|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1025805..1028066+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035546 ID=XLOC_035546|Name=XLOC_035546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2262bp|location=Sequence derived from alignment at sc0000043_pilon:1025805..1028066+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgACCAAAAATATCCTCAGGAAGGGTAAAGATACTCAAAATCATTT
GAAATACTTAAGAAATGCTTTCGCTGAATCGTGTCAGAACATTGATGCTT
TTTTGGAGGTTGACAATGCCCTTTACACACTTGTTGGGTATTTAACTGGC
AACAATACAACATTACAATTAGAAGCTGTTTGGTGTTTAACAAATATCAC
TGctaatgaaaatcaaaatattgaaacctTCGTGAAAGCTACTTCAGCAT
ACTTGATTACTTTCTTGAAAAGTGGGAGTGTTCTCTTACAAGATCAAAGT
GCATGGGCATTGGGTAATATGGCAGCTGATAGCCATAACATTAGGGAAAT
ATTGAAAGCTCAAGGGATTGTGAAGCCACTCACTGAACTGGTTGAggtaa
ttgtttttattcttttgatatGGTATGATATGACCAGAATTCACTCCTTG
CTTTATCATTATTAAATCATGCCCATAGTTTGTTCATATATAaatattcg
acaagaaaaatcgaaaaatcgtaaaaaCAGTTAAGTATGATGTCATCAAG
CGGTACTGGAtttttttcgactttcaatttttcagcattaaagcattaaa
gatataggaaaaataaatatagAGAAAAATTAGGGACCAGATTCCAGCTA
TCCCTGTTATTAAACTTAATTGTTTATAAAATGAGGTAGGGTAGAAAGAT
TATAGTCACCAACTGAAAAACTTctgaaagaaataaagaactcaCAATTG
CaattatctttgttttttagAGTGATGTTGGAGAAGTTGTCAAATCATCA
CTTTTCGCTATATGCAATCTTTGTAAAAGTTTACAATCTTTTGTACCACT
GGTCTTTACTCCAcgattcatcaaaatcattttcaaactaTTAAATTGTG
CTGACACAAACATTTTCATAGTTGGGGACATTGCTTGGCTTCTCGTTCAT
TTTTCTTGGAATAAATCTGGTTGTAATTTGTCGATGGAGTATgattttat
caatgttttgatgaaAAGGGTGAAACTGTTGTCACCTGGCACCCAGGAAT
ATCTTTTTGTTGTCCTTCCAAGCCTTAGAGTGATAGGTataatgaatttt
tattaatcAGAGTCTCTCAGATATAGCTATTATGGTCAACTGATGCTATC
ATTACTTTCACAAGATAAAACATCTTCCTGAAGACCGAGTTCTTGTCATT
ATTGAATGGATTAAATTTTGTGTGAATTTTCACAGATTTTTAGGtcaatt
ttgcaaaatattgtcCTCGCGAAAAATTTGTAATCAAGATTTTTGTTGAA
GTGTAAGAAATCGGGAGAAAAAGATACCTACTCATgcgaaaattttacat
tttccaTTCGAGAAAAAAGTTAACGCAAAATTTCATCCACTTGAGGTATC
CATGTCACATTCATAATGAAAAGTGGCTTTTCggtgataaaaaaattatg
tgTTGTCACTTTAGGGAACGTTATTGGTAACCAAGAAGATGTTAACAATT
TGCAATTGGACCCGTCTTTATTTGACGATATTGTTCAAACAGCAAATACG
ATTTTATTAAGATTCCGGGCTAAGGAATATGTGATCAAAGAATGTCTATG
GATGGTCAGCAATCTGTTTTCATGTCCCATGGAAGATCACCTTTCGAATG
AAGTTGTTTTGAGAGACgtacaaaaagttgtttttaataTCGTGTCCAAT
TTTAAGAGTAGTAATCGAGACATTCAGAAAGAGGTAAAGatgtttacact
tttttttaaagaacatcaaattttttaagcctttggatgttcttaacatt
ttgaattttaagccttaaaattttcttaacatgttcttattttcgccatt
ttctgaaaagccttaaaatgtttttaatttgttcttaacattttggccat
cgaagccttatgttcttgtatagtttgttcttataaaaaaacgtgtacat
aatTTCTTACAGGCTGCTGTTTGCTTTTGTAATCTTTCACACCAACCCTT
GATGCAACatttcaaagatattttaacatctGAAGATATTGTGCTTATTT
TCATGGACTTCTTAAGAATGGATGATTTAGATCTGATCTGGATTTCATTG
tcatattttgatttgttgCTGAATgaggataaaatgaaaataatctttCA
GAAACATAATGGACTCTCTTATTTGGAAGCGTTTCAACACCACCcaaatg
aaaatattagaaGCAAATCATTTCAGGTTTTACAAACTTTTGGAACAGCG
CATCCATCTTGA Coding sequence (CDS) from alignment at sc0000043_pilon:1025805..1028066+ >XLOC_035546 ID=XLOC_035546|Name=XLOC_035546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2562bp|location=Sequence derived from alignment at sc0000043_pilon:1025805..1028066+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgACCAAAAATATCCTCAGGAAGGGTAAAGATACTCAAAATCATTT
GAAATACTTAAGAAATGCTTTCGCTGAATCGTGTCAGAACATTGATGCTT
TTTTGGAGGTTGACAATGCCCTTTACACACTTGTTGGGTATTTAACTGGC
AACAATACAACATTACAATTAGAAGCTGTTTGGTGTTTAACAAATATCAC
TGctaatgaaaatcaaaatattgaaacctTCGTGAAAGCTACTTCAGCAT
ACTTGATTACTTTCTTGAAAAGTGGGAGTGTTCTCTTACAAGATCAAAGT
GCATGGGCATTGGGTAATATGGCAGCTGATAGCCATAACATTAGGGAAAT
ATTGAAAGCTCAAGGGATTGTGAAGCCACTCACTGAACTGGTTGAgatga
tgACCAAAAATATCCTCAGGAAGGGTAAAGATACTCAAAATCATTTGAAA
TACTTAAGAAATGCTTTCGCTGAATCGTGTCAGAACATTGATGCTTTTTT
GGAGGTTGACAATGCCCTTTACACACTTGTTGGGTATTTAACTGGCAACA
ATACAACATTACAATTAGAAGCTGTTTGGTGTTTAACAAATATCACTGct
aatgaaaatcaaaatattgaaacctTCGTGAAAGCTACTTCAGCATACTT
GATTACTTTCTTGAAAAGTGGGAGTGTTCTCTTACAAGATCAAAGTGCAT
GGGCATTGGGTAATATGGCAGCTGATAGCCATAACATTAGGGAAATATTG
AAAGCTCAAGGGATTGTGAAGCCACTCACTGAACTGGTTGAgAGTGATGT
TGGAGAAGTTGTCAAATCATCACTTTTCGCTATATGCAATCTTTGTAAAA
GTTTACAATCTTTTGTACCACTGGTCTTTACTCCAcgattcatcaaaatc
attttcaaactaTTAAATTGTGCTGACACAAACATTTTCATAGTTGGGGA
CATTGCTTGGCTTCTCGTTCATTTTTCTTGGAATAAATCTGGTTGTAATT
TGTCGATGGAGTATgattttatcaatgttttgatgaaAAGGGTGAAACTG
TTGTCACCTGGCACCCAGGAATATCTTTTTGTTGTCCTTCCAAGCCTTAG
AGTGATAGAGTGATGTTGGAGAAGTTGTCAAATCATCACTTTTCGCTATA
TGCAATCTTTGTAAAAGTTTACAATCTTTTGTACCACTGGTCTTTACTCC
AcgattcatcaaaatcattttcaaactaTTAAATTGTGCTGACACAAACA
TTTTCATAGTTGGGGACATTGCTTGGCTTCTCGTTCATTTTTCTTGGAAT
AAATCTGGTTGTAATTTGTCGATGGAGTATgattttatcaatgttttgat
gaaAAGGGTGAAACTGTTGTCACCTGGCACCCAGGAATATCTTTTTGTTG
TCCTTCCAAGCCTTAGAGTGATAGGGAACGTTATTGGTAACCAAGAAGAT
GTTAACAATTTGCAATTGGACCCGTCTTTATTTGACGATATTGTTCAAAC
AGCAAATACGATTTTATTAAGATTCCGGGCTAAGGAATATGTGATCAAAG
AATGTCTATGGATGGTCAGCAATCTGTTTTCATGTCCCATGGAAGATCAC
CTTTCGAATGAAGTTGTTTTGAGAGACgtacaaaaagttgtttttaataT
CGTGTCCAATTTTAAGAGTAGTAATCGAGACATTCAGAAAGAGGGAACGT
TATTGGTAACCAAGAAGATGTTAACAATTTGCAATTGGACCCGTCTTTAT
TTGACGATATTGTTCAAACAGCAAATACGATTTTATTAAGATTCCGGGCT
AAGGAATATGTGATCAAAGAATGTCTATGGATGGTCAGCAATCTGTTTTC
ATGTCCCATGGAAGATCACCTTTCGAATGAAGTTGTTTTGAGAGACgtac
aaaaagttgtttttaataTCGTGTCCAATTTTAAGAGTAGTAATCGAGAC
ATTCAGAAAGAGGCTGCTGTTTGCTTTTGTAATCTTTCACACCAACCCTT
GATGCAACatttcaaagatattttaacatctGAAGATATTGTGCTTATTT
TCATGGACTTCTTAAGAATGGATGATTTAGATCTGATCTGGATTTCATTG
tcatattttgatttgttgCTGAATgaggataaaatgaaaataatctttCA
GAAACATAATGGACTCTCTTATTTGGAAGCGTTTCAACACCACCcaaatg
aaaatattagaaGCAAATCATTTCAGGTTTTACAAACTTTTGGAACAGCG
CATCCATCTTGAGCTGCTGTTTGCTTTTGTAATCTTTCACACCAACCCTT
GATGCAACatttcaaagatattttaacatctGAAGATATTGTGCTTATTT
TCATGGACTTCTTAAGAATGGATGATTTAGATCTGATCTGGATTTCATTG
tcatattttgatttgttgCTGAATgaggataaaatgaaaataatctttCA
GAAACATAATGGACTCTCTTATTTGGAAGCGTTTCAACACCACCcaaatg
aaaatattagaaGCAAATCATTTCAGGTTTTACAAACTTTTGGAACAGCG
CATCCATCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1025805..1028066 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 982-1281:1963 |
| Aaloc | 715-981:1467 |
| Aaloc | 397-711:771 |
| Aaloc | 1-396:1 |
|
