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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:122407..127323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013350 ID=XLOC_013350|Name=XLOC_013350|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4917bp|location=Sequence derived from alignment at sc0000250_pilon:122407..127323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATATGCTATTCCACCATCTTCTTATTTTATTGGCTTGCATTGTTTC
CAGTTTTGCATCGCGTTCAACAACTTGTCCAACTAAATGTGAGTGTTCTT
GGGAAATAGATTATAGTGCCGTCGATGTGTATTGTATGAGCCAAAATATC
ACCAACAAAGATCTTCTGGATATTGCATCACAATCGGATACAAAAAAAAC
TGTGCATTTATTTCTCAACAGAAACCTAATCACCGAATTTCAAGCTGAAC
TTTTTGTTAATTTCACTAAACTTGATCGAATCACGTTGAACGAAAACCAA
CTGACCAGATTGCCTGCAAACATATCACTTTATATACCAAGCATCACTAT
CCTCGATCTAGAAGACAATAATATTAATAAAATTAAACAAAAAGACTTCG
AAGGGTATGATTCTATCATATCTATATTCCTTCAAAGAAATGGTATTGAA
AATTTGGAACCTCGTGTTTTTCAGGATCTTTCACAACTTGAACATCTGTA
CGCAGAAGGTAATAAATTGACGACTTTACGAAAGGGTACGTTTACCGGAT
TAGCTAAGTTACGACAATTATTCTTAGCTCGTAATGATATAACGACTGTT
GAAACTGGAGTCTTTGGTGATCTTCCGTCTCTGAGTTGGATATACTTGCA
GTTCAATAAGATAACAACAGCACGAAGAGATTGGTTTGGTTCAGTTGTTC
CCGATTTATTGGGACTCGAGAACAACCCATTGATTTGCGATTGTGTTATG
TATGATACAATTAATTATTTCAGTGAAATTTACCATCCTGGAAGAGTTGG
GGGTAAATGCAATGGTATTGAATTGGCAGATTTCTACCGCAAGAACAAAT
TAAATTGTAGTTCCTGCTCTGTCAATGAATGCCAAAACGATGCAACATGT
CAAGTTATTGACCAATTCAATTACAATTGTTCCTGCAGTCGAAATAACCA
TGGAGAATTTTGTCAATTCAAAAACGCCTGTTCATTTGACCTGAGATTGA
AACCATGTCGAGAGATAACCAATAGTATATGTGTGCCAATCCAAAATACA
TTCAAATGCGATTGTCGTGTAGGATATTCTGGTGAGCGCTGTCAAATGAA
AGATATTTGCTATTTTGATAACCCCTGTCAGAATGATGGAATTTGTCAGA
AAAGTAATATTTCAATGGGATATACATGCCAATGCAACGAAGGTTATCAT
GGTCAACAATGTCAATTATCAACTCCAGATACTGGTTTCATCATCTTAAT
GGTGGTGTTGGCGATATTAGTTTTGATTGGATTGGTTGGGTTGGCTATCT
TTTTCAGACGTCGAAGAAGACGCAAAGATAATGGCGAGGAGGTGAACATG
TCTCAAAACAAAAGATCAGAGGAATTGGAAAGCTTAACGGTATAATACAT
AACGAAAGCCGAGGTTCTTTTAGAACGCACTTGAAATCTTTTAAAGTCTT
TTGACTGGCTGTAATTTTTTTTTGTTAAACTTGTTTTTTTTTTGTAGTTT
TAACAATACTTTTTCTCAACATCTATATATTAATAACCGTACTGTATACA
TCATTTTGTCTGTGTGTCACTTTCGTTTTCGCAAGCAATGTTTTTGTTCT
CGATAAGTTTGTTTTGATTTATAGATTGGATAGAGCCTGGTTTAGACTTC
ATTCAGCCTTTGTTTTGAAATTTAAGGCCCATCTACATTTAGCAATTTCA
ATTTGTGCATAGGCTTTCCCACCCCTTTGTTTTTCTCTTTTCTTTTGTTT
GAAATGTTTTTGAATTATTTAACGATTGTATTTATTAATGACATTCGAAT
TCTTTTCAAAACAAAACAAATTCCTTTTATAGAAATTAACATTTCAAATG
TAAATCAAAACATAAAAATCAAAATGTTTGTTGAACAACAACAGACCCCG
AGAACCCAGAGACGATCCATGTCATCCAACGCAAGGGATCAGATTTTACC
TGCTCGTACGAAGAAGAGCTGGACGCAATGCAAACAACCGCAAATTGGAT
CTCCTTAAACTGCGACCCAGAAATCAGCATCATGGTCTGCACGGACAGTC
AGTCACTATGCCTAGCCTTATTAAGCTACAACGTCGAAACAGCAACAATA
AGGGAAGCGCTACACAACAGGCCAGGAAGAACGATCATCCAATGGATCCC
GGGCCACTCAGACGTCCCAGGAAACGAACTCGCTGACCAAGCAGCCAAAG
AAGCGACCAAATTAGAGGCAGACCCAGACCAATATCGTACAGAAGTGCCT
GCACAATGATAAGAAGCAGAATCAAACACCCGACGAACCACCAACAATTA
AAGAAGGTCTACAGTCATTTCTCGAAACAACGTGAACAAGAGGTTAAAAC
CAGAGCGGATCAAGTTCTACTGGCACAACTGAGAAGCGGAAAACACAAGG
TCTTCCGCAGCTACCAACATATGATAGATGAGAGCATTGAACCTACATGC
ACCAAATGTGACAGCGGAGAAATACACAACCTCGAACACTGGTTCCTCCG
CTGCCCAGATGCATCAGAAGCAAAACATGAAATTTTTGATGAAAAAGAAC
TTGAGGTGGGCCTGGGACTTCTCACAAAGTGCCCTGAGAAGTCGATTGCC
CTGGCGAAGAAGACTCTCTTCGGGGTTCAGCAATGACCCAGTATTCACAC
ACACACACAAACACACACACACACAACAGCATTCAAAGGGCGATAAAAAG
CAAAAGGAAAATTAGCCCACCTCTTTCTTCATATAAAAACACTCAAGTCG
TCGTTACAAAAGTGTGAACGTTATTTTTTTACATGTTTAAATATGAAAAG
TTATAACACATGGGGATTGAACCGTGAACTTATTGCATGTCAACCAAACG
CTCTGTTAACTGAGCTAATTTGACAACGAATTCATGGTTGAGATATCAAA
GTTTTCAAAGCTATTCAAAGTCTTTCAAAGTCACCCTCGAATGTCTGCCT
ACGATGGCTAGCCACGATGGCTAGACTGTTCCGATCATAAGAATAGTTTT
ACAAGATACACGCTTTTTTTATAAGAATGGTGTAAAATCCATTTCCTCAT
GGATATTCTTATAAACTTTTTTGGGAAAATCATCCTAAGATATTCTTATA
GCATTCTTAGGTTAGGATCCTAATTCAGACTAGATTTAACATTTAGTAAA
AACGTCTCAAGCATAAAATGGCATTTTTGTGAAAGGAGTGAGCTTTACTT
GGGGGTAATTAACAATTTATAATTGAAAAAGCTTTAAAAATGACATTCTT
AGCTTGAGTAAAAATTCCATAATGGTGATATTCTTAGCATTATTCTTAAT
TTTTTTAGCCATTTTCATCATGGACATTCTTATAAAGTGTATTCTTTTTA
AAAAAGCGTGTATCTTGGTTGTTGGTAAATTTAAGTAATCCATGATCTTC
TTTCTTTGCCAAAAGATAAAAGTAAAAAATACATTTAATTTCTCAAAAGT
AAAAGCAAGCGAAGCGAGCTTATATTTCTTGGTAAAAATATATTCTGATA
TTCTGATAGCGGATTGGCGGCCACCCACGCTAAAGCTTTTAAAGGAGCGG
GTTAATTTTCCATCGGAGAGGAATGATAGTTTTTCTTGTTTTTTTTTTTA
TCTATAGTATAGGTAACACGAACAAATAGTAAAAAACTAAAGGTTCCTAA
CCTCCCGCAAAAGGACCACCAGATCATACCGCCAGGAGGAAGGAACCCAA
AATAAGCTAACAATAAATAAATTAATTAATTAATTAATAAATGGAAAAAA
AAGGAGGCCTTTGATGTACCGCAACCCCAACCGGTACCATCCTTGACACG
GTCTTGCAAAATTCCGTAATCTCATCCTTCCAGATGTTGAAAATTTTCCC
GACCTTCAGAGCTTTAGCGTGTCGGATGAAAATTTCTGCATCTGCTGGTT
TCCAGATAAGGTAAAGAGTCGTCTTAGACGACGCCAGGACGGCTAGTATT
CACTAAATATATCTGTCCTAAACCAAGAAGTTATCGCATTATTTTGGTGA
AAGCAGCCATTTGAGCCCAGTTTTGATTAGAAGTTGTAAACAAGTATGCT
TTTTTCTTTGTTTATATTATTGTAATTTTATGTAAATTTGGCTAAACAAG
GCAGGGTTTCTTTGAATATAGGGAAGCAAAAACACTGATTTGATGCAGAG
CAAATAAAACTATAAAAAGACAGTCATTCCACTGTTTTCAGTGGGTCCAC
ACCCAGCCAACTCGGGTATATAGAACTGAATGGAAGAAGAGAAAGAAGCC
AATCGAATCGTAACCCATCATTCCCATAAGATAAGAAGAATACGCTATGG
TTGGCTAGAACGGCCATTCGAACCGAATACCCTGGTTTATTGTACTGGTG
CCTCGAAGACCATACTATGATCGGATGGATAGGCCTTTCAATGAATAAAT
ATTTGGGAAGACTAAACTACATGTTTTTTTTTATATAAGCAAGTGTCTAC
CCCTTGGTCAGGCTCGTGTATGCTTAAGTTCTCAAAACATCCAGGCATGC
TTATGCTTATTATATACTTATGAAATCATGCTTATGATTTACCTCGAGCC
AAGTTTTTAGTGAAATTTCAGAAATGTAATGGAATGTAGCTAGCCGTGGA
ATGCCTTTTTTTTACTTGACCTCTACCAAACTTTTTTAAACAGATTAATA
AAAGACAACTTGGAAAATATTTCAGGCTGACATAATATGCTTATGTTATG
CTTAGGAATTCTACAAATCTGAGCCTTCATATGCTTATAAGAGTGCTTAT
AGAAAAACATGTATTGAAGTTAACTTAAAAGCTCTATCGATTGGAAAGCT
CATTAAAAGAGTTATTGTTTACATACCTTGTCAAGCTCAAACGCTTGGTC
TTTACAATCTTTGCATCTTACTCGAAGCTTTCCTGGTTTCAATCCATTAC
AATCACCTTTACAGTAG Coding sequence (CDS) from alignment at sc0000250_pilon:122407..127323- >XLOC_013350 ID=XLOC_013350|Name=XLOC_013350|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2358bp|location=Sequence derived from alignment at sc0000250_pilon:122407..127323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATATGCTATTCCACCATCTTCTTATTTTATTGGCTTGCATTGTTTC
CAGTTTTGCATCGCGTTCAACAACTTGTCCAACTAAATGTGAGTGTTCTT
GGGAAATAGATTATAGTGCCGTCGATGTGTATTGTATGAGCCAAAATATC
ACCAACAAAGATCTTCTGGATATTGCATCACAATCGGATACAAAAAAAAC
TGTGCATTTATTTCTCAACAGAAACCTAATCACCGAATTTCAAGCTGAAC
TTTTTGTTAATTTCACTAAACTTGATCGAATCACGTTGAACGAAAACCAA
CTGACCAGATTGCCTGCAAACATATCACTTTATATACCAAGCATCACTAT
CCTCGATCTAGAAGACAATAATATTAATAAAATTAAACAAAAAGACTTCG
AAGGGTATGATTCTATCATATCTATATTCCTTCAAAGAAATGGTATTGAA
AATTTGGAACCTCGTGTTTTTCAGGATCTTTCACAACTTGAACATCTGTA
CGCAGAAGGTAATAAATTGACGACTTTACGAAAGGGTACGTTTACCGGAT
TAGCTAAGTTACGACAATTATTCTTAGCTCGTAATGATATAACGACTGTT
GAAACTGGAGTCTTTGGTGATCTTCCGTCTCTGAGTTGGATATACTTGCA
GTTCAATAAGATAACAACAGCACGAAGAGATTGGTTTGGTTCAGTTGTTC
CCGATTTATTGGGACTCGAGAACAACCCATTGATTTGCGATTGTGTTATG
TATGATACAATTAATTATTTCAGTGAAATTTACCATCCTGGAAGAGTTGG
GGGTAAATGCAATGGTATTGAATTGGCAGATTTCTACCGCAAGAACAAAT
TAAATTGTAGTTCCTGCTCTGTCAATGAATGCCAAAACGATGCAACATGT
CAAGTTATTGACCAATTCAATTACAATTGTTCCTGCAGTCGAAATAACCA
TGGAGAATTTTGTCAATTCAAAAACGCCTGTTCATTTGACCTGAGATTGA
AACCATGTCGAGAGATAACCAATAGTATATGTGTGCCAATCCAAAATACA
TTCAAATGCGATTGTCGTGTAGGATATTCTGGTGAGCGATGAATATGCTA
TTCCACCATCTTCTTATTTTATTGGCTTGCATTGTTTCCAGTTTTGCATC
GCGTTCAACAACTTGTCCAACTAAATGTGAGTGTTCTTGGGAAATAGATT
ATAGTGCCGTCGATGTGTATTGTATGAGCCAAAATATCACCAACAAAGAT
CTTCTGGATATTGCATCACAATCGGATACAAAAAAAACTGTGCATTTATT
TCTCAACAGAAACCTAATCACCGAATTTCAAGCTGAACTTTTTGTTAATT
TCACTAAACTTGATCGAATCACGTTGAACGAAAACCAACTGACCAGATTG
CCTGCAAACATATCACTTTATATACCAAGCATCACTATCCTCGATCTAGA
AGACAATAATATTAATAAAATTAAACAAAAAGACTTCGAAGGGTATGATT
CTATCATATCTATATTCCTTCAAAGAAATGGTATTGAAAATTTGGAACCT
CGTGTTTTTCAGGATCTTTCACAACTTGAACATCTGTACGCAGAAGGTAA
TAAATTGACGACTTTACGAAAGGGTACGTTTACCGGATTAGCTAAGTTAC
GACAATTATTCTTAGCTCGTAATGATATAACGACTGTTGAAACTGGAGTC
TTTGGTGATCTTCCGTCTCTGAGTTGGATATACTTGCAGTTCAATAAGAT
AACAACAGCACGAAGAGATTGGTTTGGTTCAGTTGTTCCCGATTTATTGG
GACTCGAGAACAACCCATTGATTTGCGATTGTGTTATGTATGATACAATT
AATTATTTCAGTGAAATTTACCATCCTGGAAGAGTTGGGGGTAAATGCAA
TGGTATTGAATTGGCAGATTTCTACCGCAAGAACAAATTAAATTGTAGTT
CCTGCTCTGTCAATGAATGCCAAAACGATGCAACATGTCAAGTTATTGAC
CAATTCAATTACAATTGTTCCTGCAGTCGAAATAACCATGGAGAATTTTG
TCAATTCAAAAACGCCTGTTCATTTGACCTGAGATTGAAACCATGTCGAG
AGATAACCAATAGTATATGTGTGCCAATCCAAAATACATTCAAATGCGAT
TGTCGTGTAGGATATTCTGGTGAGCGCTTGTCAAGCTCAAACGCTTGGTC
TTTACAATCTTTGCATCTTACTCGAAGCTTTCCTGGTTTCAATCCATTAC
AATCACCTTTACAGTAGCTTGTCAAGCTCAAACGCTTGGTCTTTACAATC
TTTGCATCTTACTCGAAGCTTTCCTGGTTTCAATCCATTACAATCACCTT
TACAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:122407..127323 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1087-1176:91 |
| Aaloc | 769-1083:4147 |
| Aaloc | 1-768:4918 |
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