XLOC_035696 (mRNA) -

Overview
NameXLOC_035696
Unique NameXLOC_035696
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000018_pilon:1004583..1005602+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035696 ID=XLOC_035696|Name=XLOC_035696|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1020bp|location=Sequence derived from alignment at sc0000018_pilon:1004583..1005602+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAATCTATACTACAATTATGCATTTGACGGAAATGGAATTTATTAGGGC TGTCGTGCTCAATTCCAAGCGAACAAAACCTTTGGTGGACTCGCTTTTGA CGTTACAACACGTTaaaaaaaGCCAATTTCCCGGATTTAGAAGCCAAATT GGTCACTTGTTGGATAAACTTGGAATATATTTAAAGCGACCAggtacttt ttcaatttttcaatgaaaccaATGACAATCTCTATCTTGAATATATTATC AGGTTCTTCTAATCTTTTTACCGTTAACGAGTAGTGACTCTTGTCATCTG ATCTGGCATATAAAACTATATCCttatatttgtttttgataatttttttt cctttttatattGGCAGCTGTAAATGAAAGTTCCAAATCAACAGAAAATT CAACAGAAGGTACAGATAATTAGGGGAATTTCAAGGGGAGCGTATTCAAA AATGGGCACTCTCTAAATCGACACTTATTTGAGGAAATACGTTCTAACCC TGTGATTACGAAAAAGGAATAGATTCTctacattttcttattttgtgtGC AGATTTGACCCTCAGAGAAATTGATAGAACGagaatgaaacaaaaagaaC TGCTGGATCGCCTGCATCCCTATTCAATGAAGAGGCAAAAAGCAGTTTGT AAGTGAACTCTCCTCCTTTATCAGAATAATCTTTTGTCATGTTATATATG TTATAATGTTAAAAATGTCGTTGTAAAATGATTCAAATTCCAGTCACATT GTTAGGGAATAGAGATGAAATGAACCATTCATGGGAAAACCTCAAATAGC AACCaacgtttttttaatttctactTTAGTTCAATGGAAACAGAAGAATT TACTTAGAATGGACGACTTCATTAAGATTGGAAGTTCCGATTTTGCTTTG AACGTAGCTTGTGTTCTAGAAGAGCCAGAGAAATTTCCAGAATTTAATAA CCTCAAAGTTACTGATTTGCGAAATATGTACGTTTTTCATTGTCATGGGG AACGCAGCACGCTCGTCTAA

Coding sequence (CDS) from alignment at sc0000018_pilon:1004583..1005602+

>XLOC_035696 ID=XLOC_035696|Name=XLOC_035696|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000018_pilon:1004583..1005602+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAATCTATACTACAATTATGCATTTGACGGAAATGGAATTTATTAGGGC
TGTCGTGCTCAATTCCAAGCGAACAAAACCTTTGGTGGACTCGCTTTTGA
CGTTACAACACGTTaaaaaaaGCCAATTTCCCGGATTTAGAAGCCAAATT
GGTCACTTGTTGGATAAACTTGGAATATATTTAAAGCGACCAgAAAATCT
ATACTACAATTATGCATTTGACGGAAATGGAATTTATTAGGGCTGTCGTG
CTCAATTCCAAGCGAACAAAACCTTTGGTGGACTCGCTTTTGACGTTACA
ACACGTTaaaaaaaGCCAATTTCCCGGATTTAGAAGCCAAATTGGTCACT
TGTTGGATAAACTTGGAATATATTTAAAGCGACCAgCTGTAAATGAAAGT
TCCAAATCAACAGAAAATTCAACAGAAGCTGTAAATGAAAGTTCCAAATC
AACAGAAAATTCAACAGAAGATTTGACCCTCAGAGAAATTGATAGAACGa
gaatgaaacaaaaagaaCTGCTGGATCGCCTGCATCCCTATTCAATGAAG
AGGCAAAAAGCAGTTTATTTGACCCTCAGAGAAATTGATAGAACGagaat
gaaacaaaaagaaCTGCTGGATCGCCTGCATCCCTATTCAATGAAGAGGC
AAAAAGCAGTTTTTCAATGGAAACAGAAGAATTTACTTAGAATGGACGAC
TTCATTAAGATTGGAAGTTCCGATTTTGCTTTGAACGTAGCTTGTGTTCT
AGAAGAGCCAGAGAAATTTCCAGAATTTAATAACCTCAAAGTTACTGATT
TGCGAAATATGTACGTTTTTCATTGTCATGGGGAACGCAGCACGCTCGTC
TAATTCAATGGAAACAGAAGAATTTACTTAGAATGGACGACTTCATTAAG
ATTGGAAGTTCCGATTTTGCTTTGAACGTAGCTTGTGTTCTAGAAGAGCC
AGAGAAATTTCCAGAATTTAATAACCTCAAAGTTACTGATTTGCGAAATA
TGTACGTTTTTCATTGTCATGGGGAACGCAGCACGCTCGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035696XLOC_035696-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018_pilongenomesc0000018_pilon:1004583..1005602 +
Properties
Property NameValue
Aaloc334-522:832
Aaloc238-330:555
Aaloc196-234:370
Aaloc1-192:1