|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1307786..1313586- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012423 ID=XLOC_012423|Name=XLOC_012423|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5801bp|location=Sequence derived from alignment at sc0000049_pilon:1307786..1313586- (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCTTACCACATTTCTCGAATCATTCATCTCAAGTCAATAACAGATTT
AGGAAAGATGACTTTCTTACGAAGAATATCTCTTTTGCTTCTGCTGTTCG
GTGGTTTTCTTCTTAATGCCGATGCTGATGTAGACGTGGATAGAATACGG
AACACGTTATCGAGAGTTTTACAAGATCCAAGTATTCCCCCTAATATTGC
AAGGTAAAAGAAATTATTTTTGATTCTCCACTAATAGAGCTTCTATTATA
CCCCTTACATCCCTGTCTCAAAAATTCGGCGTGATTTTTACACTCAATTG
AAATGAAATTTTAAAATCAAAATCTCAATCTGAAATATAATAAAATGTAT
TTACTTCAACTCAAAAAGTGGGAGCGATTCCCATTCAACGGGAATGGTTG
TCACTGGGCGAAATAAGAGATTTCCAATCCTGGGAATATCTTGAAACTTT
GGAAATATAGAAAAGTCATTTTTTCATATTTACAACTGTATATGGAAATA
TAATATTTCATGGTATTTCCAGGATTGAAACATCATATTTTCAAAATATT
TCCAAATTTTGGAAATATGATTTTTCAATATGAATTTCAGATTTTGAAAT
CTCTTATTTCGCCCAGTGGTGTTATAGTAATTTCCAATTGGTATCTTTCC
CACTGGGAAGTTTGAACTTTGATTTTCATCAATTTACTGTAATTGTAGCT
TTCGAAAATCGATTTGAATTACTTCCTCGATATAATTCAAGGAGTATAAA
TAGAGGCAAGACTTCACAGAGTTCATTTTTTATTGGGAATAATTTCTGGT
ACCCTTTAGTCCTAGATAGGAAGAAAGTACAATGAGAAAAAGCTAAATAA
ATATGAGCTTGCTTCCTAAGCAAGCTTATTGTAGAGGGTTTTTATCTTCT
CCTCGTAGAGTGCTTCCTATAATAAAGAGTTGACACACTATCTATGTTTC
AAACTCAGAGTTCCATGGTGCTCAGGCACCAATCATCAGTGATTTTCAGC
TGCTCCGAGTTTGAAACATAGATATTGTGTCAACTCTTTATTATAGGAAG
CACTCTACGAGGAGAAGATAAAAACCCTCTACAATAAGCTTGCTTCCTAT
TTTTGTTTCAACGACAATATAGGTACATTGCAATGTTGCATGATGGTATT
GATTTTTTGAAATGCTTGCCAATCTACAAAAAAAGTAGCAGATGTTATAT
CTCCAAAGTTTGCAAAACACCAAAGCTGAATGTCAAGGGAGTGCTGGTTC
CATTCCAAACTGAGGTTTGAATTTTGTTATTCAAAATTGTTCCCTGTCTT
TAAATAAAAGCGACGCTTGCTTAAACTTGTAGGTAATGACAAAAAATAAC
ACAAAGGATTTATTATACACTGGATATACAAGTAACAGACTTTTGCCGAT
TTCTCGTGTACTAGCTATGTCCGCAGTAAAGATATTATTGTTCACTCTCC
TTCCCTCATTAAATGATTTTTCGAAGCATTTTTATTGCATTTCTTATCGA
AAATCACTCATCCAATTCCCAAAAATGACTTGAAACTTTCCTGTGAGAGT
CAGATTCTTCCACTTAATTGCTAATTACACCCCTGTGTCACAGACCCGGT
GGACCCCCCCCCCCCCACCCCGGTGAAAAACGAAAAATAGGCCAAAAAAT
TGTCCCCGGTAAAAAAATACCCTACATTTTCAACCCCACTGGGAAATTGC
CCTATGATTCTATCCCCATTGAAAATTGAATAGAAAAAATTGGACTCCAA
AACCATCCCCACTGGAATTTTTGAGCTGGAAACAAAAGATTTTCTATTCC
CATTGGGATTTCGATAGAAATTTTCATCCCAAAATTTTCAAACTTCAACC
TCAAAAAAACCACCTTGCCATCCACCACGTGCCTCCAAAGGATTTTCATA
CCACAGTGGAGCCAAGACACTCAAATCTTATGTATGTTAATCTCAGCTCT
TCTAGGGACAGTCTTGGAAAGATATTCCCAATTGAAAATTTCGTGTCACT
ATAAGCATTTTGTCTGAATTTCTTGTCCAATGATGTTTTTCTCACATTAG
ATTTCACAAATGTATCCAGCTTGGAATGCTAGCCTTACTTGCTAGCCTTA
CAAACTTTTTTTCTGCAAATGTACAAAAAGAAAGAGCAAGAGAACTTCTT
TAAAATAAGACTGATGATAAAGATTTTTAAAAATCAGACATCTTCGAGCC
GCCATGACAGTTGTCCTTTGCGGGCAAAGCTAGAACATCAATTGTTTTCT
GAAACAATGGAAATACAATGATCGCTCTCCATCGTTTTATGAGTCATTTA
TCCAGTGTATAATAAATCTTTGATGACACGCAAAAAGCTAACAGTTAGGT
TTATAATCAGTCTCATACTTTGAGCCACTTGCACCAATTTTTCATTATAC
TGGATGTGACACGATGTTTTGTAAGCACTATTTTGATCATAAAAAGCTAA
GCGACAGGAAATGAGTTTGATTTTTAATCTAAGCTTTCGATGTATCTCAG
ACGTCGTCTATTTATATAGCGGATATTTGTATGGAGCTGCTTTACCCATA
GTCATGGGGTAAAGTCAAGACTCAGACTTTTACGAGAAAGAAACACCATA
CACGATTTTCTATAAGGACATCCAATGTTCATAACTTTTTGACTTTTAAG
CCATAAAATGTACTTAATATGTTCTCATTTTCACCATTTTCTGTGTTTTT
GTCCATGTTCCTAAGAATTTGGATGTGAATCCTCAAAGTCTTAAAATGCT
CTTAACTTTGTACTTAACAAACCGAAAAAATGGAACCCTTCTCCTCTCGC
CTTAGATCTGTAAAAGACCATACAAGATTGTGATTCATCTCCAGTCCTTT
AAAACACCTTGGTATGCCACGCCCAAACTTCGACCAATCACAATTAATTT
CAGAGACGACCATAGAAACGGGATGTTTAAAATTCACAGCGATACCACTA
TAAAAGCGCACGTACGATATCTAAGGTTCTTTAATACAGGTATGTTTCGT
TTGGAAATGTCTTTAACATAGCTCACATAAACATGCTTAATTTATTCTTG
TAGTGTTCCAACTATCGTTGACCAGGAAAGATCTTCTCAAAGCCAAGGGT
GCCAAATAAGACGAAAAATGCGAACAGTGACAAGATTATAATACTAGCCT
AAGAAATGAAGATTAAATGGGATCACTTCATAACTAATCCACTAATCTAG
GCTTCAGAAAGAAATGTTCAAAGGCAATCTGCACTATCAAATATATCTCT
TATCTGATATTCCGATGGCGGATTGGCGGCCGCTCACGCTAAAGCTCTAA
AGGGAGCGGGCCAATTTCCCATCGGAGAGGAATGATAGTCGGCCTTTGGC
GTGCCGCATCCTCAGTCGGGTTCAACAGTCCTTGCCCATAAACCTAGAAT
ATTTCGGTTGGACCCGCCAATCCCTGAGGGCTGGGTTACCAGACCTCCCG
CAGCAAAATTCTTGACGCAGTCTCGCAAAATTCCGTAATGTAAACCTTCC
AGATGTTGAAAATTTTACCGACCTTCAGAGCTTTAGCGTGTCGGATGAAA
ATTTCACCATCTGGGTGCCAGATAAATATATCTCGAACCTAGAGCAGCCT
TTGTGAGCATTACAGCAGAGTCATATAAGAAAAGGATCTTGGTGCGAATT
TACCATTCGCCTGGACGACTTCATACTTGACTTTCTTCGCCATAGGGAAG
GTGAGGTTCTTGATCAATGGGAAAATAAGATATGACTGCACGAAACCACG
TGGTCCTTACAACTGGTTTCAAAGAGGTGAGAAAAACTTTTTTGCTCAGT
TTTTTTTATCATGGTTCTGAATACATCTTTTGTGATTGGGTCATTTCTTA
TAATTTCAGCCTGGGAATACAAGTTAATTTGCGCTACACTCTAGACGTAA
ACGGAATCCTGATATTTTTTGTTGATAAAGACTTTTTTGAGGTCGAGTTC
CCTGCAAAATTTTAAAAGCCAAATCATAAATTAGGTGCTTTAATTTACTT
GAGGAATATTAAATATTAGCCCTAATCACGCACTCAGGATCTAAAAGCTC
CGCTCAAAAATATTCTATTATGGAAATATGGCTGGAAACAGGGTATTAAC
CTTTCAAAGCCGCTAACTTTTTTGAAAAAGGCCAAAAAGTTTATCATTTT
TTTCTGGAGATTTATTCTTTCAAAGGCAATTTCTCGACCAGGACAAACGA
TTCAGGTACCAACTTTGGTATCGTTGGAAAGCTCTTCTCAGGCAAATTAA
GGCCTATCCAGATTTTTCAAACTTACCTCAATTTTTTATCACCGTTTCCA
CTTATCATAGCATATCACTTCATATATCGAAAGAAGCGTATTGGAGTGTA
GATCACTGGAATTGCTGTGCCATAATTAATTTTTTCACCCAAAAAAAGAT
ATTAGGCAAAAACCAAAAAATGCTGACGTCAGCAAAACTTGTTTTTTGAA
TAACTCCAATTTGGCTTATGGTAAAAACATGAAATTTGGACCAAAGTTGC
ACACCATTAAAAGGATCATTTTAAGAAACAAAATTTTTGAATTTTTGCTG
ACGTCAGCAGTTAATTGCAAAATTTCGTATTTTGCTGATTTCTGCTGACG
TCAGCAAAATTTGCAAAAAAAAATTATACAAAAATGTTCCTATTATTGAT
ATGCAACTTTTGTCCAAATTTCATGAATATACCATAAGCCAAACTGTCTA
ATATCTTTTTTTGGGCGAAAAAATTAATTATGGCACAGCAATTCTAGTGA
TCTACACTCCAATAGGCTTCTTTCGATGCATGAAGTGATATCCTATGACA
AGTGGAAACGGTGATAAAAAATTATGGTAAACTTGGACGTGCCATAATTT
GCCTGAGTTTCTCTCAGCTACAAAAAATAGCAGATTTTTTTTCTCTCAAT
CTCAAGTGGTCAGGAGTTATGACCAAAAGACTGTGTATCGGTAAAATAAC
CTTTTCAAAACGTATATATACGTATTTCGCCTACTAAGGGTATTAAGGCG
GGGTCAAAATGCTTGCAACGTTACAAATCATTTCTAGGAGCTCATTTTCA
TTTCAAATGAAGGGTATCAACAAGTAGAATAAGATTCAGATGTTTTCTGA
TTAAGAAATTTGGCATAATTCGCAAAAAACTTAGATTTTGCGTAGATAGA
TTTTTGCTATTTTGATGACGTCATAAACATTTAAGTCCTAATAACTTTTG
ATTTAAGTATCGAAATTAATTGAAATTCGTCCAAAGATGCACATAATTAA
TGTTTCCAGAATAAAAAAATTTGCTTATGAAATTTGATGACGTCATCACT
TTTCGACTGAAAAAATAAAAATGAAATACTTTAAAATACTGACGTCATCA
TAATTTTAAAAATATTTTGAAATCTTGCTTTTCCCGCCCGAACTTTAAAA
TTTTATTTTAAAAACGACGAAATACCTAGACTATGCTATAGTCTAAGACG
AATTCGAATCTCGGGTGACACTGATTGTAATTTAACGTTTACTCAACCCT
CGATCAATTTCTTCTGTATTCTTCAGGTCAATTGAGTGAACAGGCCCCTC
GTGGTCAATATAACCGAATTTGGTACAAACTTCTTGTTCGATTTGAACTC
AAAACTAAAGCACACAAACACTGGTGGAAATTCTCTTACAAATGTGCCAA
AAACGGGTGTAAAGATTTGGTGAAGAAGAGCGGCACTTTGGGTGGCCATG
CGGTTGCGGGTCCACAGTCATGTAAGAATGATGTTCTGAAATACCGGAAT
TACTTGTTGGAAAATCAGAGAAGGCGTTGTCCGGGATGTGTGGAGCCATG
A Coding sequence (CDS) from alignment at sc0000049_pilon:1307786..1313586- >XLOC_012423 ID=XLOC_012423|Name=XLOC_012423|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000049_pilon:1307786..1313586- (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCTTACCACATTTCTCGAATCATTCATCTCAAGTCAATAACAGATTT
AGGAAAGATGACTTTCTTACGAAGAATATCTCTTTTGCTTCTGCTGTTCG
GTGGTTTTCTTCTTAATGCCGATGCTGATGTAGACGTGGATAGAATACGG
AACACGTTATCGAGAGTTTTACAAGATCCAAGTATTCCCCCTAATATTGC
AAGAGCTCTTACCACATTTCTCGAATCATTCATCTCAAGTCAATAACAGA
TTTAGGAAAGATGACTTTCTTACGAAGAATATCTCTTTTGCTTCTGCTGT
TCGGTGGTTTTCTTCTTAATGCCGATGCTGATGTAGACGTGGATAGAATA
CGGAACACGTTATCGAGAGTTTTACAAGATCCAAGTATTCCCCCTAATAT
TGCAAGGTACATTGCAATGTTGCATGATGGTATTGATTTTTTGAAATGCT
TGCCAATCTACAAAAAAAGTAGCAGATGTTATATCTCCAAAGTTTGCAAA
ACACCAAAGCTGAATGTCAAGGGAGTGCTGGTTCCATTCCAAACTGAGGT
ACATTGCAATGTTGCATGATGGTATTGATTTTTTGAAATGCTTGCCAATC
TACAAAAAAAGTAGCAGATGTTATATCTCCAAAGTTTGCAAAACACCAAA
GCTGAATGTCAAGGGAGTGCTGGTTCCATTCCAAACTGAGATCTGTAAAA
GACCATACAAGATTGTGATTCATCTCCAGTCCTTTAAAACACCTTGGTAT
GCCACGCCCAAACTTCGACCAATCACAATTAATTTCAGAGACGACCATAG
AAACGGGATGTTTAAAATTCACAGCGATACCACTATAAAAGCGCACGTAC
GATATCTAAGGTTCTTTAATACAGATCTGTAAAAGACCATACAAGATTGT
GATTCATCTCCAGTCCTTTAAAACACCTTGGTATGCCACGCCCAAACTTC
GACCAATCACAATTAATTTCAGAGACGACCATAGAAACGGGATGTTTAAA
ATTCACAGCGATACCACTATAAAAGCGCACGTACGATATCTAAGGTTCTT
TAATACAGGGAAGGTGAGGTTCTTGATCAATGGGAAAATAAGATATGACT
GCACGAAACCACGTGGTCCTTACAACTGGTTTCAAAGAGGGAAGGTGAGG
TTCTTGATCAATGGGAAAATAAGATATGACTGCACGAAACCACGTGGTCC
TTACAACTGGTTTCAAAGAGGTCAATTGAGTGAACAGGCCCCTCGTGGTC
AATATAACCGAATTTGGTACAAACTTCTTGTTCGATTTGAACTCAAAACT
AAAGCACACAAACACTGGTGGAAATTCTCTTACAAATGTGCCAAAAACGG
GTGTAAAGATTTGGTGAAGAAGAGCGGCACTTTGGGTGGCCATGCGGTTG
CGGGTCCACAGTCATGTAAGAATGATGTTCTGAAATACCGGAATTACTTG
TTGGAAAATCAGAGAAGGCGTTGTCCGGGATGTGTGGAGCCATGAGTCAA
TTGAGTGAACAGGCCCCTCGTGGTCAATATAACCGAATTTGGTACAAACT
TCTTGTTCGATTTGAACTCAAAACTAAAGCACACAAACACTGGTGGAAAT
TCTCTTACAAATGTGCCAAAAACGGGTGTAAAGATTTGGTGAAGAAGAGC
GGCACTTTGGGTGGCCATGCGGTTGCGGGTCCACAGTCATGTAAGAATGA
TGTTCTGAAATACCGGAATTACTTGTTGGAAAATCAGAGAAGGCGTTGTC
CGGGATGTGTGGAGCCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1307786..1313586 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 613-885:274 |
| Aaloc | 532-609:2105 |
| Aaloc | 346-528:2997 |
| Aaloc | 205-345:4679 |
| Aaloc | 1-201:5802 |
|
