTTGAGAA TTTTGGTTATTTCTTCGTTTTTCGAAATTTGAAGTTTTGGCAAAGGAGTC ACTTTTAATTTTTGTTAAATATAATCCAGTGTTTCAATATGGGACGCCTT ACTGGACTATTCTTGAACCTTTTGGATCTTATAATCTAGCGTTCCATATT TTATTGTGGCTATAAGATTTCGTGAGAATTTCCCTTTTTTCTCAAATATT ACGATCTTAATTGTAAAAAATACCTTAACCCTATTTGGTCTAGCATGGGC CGAGGGGGGGGGGCTGTTTCTGTTCGGAGGTCAAATTATTGGTAGTAGCT ACTGAAATAATAGAGCTTTTGCCATGAAATTTTCTGTAAATTCCTAACTT TTATTTAGCTTCAATATAAAAAAGATTCGACACATAAAATTTTTCACACC TTGAGCATGATAACATCTCTGACAGTAAGGTGTCACAAAAATTGACACTT TTCCAAAACAACTTTTTTATGTCAAATAAACTATCAATTTAGCAAGTAGA ATCTTCAAAACCATCAATTTTACAAGCATGATCTTCAAAACAATTAATTC TACAAGTGAGATCTTCAAAACCTTCAATTTACAAGTAGGATCTTCAAAAC CATCAAATTTACAAATAGGATCTTTGAAACCATCAATTCTACAAGTAGGA TCTTCAAGACAATCACTTCTACAACTTAGGATCTTCAAAACCATCAATTT TACAATAGGATTCAAACCCATCAATTTTAAAGTAGGATCTTCAAAACCTC CAATTTTACAATATAGGATTTTCAAATCCATCAATTGTACAAGTAGGATC TCCAAAGGCATCAATTCTGCAAGTAGGATCTTCAAAAACATTAATTTTAC AAATAGGATCACCAAAACTATCTATTTTTACAAACAGATTTTTCAAAACC ATCAACTTCCCAAGTAGGATCCTAAAAACCATTATCATTATTCCAAGTAG GATCTGCAAAACCATCAACCTTACAAATAGGATCTTTAAAACTATCAATC ATACAACAGAACAACGGCAGCAAGAATCTTTAAGACCATAAATTCTACAA CAAAAATCTTCAAAACCAACCCTTCTACAACAAGAATCTTCAAAACCATC ACTTCTACAACAAGAATTTTCAAGACCGTCACTTCTACAACAAGAATTTT CAAGACCATCACTTGTACAACTAGGATCTTCAAAACCATCCATTTTAAAA ATAGGATCTTCAAAACCATCGTGTTTAATTAAAAGCAGGATCTTCAAATC GTCAATTCTAGAAGTAGGATCTTCCAAACCATCAATTAAACGTAAAATCC TCAAAACCATCTATCTTACAAATAGAATCTTCAAAACCATGTAGTTTACA AGTAGTTACTTGATTCTATAATTAGTTTCTTCAAAACCATCAATTCTAAT TGTAGCATAAGTTATCAGGTATTTAAAGAACAACTCTCTTGCAAAAATGA TCCTTTAAGGTGTGTGTATAGTTTCTGTTGGGGGTGTGAAATATACATTG CCCCCACATTGCCTTTTTACGCTAGCTTTGTTGAAGCCCAAAAAGGGCAT TTAGATGAAAGCGTTCTTTCATGTCTATGCGGCTGGTAGGATATGAAAAT TTCATCCCACTTTTTGGTAGGGTATGAAATTTTTTTGAGAATTTTTGATT GGGTACGAAAACAAAAATATCACCGAAAAAATCCCTTCCACCCCGGTATA TGCTATACAAGTTTTACAGGATTTCTTTTAGAAAAAAAAATTGAGACACA AAATTAGAGGCTTATTTTAAAGCTAAAACTTTACCCTCGGGGCGGGGGTA AAGGGTTTCCGATGGGGAGTACTTTTTTTTCTGGAGGGGATGACAATTTC CTGGGAGAAATGTACTTCCGGGAGTATATTTTTGAACTCGCCAAGCTTTA AGCTTTCCAAAGATGTAAAAATAACGTTTATACAACCTATCTATAAAAAG TTGAATTTTTCTTCTTCATTTTTTTTCATGTTACCTTATCGGGGAAAATA ATTTTGGAGTTTTATTTAGTCGGGTTTTTTTTCGTCGGGGAAAAGTTTCG TCACCTAGAGGTATTTTCGTCACTTTCCCCCGACCAAAATTTTAAATTCG TCACTTTTCCCCGACGAAATTTACAATTTAGTCACTTTCACCCATCTAAA TTGTCCAAATTAAATGGTTTCCTTTAGTAGCTCGAAAAAAGATCTTGTAA TTCGACGTTTAAAGCACTAATTTTGGTTAATAAAGGTGTAAACAATTTAG ATTTGAATTTTGGTTGGGGTTTAAAAAATTGGGTAAAAGTTTTGGTCGGG GATAAAAAAATCGGGTAAATTGTTTGGTCGGATGATAAAATATCGGGGAA AAATTTCATCTTGGGAAAATTTCGTCACTTTCCCCCGACATTTTTTTCCC CGATAAGGTATTTTCAAATTTTACGGAAAAACTAACAGTAGATTAATAAG CTCCTTCCTACTTACATAGCAAACTTTTTAAGATTAGCATTGGTTGAGAA GTAACAAGTAAAAGCGCAAAATTTAGTGCACACTTATCGTGAATAGACTT TAGATTCAAGCTTCCAGTTCCTTAATGGGAATTTTAGCTTTCAGCTGGTT GGAAAAATTTCCTGATTTGAAGGTAACCAACTAATTCAATCTTACCAATT TTGATTAAAGATCAAGTTTTCAATCGTTTAAAATGTTTAGATGGAGACAT TTTTACTTTTATCCATATTTTGAAATGTGGACTTTTCACTGGTTGCAAAG TTACAAATATGATTTTGTGGAAAGATGGTAAGGTAACCATTCTAACTTTC CAATTGATGCGAAAAGTCCTATTTCCATTGGAAAGACATGGAAAATTGAA ATTCCCACGTATTTCCACCTATTCGGAAGATGGACTTTCTACTTATTAGA AAGTTGGAAAGGGAATCTTGTGTAATCTTTCCAATCGACGTGGAAAGACG TGGAAATGTCACCTATTTAAAAAATGGTCAAAAAAATGGTCCAAAAAGAT TCCAAAGCTCTATCTCAAACTTGCAGGGGATCGAAAATGAATTCCAGATA AAGAGAGTTTGAGACAAAATAAAAACTTTCTTTTAAAGCCTGGATTCCCA TCAAAATGAAGTTGGACTGTATAAAAAAGGTAACGAAAAGAATAATCAAG CATTCCGGATGAGAGGAAATAGGAAATATTCAAGCCATCTTTGTGGCTCT TGTTCTATCAATGTTATTAGTACCTTATTCTCATATACAACATTTCAAAC CTTGTAAGATGTAATAAAGATGTTATAGGATAATTTGCATGAACTACGTC ACCCTACTGGACTGAGCTTCACTCTTTGTCAAACCCCCGTCGAACCTGAG TGACGCAACATGATGACAGAATGATGTCACCCACAAGTACAAAATAATGG AAAATCGAAAATCGAATCTCCATTTTTCATTTCTCTGTTTTTGATTTTCA AAAACAAAAAATGGAAAATTGAAAAACGAATTCATTTTTTTTTTTTTTAT TTCTTCAGAGATTTTCCCCCAGGGCTGAAGAGAATTATGTGACTAAAATA TTGTCTTGACCGCGAAAGATCACCATCGATCCTACAGAACGGGGCACACA TGATAAAACTTCATTGATGACGAGGAGAAGGGCAAAAACTTCGCCTACAC AGGAGAAAAATAAAAAATTGAAAATTGAATCTCAATTTTTCATTTTTCAA TTTTCAATTTAAAAACAAAAATGGAAAAATGGAAAAATTCAATTTTCATT TCATTTTTAGTGGAAAAAATTGAATGGACGGAAGTACCCACGCATTTTTC ACTATCTTACTAATTTTTTTGTGTTTTTGTTCAGGATAGTGGCTTTTTGA ACTTTCATTTTCACTTTTAGACTTTGTAAGTTTTTATAATTTTGAAAAAA AAATTTGACATGAATTTTTTCTCTTGTCATTTTATTAGAGCTATGATACA TATAACTTTTGGTTATGAGCTAGCGGTTTTCACAATTCATGTAACTTTAT ATGAACATCGTTTAGATTAAAATTTGTGTGTTTTAAAATGCATTTTTTCT CTCAGTTATCTATTTGTGGGAACATCTCATTTCTTTTCTCTTCAATAACT TTACTTGTTTGTGCGGACTTAATCATTTTTTTTTTTACTAAATGGGTTAT TCATCCTCGAAATAATTTCATGATAAGTGTTTTTTGTCTCTTGAGGCGAT AAGCCTACTTTCTTTTTATAAAACACATGAAAAAATCGATCATTTTTTTA TATGTGTGTTGTTCCATGTTTATCTCACAGAAAAATAAGAAATCAGAGAT ATGATGAGAAAAAGTTTGTCTAAAGTTTTAAATGTAGAGCAAACGTATTT GATTTAAAAATATAGTAAATGTATTTTGAACTTCTTATTTCTTTTGATTC AAACTGATGATTTATTTGTTTATATTTTTAGAGCAAGCAACGACCAGCCA TGTTAGATCTGCGTCAGCGACCACTAGAACAACGAAAACCAAGTAACTTA TTGATATCTCGACGACACTCAACGAATTCTACAAATTTGAATAGTTTGGC TTCACCATCATTCACCAAAACAAATCCGCTCTCACCATCTTCGAGCAGTT TCTTTCCAATGCCATCGTCACCTAAAGACCCCTTTTTGAACGGTTGTGGT TCAACCTTAGCATCTGCTCTCAACATGCGGGAACGTGCTCAAAGTGCAAG CTTCCAAGAAGAACTCGACGCACAACACCGTAAACGTAGCGGTACAAACT CAAGCCGTTACAAGACAGAACTTTGTCGTCCATTCGAAGAAAATGGTACT TGTAAATATGGAGACAAGTGCCAATTTGCACATGGCTATCACGAACTTCG TGGCTTAAACCGTCACCCTAAATACAAGACCGAATTCTGTCGTACTTATC ACACTATCGGATTCTGTCCATACGGTCCGCGTTGTCACTTCATTCATAAT GATGAGGAGAAACGTTTGGCCCAAGCAAGCACTGGTCGATCTGTTTCTAT GTCCAGCATGGATTCAGCTCCCTCCTCCCCAGTCATTGACTTCGCTCCTT CACCATTCAGCAACACACCACCTACTTCCCCTGGAGTTGGAGACGTCTTT GTTTTTGACGAACCAACTGCTCAACAAAACCTTCCATCCATGAAATCATC CCTGGCAAGTATGTCAACCATTCCGGAGATATCATCTCACCAGTTTGTAC CGAACCACATCACTCGTAGCATCTCAGTTTCATCAGCTCTTCCTTCCAAA ACACCTTCACCACCTAACCTCACTATTTCAAGCTTAATCACTGAAGGCAC ACGGATCGAATCCAGACCAAACACTTTCCAACCCATTCAAATGAAATTGG ACGAACGCAACATTTTGACTCCATCTGATTCTGGATCATCCAACCCACCT TCTCCTACCGACTCTTTGGATGGCTCCAACCGACGTCGCTTGCCTGTTTT TGGACTCATGAAACAATAA

Coding sequence (CDS) from alignment at sc0000083_pilon:481092..487810-

>XLOC_009572 ID=XLOC_009572|Name=XLOC_009572|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000083_pilon:481092..487810- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATGTTATTCA
ACAACAGATGTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATG
TTATTCAACAACAGAGCAAGCAACGACCAGCCATGTTAGATCTGCGTCAG
CGACCACTAGAACAACGAAAACCAAGTAACTTATTGATATCTCGACGACA
CTCAACGAATTCTACAAATTTGAATAGTTTGGCTTCACCATCATTCACCA
AAACAAATCCGCTCTCACCATCTTCGAGCAGTTTCTTTCCAATGCCATCG
TCACCTAAAGACCCCTTTTTGAACGGTTGTGGTTCAACCTTAGCATCTGC
TCTCAACATGCGGGAACGTGCTCAAAGTGCAAGCTTCCAAGAAGAACTCG
ACGCACAACACCGTAAACGTAGCGGTACAAACTCAAGCCGTTACAAGACA
GAACTTTGTCGTCCATTCGAAGAAAATGGTACTTGTAAATATGGAGACAA
GTGCCAATTTGCACATGGCTATCACGAACTTCGTGGCTTAAACCGTCACC
CTAAATACAAGACCGAATTCTGTCGTACTTATCACACTATCGGATTCTGT
CCATACGGTCCGCGTTGTCACTTCATTCATAATGATGAGGAGAAACGTTT
GGCCCAAGCAAGCACTGGTCGATCTGTTTCTATGTCCAGCATGGATTCAG
CTCCCTCCTCCCCAGTCATTGACTTCGCTCCTTCACCATTCAGCAACACA
CCACCTACTTCCCCTGGAGTTGGAGACGTCTTTGTTTTTGACGAACCAAC
TGCTCAACAAAACCTTCCATCCATGAAATCATCCCTGGCAAGTATGTCAA
CCATTCCGGAGATATCATCTCACCAGTTTGTACCGAACCACATCACTCGT
AGCATCTCAGTTTCATCAGCTCTTCCTTCCAAAACACCTTCACCACCTAA
CCTCACTATTTCAAGCTTAATCACTGAAGGCACACGGATCGAATCCAGAC
CAAACACTTTCCAACCCATTCAAATGAAATTGGACGAACGCAACATTTTG
ACTCCATCTGATTCTGGATCATCCAACCCACCTTCTCCTACCGACTCTTT
GGATGGCTCCAACCGACGTCGCTTGCCTGTTTTTGGACTCATGAAACAAT
AAAGCAAGCAACGACCAGCCATGTTAGATCTGCGTCAGCGACCACTAGAA
CAACGAAAACCAAGTAACTTATTGATATCTCGACGACACTCAACGAATTC
TACAAATTTGAATAGTTTGGCTTCACCATCATTCACCAAAACAAATCCGC
TCTCACCATCTTCGAGCAGTTTCTTTCCAATGCCATCGTCACCTAAAGAC
CCCTTTTTGAACGGTTGTGGTTCAACCTTAGCATCTGCTCTCAACATGCG
GGAACGTGCTCAAAGTGCAAGCTTCCAAGAAGAACTCGACGCACAACACC
GTAAACGTAGCGGTACAAACTCAAGCCGTTACAAGACAGAACTTTGTCGT
CCATTCGAAGAAAATGGTACTTGTAAATATGGAGACAAGTGCCAATTTGC
ACATGGCTATCACGAACTTCGTGGCTTAAACCGTCACCCTAAATACAAGA
CCGAATTCTGTCGTACTTATCACACTATCGGATTCTGTCCATACGGTCCG
CGTTGTCACTTCATTCATAATGATGAGGAGAAACGTTTGGCCCAAGCAAG
CACTGGTCGATCTGTTTCTATGTCCAGCATGGATTCAGCTCCCTCCTCCC
CAGTCATTGACTTCGCTCCTTCACCATTCAGCAACACACCACCTACTTCC
CCTGGAGTTGGAGACGTCTTTGTTTTTGACGAACCAACTGCTCAACAAAA
CCTTCCATCCATGAAATCATCCCTGGCAAGTATGTCAACCATTCCGGAGA
TATCATCTCACCAGTTTGTACCGAACCACATCACTCGTAGCATCTCAGTT
TCATCAGCTCTTCCTTCCAAAACACCTTCACCACCTAACCTCACTATTTC
AAGCTTAATCACTGAAGGCACACGGATCGAATCCAGACCAAACACTTTCC
AACCCATTCAAATGAAATTGGACGAACGCAACATTTTGACTCCATCTGAT
TCTGGATCATCCAACCCACCTTCTCCTACCGACTCTTTGGATGGCTCCAA
CCGACGTCGCTTGCCTGTTTTTGGACTCATGAAACAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009572XLOC_009572-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:481092..487810 -
Properties
Property NameValue
Aaloc58-1095:1039
Aaloc1-57:6720