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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:45380..50756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017476 ID=XLOC_017476|Name=XLOC_017476|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5377bp|location=Sequence derived from alignment at sc0000392_pilon:45380..50756- (Clytia hemisphaerica_ch_hm2_pilon)
ACAACTGATGAAATCAACGCTGACGCGCAACGTTCTGGTGCTTCTGCTAA
GAAATTGAACATTTCTACTCAATCTGCTATTGATAATCCAACTGAAACTT
GTTTAGAAAACTGTAATTTCATTGTTGAGAGTGATTTGTTTATGTCACTT
ATATTGTCGATTGGCTCATGTATTGATTGCCAGTCAGGCACATCCTTGCA
ATTGCACGGGGTTATTCGCGAATGCGATCGGTTGCAAATGCAACGGGTAG
AAAACGAAAGTGACGTAATACCCTTCGCAAATGCATCGGGTAAATAAAAC
CAGTTGTAGTTGCAAGGGGTGAAGATATTGAAGAATTCGAAAAAAGAAGA
TTTCAGGGGATTAATCTTATTCTTAAATAATTTTTTGTATTGCTCGGGTT
AAGAAACAAGGAGATGAGGGATACCAGAAGGAAAAATGCTTTAAATATCT
ATTCTTGGAATAAAAAAAACCCTTTTCCTGTCAAGGCCTTTGTAATGAGT
AGATCAAACCGCGCGGCGAAAATACTACAAAACGAAAGCCGGACTTAAGG
GAAGAAAATTTTTTTTGCGAGATTGGAAAAAAAAATTATGTTATCTTGAA
AATCTACATCGCGTATTGGAATTTACAATTTTCCTGTTACTGCTATGTCA
TTTTCGAATTTTTCATTTTTAATTACTGTAATTAATTTCTCTGAAAGTCC
ATTTGGGAATACTGGACACTCTCTGGCTTTCAACTTTAACATCTTTAATT
GTTTATATTTGATTTTCTCATTGATTGATAGCGTATTATGGAAAAGTTCT
TACTAAAAGAAAGATATTAATTAATCGTTTTTCTGATTTCATTTTTAGGC
CCTGCCTTCTTTGGAATCAAGTTATGGAACAAAAGAAGACAGAAGACTTT
TTTATAAGAACAAACAAACACTACAAGCACTTACTTTGTATTGTTTTACC
ACCATCATGTGACGATCATCTCAAAAGGATAAACTAGCAATAGAAGAACT
TAATGATCTGCTCTACTGTCAGGTGGTCGGGGTAGTCGTAGAATAAACAA
ACGAGATGATTGGAGAATCTTCAAATTTTAAATAAACGGGGGGACCTAAT
TATCGGGGAAGGGGAGTTTGAAAACTGTTCTTCTAAATGTCCCCAAAATA
AGTTAACTATACCATAGAGTGAAAAAGCCTAGCTATTTAGAGAAAATAAC
TCTTCTTTTCAGAAATTAATGAATTTAATAAGGTCCGGAGGTTGAAAAAA
AATTGAGAATTAACAAGCGGGGGGAGGTTGTTTATTAGGTACCTGAGAGC
CACTTGTTGGGATCCCCATATCAGTGATAAAATTCTGTTGCATAATACCT
TATCGGGGAAAGAAAAAGTCGGGTTTTAAAAAGTCGGGAAAAATTTCTGT
CATACATCACGCAACCTCTTACGAACAGTATGGCGGAATTCGTCGAACGT
TTAGAGGATAAAATTACCAAAATCAGGTCCCGTATCTGGAAGACCACCGA
CTGTTTTAGTTCGAAAAAAATGAATTTGTCAAATAATTGTATTTCGGAAT
CGGGAAAAAGTATTCAAATGTTTAGGAGTTTAAGAGAATGTTTTGGTGGC
TGGGAGTTTGTGCTCGTTTAGACGATTTGGCGGAATTTCAGAAAAGTATT
GACGAATGGAGGAAACAGAAACGCCCTGAAACCCTCTCCAAAGCCACACA
TTTTTATATATTTCATATAATAGAAGAAATTTCATATATATAAGCTCCGG
ATACAGTTGTGGTTGTTTAATTCAAAGCGCTTTGACGATGACCGGACAAT
TTTCTTGCCGTGTTTAGTCAAGTTTTCAACTTATGAACTCCATCAATGGG
CTGACTGTCTATCCAAGAACGTCTTCCAGAATTGGTCCAACCAGTGCTCC
CTTTAATAAAAGACGACGAATAAATTAAAAGGATTTCGATATGAAACTAC
TTCATTGCGTTCGTCTTTCACTTCCTGTATCACTATCAGTGACCCAGTGA
GATCCATCTCGCTGGATAACCTGGTGAAATAAATTGCCAAAATTGACCTA
ACTGATTTTAAGTTTTCGTTGGAAGACAAGTTCGGACCTGGTCAAATTTT
ATTGAAATTTCTTACCCCGGCCAAAACTTTGAAATAGTATTGTTTTATCA
CGGTCAAAAACGCAATTAGAGTAGCCTTGTAAAAATTGAAAAAAGTAATG
CTTTGAAATGAAATATGTTTTCTTCACTCCGGCAAAAGGCGAGTTAAAAT
CTCTCACCCTAACCCCAATGATCTTAAGATCAAATTTATTACACATTTTT
CATTTTAAGCAACCAGGTTGCTAATAAGTAAAAGTTTCTTAAATGATCTA
ACAATGGCAATAATGATAGCCCTTGATCTAATAAGCATAAAAAATGTATA
ATTTTAGGGGTGGTCAAAGCAAATTTTACATAAAATGAGCTAAAAACTAA
GCAATCCAGGCCCTGACCCGAAAATTGGAGTTGCTTTTACAAAAAATTGA
AATTTTCTATTTTATAGCCACCCAAGTGGTTTTAAAAACTGCATCGGTTC
ACTGAGACAGGTGTTTTTTTCAATAGATATTCTCAACCGGCCCCATCAAA
TTTTAAGCATATAAGCTAATCGACCAAAACATGGTTTACGGAAAATTGAG
ACAGGGGTGCTCCCTGTAAATATGACTTGCATACTCCCAGTAAGGTAAAG
CAACTTTCATTGTTCAAAGGAAACATTTTGTGCAGGGTTTCAATCTTGTC
TAAGACTTACCTGTAAACTTTTGTTCCCTCTAACGGAATTCTCCATTATG
CCATTTATTTCCCACGAATCATCAATATTACCTAAAACACAAATTATTAC
CAAAAGCTGGAAATGGACAAGATGTAACCTTATTTAATGGCTAGGAAGAA
GACATATGCTACGCCAATAATATCTTTCTTAGTTTTTTAGTTTATAAAGG
TATAAAGAACGACGATAAAAGGCATAAAACCAAGTAAAAACTTCCAAGCA
CGAAATGAATTTACTTTTATAATTTGCTGTATACCGTGTGATCTAACGCG
TGTGATGTTAACTTCTCAATTCGGATATTTGATTAGCTGTACCATTACTC
GATGTATTGATTTCGAATACCTTGAAAGAAAAGCGACATCTTCAAATCAT
TCCACCTTCCTACCGGGATAATCTGAATCACATCTTAACCGATAAAAGTA
TGAAACAGATGATATACAACACCATGTCCAAAACCTTTCTTTCATTTTTG
AGCGTCAATCAAGTGGCGTTACAACGTTGTAATAACGTTAAGTTCCGGCT
GGTGACGGGTACTTAATAGAAATATCTAGTTAAACGAAGAATTTACGCCA
CTCACCAAACCAGGCGAAACCAGCGAAATTCTAGAATCATTGAGTCATTG
ACTGTAATCGTATTCTTTTGGGTGGGTTAATTTGAGCCATTTTCCCGACA
TTTAGTCTTTGCAAAAAAATCGCAAACACTTTAAAATTCTCAATTCGCGA
AAAATGTATAGGCAAAAACTAATCCACATAAGGTGATTATGGCGACATTC
TACCTTATTCTTCCCGTCATTGTAAGACATGGAGGAGAGTAAAAGATGCT
ACACGCTTGTGACAGATATGTAATGCGTATTTCAATCGTTATTAGACAGA
TAGGTAGAGAGCCAAAAACCCTCTCGCATGAGACAGGAGTGCAATTTGTA
TTTTTCTTTTCGTTGTGAGACAGAGAGACAAGAAATTTAAAAATTACCAC
TCGCATGAGACAAGGATGTATTATGTGTATTTTTCCCTCCCTCTCGCTGG
GATCCCAACCCCACTAGAAAATTCGACAAAAATTTTGTCACCCTATAATT
TTAGTCCCACTGAGAAAATTACTTTGATTTCATTGCCTTTCAAAATTCAA
TGTTTAAAAATTGCACTCCGAAAGCATCCCCGCTGGATTTTTTAAGCTTG
GCACAATAGAATTTCTATCCCAATTGGAATTTCAGTAGAGTTTCTTTATC
CCCGCTTGTGGGAAAAAGTTCCACCGGGGCTGTGAGACAGGTGTGTCTGC
AAAACATATGAAAGTAATTCATTTGATCTATGAAAAAATTACAGCCCTGT
AAAGCCGTCCGAAGTCATCACGAAGTCGCCAAAATCATCAGGATTTACGG
TATTAAGTTTTGTGACTTTTTCTAGCCACCCTCACTTATTCCGTCTTTTA
CGGGGTTAGGGACATTGGAGTATTGGTCAATATCTTTTTAGTTCTTTAGT
TAATGCTGGGACAGTGGCCTTTTTCTAGAACTAAATACATAGGTCGTGTG
CATATAACCTAGATTTCTATTGGCTCCTCTTATTTTAATCGTCATTATTA
CCTGTTACTTAGTTATTTCACTGATAAAGAAAGTGAAGTAGATCATCAAA
TTTAACGAGGCTGAAATTTGTGTTAAAACTCCTTTGTTGAAATTTAATTG
CTTCTAGTAAAAAATGTTTATATATTTCCTACACTTATTTTTTCGTACGG
GTTTTCTAGAAGTATACTTCATATCGTCGATAGTGAGAAATACGAAAGAT
GGAGCTCGGGTACCTCCGTAGTATTATCGGCCATGTTCCAGCCATCTTTA
TATACGCGCGATCTGAGTGCGAACGCTTCAACTAAATGAAATTAAATCTA
AAATTAAAGAAAACTGGATAGATGAAATTTTTTTTCAATGGGTCATTTTT
TTCTTACATATTTGAAGATTATTTTACAGAAGAAATGAAGTTGCCGTTTT
TTTTCCTCTCTTGCCGTTTTTTATTTATAGGTCAAATTAGCGTGTTTTGC
CCGAGACATCCTATCGCATTTGCACTGGGTTTGGAAAACCCGTTACAAAT
GCACACCCCGTGCAATTGCAAGGATGTGCCAGACTGATTGCGCAGCAGGT
GTGAGTGTTGAACATTTGATGGCCGAGAAAATGGGACTTGCTCATTTCTT
TAAAATATCATGTACTGTTTGCCCTTGGCATATCAAATTTAGTTCCTCCA
AACAATGTGATAGGATTGAAGGAACTACTGGACGTACTGGATATGAAATC
AACCGAAGAACAATAGTAGCGTTCCGGGAAAACGGTCTCGGTTTGTCTGG
TATTGAATCCTTTAGTCGATGTATGAATATGCCTCAACCGATGTCAAAGA
CTACTTTTGATGAAATAAGTAGTAGTATTCATAATGCTTATGTTGAAGCT
GCCCAAGAGTCTATGAATAAAGCTGCAAATGAAGCACGTTTGAAGTATAT
AGAAGAGGATCCTACTAATGTTGACGAAGACGGTGTTACTGATATAAGCG
TAAGCGGAGACGGAGCTTGGCAAAAGCGCGGATATTCTTCTTTAAATGGA
GTAATGACTCTAATCGCAGAGGGAAAA Coding sequence (CDS) from alignment at sc0000392_pilon:45380..50756- >XLOC_017476 ID=XLOC_017476|Name=XLOC_017476|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000392_pilon:45380..50756- (Clytia hemisphaerica_ch_hm2_pilon)
ACAACTGATGAAATCAACGCTGACGCGCAACGTTCTGGTGCTTCTGCTAA
GAAATTGAACATTTCTACTCAATCTGCTATTGATAATCCAACTGAAACTT
GTTTAGAAAACTGTAATTTCATTGTTGAGAGTGATTTGTTTATGTCACTT
ATATTGTCGATTGGCTCATGTATTGATTGCCAGTCAGACAACTGATGAAA
TCAACGCTGACGCGCAACGTTCTGGTGCTTCTGCTAAGAAATTGAACATT
TCTACTCAATCTGCTATTGATAATCCAACTGAAACTTGTTTAGAAAACTG
TAATTTCATTGTTGAGAGTGATTTGTTTATGTCACTTATATTGTCGATTG
GCTCATGTATTGATTGCCAGTCAGGTGTGAGTGTTGAACATTTGATGGCC
GAGAAAATGGGACTTGCTCATTTCTTTAAAATATCATGTACTGTTTGCCC
TTGGCATATCAAATTTAGTTCCTCCAAACAATGTGATAGGATTGAAGGAA
CTACTGGACGTACTGGATATGAAATCAACCGAAGAACAATAGTAGCGTTC
CGGGAAAACGGTCTCGGTTTGTCTGGTATTGAATCCTTTAGTCGATGTAT
GAATATGCCTCAACCGATGTCAAAGACTACTTTTGATGAAATAAGTAGTA
GTATTCATAATGCTTATGTTGAAGCTGCCCAAGAGTCTATGAATAAAGCT
GCAAATGAAGCACGTTTGAAGTATATAGAAGAGGATCCTACTAATGTTGA
CGAAGACGGTGTTACTGATATAAGCGTAAGCGGAGACGGAGCTTGGCAAA
AGCGCGGATATTCTTCTTTAAATGGAGTAATGACTCTAATCGCAGAGGGA
AAAGTGTGAGTGTTGAACATTTGATGGCCGAGAAAATGGGACTTGCTCAT
TTCTTTAAAATATCATGTACTGTTTGCCCTTGGCATATCAAATTTAGTTC
CTCCAAACAATGTGATAGGATTGAAGGAACTACTGGACGTACTGGATATG
AAATCAACCGAAGAACAATAGTAGCGTTCCGGGAAAACGGTCTCGGTTTG
TCTGGTATTGAATCCTTTAGTCGATGTATGAATATGCCTCAACCGATGTC
AAAGACTACTTTTGATGAAATAAGTAGTAGTATTCATAATGCTTATGTTG
AAGCTGCCCAAGAGTCTATGAATAAAGCTGCAAATGAAGCACGTTTGAAG
TATATAGAAGAGGATCCTACTAATGTTGACGAAGACGGTGTTACTGATAT
AAGCGTAAGCGGAGACGGAGCTTGGCAAAAGCGCGGATATTCTTCTTTAA
ATGGAGTAATGACTCTAATCGCAGAGGGAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:45380..50756 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 190-666:478 |
| Aaloc | 1-186:5378 |
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