|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:387154..391301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035227 ID=XLOC_035227|Name=XLOC_035227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4148bp|location=Sequence derived from alignment at sc0000011_pilon:387154..391301- (Clytia hemisphaerica_ch_hm2_pilon)
AAACAGAAGCGAGAGAAGTTTAAACGGCGAACGGTGGTAGATGAGATAAA
AGCAATTCTTCAACAGTATCCTGACGATGGCCAAATCTTTAAAGTAAGAT
ATAAGTATTTAAAGAAAGTTCTAGGTATCATAGTAATTATTCATAAAGAA
AATTGTAGGTGTCATAGATTTTGGCCGTTTTATGGTTACACGAGAAAAAA
GGACAACTAGATTATTGCAAACTTCCATTGCTTTCAGGGAGCGTGTTAAA
AGTTCACGAGTTTACATAAACCCGGGTAAATGCTTTAACCAAACAAAATT
TTTGTTTTTATTGTCACATGGGTATTTTTTTTCAGTCATAGTAAAGGCTC
ATTAGGGGGTCATTAGATAATGCTCTGCCTTCCTCTAATCATTGCTACAC
GTTTTTTTATAAAAACATACAGATGTTCTTAACTTTGTGAGTTTTAAGCC
TAAAAATGTTCTTAACATGTTCTTATTTTGACCATTTTGTGACAATTTTC
CCAAGAAGTAGGGTGTTTTTGAGTCCACAAAGCCTTAAAATGTTCTTGAG
ATTTTGGTCAGCGAAGCCCTATGTTTTTACATAGTTTGTTCTTATAAAAA
AACGTGTAATTTATCAATCAATCATTCGTCCACAATAACTTCATAGGAGA
TCATACAGAATGCTGAGGACGCAAGAGCGAGCGAAATAGTCTTCGTTTTT
GACAAGAACGTCGACCAAGATGCAGATCTTCATTTCTCAGAAGAAAAGCT
GCGCAGATATCAGGTAATTACTCTTTCTAAATAAGCCATCGATTAAAATA
AAAAAAGAAAGGAAATGAAATCATATGAAAGCCATTATTGGTATAGTAAA
GATTTCGGGATTACTACTAAGTTTGAGTGTTGATGTTTTCTTTAATGATT
TTTGTTTTCAGACGTATTTTAGTTCCTCACTAATGGACGCTGGAGTATCA
AGAATTTCTCATAAACATTGCTTATGTTTAGTTTTGCAAATGGGCTTCCT
TGCAAATTCTTCTCCTTGCCGAGTCCTAAAGTGGCCTGTCTTGAAATACA
CGCTTTTTTTATAAGAATGGTGTTTTTTTCATTTCATCATGAATATTCTT
GACTTTTTGGCGAAAATCATCCAAAAATATTCTTACGGTATTCTTAGGTT
AAGATCGAAATTGGCAATCTACAGGTTAAAATGCATTAAAATGGCATTCT
TAGGTTCAGTTGCTAAATTCCATGATGGTGATATTCTTACCATACTCTTA
ATTTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTGTATTTTTATT
AAAGTTTTTCTTTATTGTATTTTTTTTTAGATTCCATCTTTATATGCTTA
CAACAACGCGTCCTTTACACCAGCGGATTGGGATGGTGTCATCTCATTAG
GAATAAGTGGAAAGACCAAGCAAGCATTGAAAGTTGGACGCTTTGGGCTT
GGGTTTAAATCAGTTTTTCATTTGACAGGTGAAGAAGTTTATTTCCCATT
CACTCTTGCACTCTTTTTTTTTCTTTTGTAAGGACACTGAGACTTGATGA
GCTTGAGCTTTTAAATATACTTCACTTATTTGTCACAAAGTAATAGATTG
ATGACAATTTCGAAAAACAAACAAAAATTGTTTTATTACAAGTTAACGAC
GAGCCAAATCAAATAAGAGCTTGCGAAAACTTCAAGTTGTCCCAAAGCTG
GGAAAATTCATTACTCTAATTTTGTTTTGAAAATTGAATCAATGAGACAG
GGATGTAGAACATAAGTTGTTTTCACGGACATTTTTGAAGTATTATTCCT
GTTATTTTGTCACACAGACTTGCCATGCGTTGCCAGTGATTCTACATTCG
CTTATCTCGATCCCATGAAAGAGACGTTTAAAGAAGAAGTCGAAGTTTTG
GATTTTGATGAACCAACCGACTCCGATGCTGATTTCCACGATTTCAAATC
CTTCCAAAGATTGGGTGAAAAATTTTGGAGAAACGAGAATGGAGTTGAAG
GTGAGATTCTATAGGAGAGATTACAATTTACTGTTGTTATTTTGAAAAAT
AAGAATTAGATATTCCAGAGAGAAAGATGTTACGCATTCAAAGTTAATAA
GTACAAAAAAATCCTTTCCCCATGTTGATACGAAGTAATTGAGATCGTGT
GAAAAAAGATTTCATTACGAGCCTTCTCTCAATTATCGTGTTGCTTTGAA
GTTCATCTAGCAATGCTTTTGTTACCCGGACTGGTAACTTGGAAATTTTT
TCGTAGCCAAAGCTCTAATCAACGGGGATAGAAAAAAAATACCAACCAAG
ATTATGTAGGGGTTCCATTGCTTTCAGCGTACCAATAAAATTAGTTTTAA
AATTAAAATTCGATTTTTGTGGACTGTTCATCAAGTGGGTATGGTCCCAC
TGACTCAGTGGCACAGATTCTTTATAATGTGCGGCCTTTTTCAAATTTAC
ATTTCATTAGGTACATTGTTCCGTTTGCCGCTTCGCTTGAAAGCTTCCAA
TCTTTCATCAGTGATCTATGACGAAGAGCGAATCAACGCATTACTTGAGA
GATTCAAAGAAGAAGCACACACCACAATGATCTTCCTCAAACACGTCAAA
AGCATCAAAATCTACACTATTGAAAATGGTTCGACAGTCATGAAGGAAGT
TTACTCAGCTAAATTGACAGAGCATAGCCAAGAATATCAATCTCTCAAAG
TTGATTTTGTGGAGCAAATCAACCGTTTGGTAGACGAGGAACAAGATTTT
GCGACCATCAAACAATTACGTCATTTTCTTGAAATCGAAGTGGAGAGTTT
GGACGAAGATGAAGAAGAAGAAGAACAAATTTACGAATACGCTGTTTGTG
AAAGATATGGGTACGAAGGAACGAATGAAGATTTCATCTCTCTGATGTAT
GATGAAGAATTATCGTATGTACCATTGGTTGCCATTGCTTACCCTATCAA
TCAAGACTTGGACGAAGGAGGTCACGTGTTTTGCACGCTACCGTTACCGC
TTCATTGCCGAAAAATGACTGGCATGCCAGGTGAGTAAGAGTAGTAAGGG
ATGTTGAGAGGGGACGCTACTGCCATGGACATAAAGACGGGGAACTGGAT
TCATGATTCCACAATTAGAAGCGAAATATAAAAAGCCTTGTGATGTGCAA
CCAAATCAAAATAAAACATAACACATTTTTTTTTTTGAAACGATATTTCG
GCCTCAAGTTGTGATGAATTAGAAAATATACCACCTACTTACACTTAACT
CGCAGTGCCGTAGGAAGCGTTTCCATATTGGGGGGGGGGGCTGAAGTTTA
GTGACGCCGCGAGGGCCAACAATGGTTTGGCCCGAGGGGAAAAATTTTGA
AAATTTGAGCTCTAGATTGCTTGAAAATGCACTCAATTGTGACAATTATG
ACAAATTAAACAAGAAAAACTTTGCATTTTGCAAAATAACCATTTTTGAA
AAAATTATTGGGGGGGCATAGCCCCCCTTGCCCCCCCAGTTGCTACGGCA
CTGACTCGAAATAACAAAATGTCACACGCCTCTCAATTTAATACAAATTA
ATTAACTCGAAGTCTCATTGCCGTTAGAGTCACAGAGACCTTTCCGTAAC
AACTTTATATCAATTTTTCAATTTTTTTTCATTTTCTTTTAGTTCATGTC
AATGGGTTCTTCGCACTTGGCCAAGATCGGAAAGATTTGAAATGGAAATC
ACTTTCTACCCAAGGAAGCAGCAACGACAAAACTGTCAATTGGAATGTTT
ATCTACTAACAGAGCTAATTCCAATCGTCTACAGTGATTTGTTTGATTTC
TTGAAAACACTCGAAATCGAGATTGATGTTTTATACAAAGCATGGCCAGA
TCAAAACGAGATCGATTCAAAATGGCGTCCTATTCTCGACTTATTCCATG
CTTTGATGAGAGAGAAAGATTTTATATACGTTGGTTTCCAAGATACGTGG
TATAAAACACAAAACGTTCGGTTTATCAAGACAGATGAAATGACAGGGGA
TGAACTTTCAGCGGTTGAAGAATTGTTGGTTTCGACGAATATTCCGTTTG
CTATTGCACCACAAGCGATCACTGATCGTCTGCCGTGTCATTGGATCAAT
TCTTATGAAGTAAATCGTTTGATCATTGGATATTCCATCTTTATAAGG Coding sequence (CDS) from alignment at sc0000011_pilon:387154..391301- >XLOC_035227 ID=XLOC_035227|Name=XLOC_035227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3234bp|location=Sequence derived from alignment at sc0000011_pilon:387154..391301- (Clytia hemisphaerica_ch_hm2_pilon)
AAACAGAAGCGAGAGAAGTTTAAACGGCGAACGGTGGTAGATGAGATAAA
AGCAATTCTTCAACAGTATCCTGACGATGGCCAAATCTTTAAAAAACAGA
AGCGAGAGAAGTTTAAACGGCGAACGGTGGTAGATGAGATAAAAGCAATT
CTTCAACAGTATCCTGACGATGGCCAAATCTTTAAAGAGATCATACAGAA
TGCTGAGGACGCAAGAGCGAGCGAAATAGTCTTCGTTTTTGACAAGAACG
TCGACCAAGATGCAGATCTTCATTTCTCAGAAGAAAAGCTGCGCAGATAT
CAGGAGATCATACAGAATGCTGAGGACGCAAGAGCGAGCGAAATAGTCTT
CGTTTTTGACAAGAACGTCGACCAAGATGCAGATCTTCATTTCTCAGAAG
AAAAGCTGCGCAGATATCAGATTCCATCTTTATATGCTTACAACAACGCG
TCCTTTACACCAGCGGATTGGGATGGTGTCATCTCATTAGGAATAAGTGG
AAAGACCAAGCAAGCATTGAAAGTTGGACGCTTTGGGCTTGGGTTTAAAT
CAGTTTTTCATTTGACAGATTCCATCTTTATATGCTTACAACAACGCGTC
CTTTACACCAGCGGATTGGGATGGTGTCATCTCATTAGGAATAAGTGGAA
AGACCAAGCAAGCATTGAAAGTTGGACGCTTTGGGCTTGGGTTTAAATCA
GTTTTTCATTTGACAGACTTGCCATGCGTTGCCAGTGATTCTACATTCGC
TTATCTCGATCCCATGAAAGAGACGTTTAAAGAAGAAGTCGAAGTTTTGG
ATTTTGATGAACCAACCGACTCCGATGCTGATTTCCACGATTTCAAATCC
TTCCAAAGATTGGGTGAAAAATTTTGGAGAAACGAGAATGGAGTTGAAGA
CTTGCCATGCGTTGCCAGTGATTCTACATTCGCTTATCTCGATCCCATGA
AAGAGACGTTTAAAGAAGAAGTCGAAGTTTTGGATTTTGATGAACCAACC
GACTCCGATGCTGATTTCCACGATTTCAAATCCTTCCAAAGATTGGGTGA
AAAATTTTGGAGAAACGAGAATGGAGTTGAAGGTACATTGTTCCGTTTGC
CGCTTCGCTTGAAAGCTTCCAATCTTTCATCAGTGATCTATGACGAAGAG
CGAATCAACGCATTACTTGAGAGATTCAAAGAAGAAGCACACACCACAAT
GATCTTCCTCAAACACGTCAAAAGCATCAAAATCTACACTATTGAAAATG
GTTCGACAGTCATGAAGGAAGTTTACTCAGCTAAATTGACAGAGCATAGC
CAAGAATATCAATCTCTCAAAGTTGATTTTGTGGAGCAAATCAACCGTTT
GGTAGACGAGGAACAAGATTTTGCGACCATCAAACAATTACGTCATTTTC
TTGAAATCGAAGTGGAGAGTTTGGACGAAGATGAAGAAGAAGAAGAACAA
ATTTACGAATACGCTGTTTGTGAAAGATATGGGTACGAAGGAACGAATGA
AGATTTCATCTCTCTGATGTATGATGAAGAATTATCGTATGTACCATTGG
TTGCCATTGCTTACCCTATCAATCAAGACTTGGACGAAGGAGGTCACGTG
TTTTGCACGCTACCGTTACCGCTTCATTGCCGAAAAATGACTGGCATGCC
AGGTACATTGTTCCGTTTGCCGCTTCGCTTGAAAGCTTCCAATCTTTCAT
CAGTGATCTATGACGAAGAGCGAATCAACGCATTACTTGAGAGATTCAAA
GAAGAAGCACACACCACAATGATCTTCCTCAAACACGTCAAAAGCATCAA
AATCTACACTATTGAAAATGGTTCGACAGTCATGAAGGAAGTTTACTCAG
CTAAATTGACAGAGCATAGCCAAGAATATCAATCTCTCAAAGTTGATTTT
GTGGAGCAAATCAACCGTTTGGTAGACGAGGAACAAGATTTTGCGACCAT
CAAACAATTACGTCATTTTCTTGAAATCGAAGTGGAGAGTTTGGACGAAG
ATGAAGAAGAAGAAGAACAAATTTACGAATACGCTGTTTGTGAAAGATAT
GGGTACGAAGGAACGAATGAAGATTTCATCTCTCTGATGTATGATGAAGA
ATTATCGTATGTACCATTGGTTGCCATTGCTTACCCTATCAATCAAGACT
TGGACGAAGGAGGTCACGTGTTTTGCACGCTACCGTTACCGCTTCATTGC
CGAAAAATGACTGGCATGCCAGTTCATGTCAATGGGTTCTTCGCACTTGG
CCAAGATCGGAAAGATTTGAAATGGAAATCACTTTCTACCCAAGGAAGCA
GCAACGACAAAACTGTCAATTGGAATGTTTATCTACTAACAGAGCTAATT
CCAATCGTCTACAGTGATTTGTTTGATTTCTTGAAAACACTCGAAATCGA
GATTGATGTTTTATACAAAGCATGGCCAGATCAAAACGAGATCGATTCAA
AATGGCGTCCTATTCTCGACTTATTCCATGCTTTGATGAGAGAGAAAGAT
TTTATATACGTTGGTTTCCAAGATACGTGGTATAAAACACAAAACGTTCG
GTTTATCAAGACAGATGAAATGACAGGGGATGAACTTTCAGCGGTTGAAG
AATTGTTGGTTTCGACGAATATTCCGTTTGCTATTGCACCACAAGCGATC
ACTGATCGTCTGCCGTGTCATTGGATCAATTCTTATGAAGTAAATCGTTT
GATCATTGGATATTCCATCTTTATAAGGTTCATGTCAATGGGTTCTTCGC
ACTTGGCCAAGATCGGAAAGATTTGAAATGGAAATCACTTTCTACCCAAG
GAAGCAGCAACGACAAAACTGTCAATTGGAATGTTTATCTACTAACAGAG
CTAATTCCAATCGTCTACAGTGATTTGTTTGATTTCTTGAAAACACTCGA
AATCGAGATTGATGTTTTATACAAAGCATGGCCAGATCAAAACGAGATCG
ATTCAAAATGGCGTCCTATTCTCGACTTATTCCATGCTTTGATGAGAGAG
AAAGATTTTATATACGTTGGTTTCCAAGATACGTGGTATAAAACACAAAA
CGTTCGGTTTATCAAGACAGATGAAATGACAGGGGATGAACTTTCAGCGG
TTGAAGAATTGTTGGTTTCGACGAATATTCCGTTTGCTATTGCACCACAA
GCGATCACTGATCGTCTGCCGTGTCATTGGATCAATTCTTATGAAGTAAA
TCGTTTGATCATTGGATATTCCATCTTTATAAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:387154..391301 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1120-1623:505 |
| Aaloc | 550-1116:1687 |
| Aaloc | 367-546:2330 |
| Aaloc | 217-363:2819 |
| Aaloc | 100-216:3503 |
| Aaloc | 7-99:4149 |
|
