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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3319908..3321890+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041344 ID=XLOC_041344|Name=XLOC_041344|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1983bp|location=Sequence derived from alignment at sc0000001_pilon:3319908..3321890+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAAAATCAAGCGATAAAGGACGCTGTCCGACAAGTTATGAATGA
AGAGTTCAAACAAGATCAATCTAAAGCtattgaaaaactgaaaacaagAT
TAGACAAGAAGAGAAGCTATGACCAAATTCATTTCAATAAGAAAGGACAC
GAGGAACAGTTCCAGCACACCACTCAAGTATTAGAGAATGTGGACGACGC
TCTGGAGGCAttggaagaaaaagattttgatgttGCAAAAAACTTCCTGA
CTGAAGGTAAGAAACTTTTAGAAGAAAGGTTGCAACACTTACAAATCGCT
GACAGGGAGGGCTGGCTAGTGCTTAAACATTATAAAAGGAATATTTTGGT
TTCGTCTGGAGACATTCAGGAAAAGCATTTAAAGGACGCTCGTAAAACTG
CTGAGCAGGTAAAGGCCAAAATGGAACAAGAAAACAAGCCTAAAGACAGT
AAATACAGAAGGATGGATGAAATAACTTGTTACAACTGTAAACGTATCGG
TCATTTGTCAACTTTTTGTCCTTttgttcaaaaacaaaaccctcATATTC
CTTCCACTAAAAGTAGCTCTTCATCGTCGTCATCAAAAAGATCATCTACT
TCAACATCAAAAAGTCGAACTGggaaataatttaatttcataaatgaATA
AATGTATTCAAAGCTGGACAGTTTCTTTTTGTAGAACTACGTGTTCGtta
attttctggaaaaaattgcgttatatttgataaagatacagtttgttttt
ctcatttatgtgtttttaaacactttttcatacagcgaatttgttttgca
atttttactttgtcatttAATTCAGAGTTCTGGGAGTTCAAACGATCAGA
GGAATACCCCGTCACTGGGAAAATATCACAATTCTCAAGCTTTTGGAAAA
ACGAATTAAAAGCACCATCTCTATTGTCTAATATAACAGATCATGGATAT
AAATTGCCATTTGTGAGCACTCCTCCTTCTTTTTATGCCAAAAATAACGC
TTCAAGTCTGAACAATGCAGCTTTTGTTGAAGAGTCAATCGAAAAACTAA
TTAAGGACGGTCGCATCAAGCAAGTAAAAGAAGCTCCTTTTTGTGTGAAT
CCTTTGACTGTagcaaaaaagaatgaaaaattacGACTTGTTATTGATTT
GAGGCACATCAACTCTTttataacctgataacagatgttcataattttct
tacgcgcacggtaaacctctaaaggcacttgaaaattatacatctgagga
aaatagtcctcccgcggaaaattctacaacaagaatcttgttgtgcgccg
aaaatataaaaactgatacggcgccctattcataaacacaatcacgcaac
tttgttgtcattcctagtccttttagacgaacgcggtccttacgatttcg
agattgcatattcgtcagattgtttgttttcacacatccctttagagctt
cagcgtggtgtgcagaaaacattcacaatctgatctcaggttactcTTTT
ATCGATCCACCGAAATTTAAATATGAGGATTTGAAGACTGCTGCAGAAGT
TTTTGAGAAAGAGgattttttaataacttttgacTTGACAAGTGGTTATC
ATCACGTACCGATTAATGAGGACTTTCAGAGTTTTCTCGGTTTCGCGTGG
AGCTTCAAAGGtgtaacaaaatattttgttttttgtgtccTGCCTTTTGG
ATTAAATATTGCCTGCtggatttttacaaagctcatgCGTCAGCTAGTAA
AGAGATGGCGCCGTCTTGGGATCAGATGTGTTATGTACTTAGATGACGGT
ATAGcaggtgagaaaaattttgacaaagcTATTTCCAACCGAAGCATTAT
CCTTCGTGATTTATGGGCCGCAGGTCTTactattaattttcaaaaatcca
gtcTCAGGCCAGAACAAAGAAAATCGTGGCTAGGATTTATCATAGACACA
ACAAAAATGACATTTACAGTTCCTGAAGTAAAA Coding sequence (CDS) from alignment at sc0000001_pilon:3319908..3321890+ >XLOC_041344 ID=XLOC_041344|Name=XLOC_041344|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000001_pilon:3319908..3321890+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAAAATCAAGCGATAAAGGACGCTGTCCGACAAGTTATGAATGA
AGAGTTCAAACAAGATCAATCTAAAGCtattgaaaaactgaaaacaagAT
TAGACAAGAAGAGAAGCTATGACCAAATTCATTTCAATAAGAAAGGACAC
GAGGAACAGTTCCAGCACACCACTCAAGTATTAGAGAATGTGGACGACGC
TCTGGAGGCAttggaagaaaaagattttgatgttGCAAAAAACTTCCTGA
CTGAAGATGGCAGAAAATCAAGCGATAAAGGACGCTGTCCGACAAGTTAT
GAATGAAGAGTTCAAACAAGATCAATCTAAAGCtattgaaaaactgaaaa
caagATTAGACAAGAAGAGAAGCTATGACCAAATTCATTTCAATAAGAAA
GGACACGAGGAACAGTTCCAGCACACCACTCAAGTATTAGAGAATGTGGA
CGACGCTCTGGAGGCAttggaagaaaaagattttgatgttGCAAAAAACT
TCCTGACTGAAGAGTTCTGGGAGTTCAAACGATCAGAGGAATACCCCGTC
ACTGGGAAAATATCACAATTCTCAAGCTTTTGGAAAAACGAATTAAAAGC
ACCATCTCTATTGTCTAATATAACAGATCATGGATATAAATTGCCATTTG
TGAGCACTCCTCCTTCTTTTTATGCCAAAAATAACGCTTCAAGTCTGAAC
AATGCAGCTTTTGTTGAAGAGTCAATCGAAAAACTAATTAAGGACGGTCG
CATCAAGCAAGTAAAAGAAGCTCCTTTTTGTGTGAATCCTTTGACTGTag
caaaaaagaatgaaaaattacGACTTGTTATTGATTTGAGGCACATCAAC
TCTTttataacAGTTCTGGGAGTTCAAACGATCAGAGGAATACCCCGTCA
CTGGGAAAATATCACAATTCTCAAGCTTTTGGAAAAACGAATTAAAAGCA
CCATCTCTATTGTCTAATATAACAGATCATGGATATAAATTGCCATTTGT
GAGCACTCCTCCTTCTTTTTATGCCAAAAATAACGCTTCAAGTCTGAACA
ATGCAGCTTTTGTTGAAGAGTCAATCGAAAAACTAATTAAGGACGGTCGC
ATCAAGCAAGTAAAAGAAGCTCCTTTTTGTGTGAATCCTTTGACTGTagc
aaaaaagaatgaaaaattacGACTTGTTATTGATTTGAGGCACATCAACT
CTTttataacTCCACCGAAATTTAAATATGAGGATTTGAAGACTGCTGCA
GAAGTTTTTGAGAAAGAGgattttttaataacttttgacTTGACAAGTGG
TTATCATCACGTACCGATTAATGAGGACTTTCAGAGTTTTCTCGGTTTCG
CGTGGAGCTTCAAAGGtgtaacaaaatattttgttttttgtgtccTGCCT
TTTGGATTAAATATTGCCTGCtggatttttacaaagctcatgCGTCAGCT
AGTAAAGAGATGGCGCCGTCTTGGGATCAGATGTGTTATGTACTTAGATG
ACGGTATAGcaggtgagaaaaattttgacaaagcTATTTCCAACCGAAGC
ATTATCCTTCGTGATTTATGGGCCGCAGGTCTTactattaattttcaaaa
atccagtcTCAGGCCAGAACAAAGAAAATCGTGGCTAGGATTTATCATAG
ACACAACAAAAATGACATTTACAGTTCCTGAAGTAAAATCCACCGAAATT
TAAATATGAGGATTTGAAGACTGCTGCAGAAGTTTTTGAGAAAGAGgatt
ttttaataacttttgacTTGACAAGTGGTTATCATCACGTACCGATTAAT
GAGGACTTTCAGAGTTTTCTCGGTTTCGCGTGGAGCTTCAAAGGtgtaac
aaaatattttgttttttgtgtccTGCCTTTTGGATTAAATATTGCCTGCt
ggatttttacaaagctcatgCGTCAGCTAGTAAAGAGATGGCGCCGTCTT
GGGATCAGATGTGTTATGTACTTAGATGACGGTATAGcaggtgagaaaaa
ttttgacaaagcTATTTCCAACCGAAGCATTATCCTTCGTGATTTATGGG
CCGCAGGTCTTactattaattttcaaaaatccagtcTCAGGCCAGAACAA
AGAAAATCGTGGCTAGGATTTATCATAGACACAACAAAAATGACATTTAC
AGTTCCTGAAGTAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3319908..3321890 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-1080:1507 |
| Aaloc | 256-600:828 |
| Aaloc | 73-252:76 |
| Aaloc | 1-72:1 |
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