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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:442946..444438- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001111 ID=XLOC_001111|Name=XLOC_001111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1493bp|location=Sequence derived from alignment at sc0000049_pilon:442946..444438- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTAACTCACAATTGACTGTTAGTTTGGCAAACTGGTTGGAATTACC
TGGATATACATTCAATGAATGGTATGAACAGAAACAATTGAGTCTTGGTA
ATCTACCAAAAGTTCCCAGCGTCGGTGGTGTACATCCAGAGCGTACAAAC
CCTTATTATATAGGGCTTTATTATTCCGACTATGTCAAATATATGGGCTT
ATCATCATTTTTCGTTGATAACGTTTACGTCAAATCCATCTCACAGAGCT
TATCCAACACGTCACAATGGACGGTGGAAGGCGTTCAATATACAGACCAA
CAAACAGGTGAAACGTATACCGTGAAAGCGGACAACATTGTTATGGCAAC
CGGAGCTTTCAATAATCCACGCAAACTCGAGATCCCTGGTGAAGACTTCA
CCTTCGTACATCACCACTTCCCAGATTTCGATCGACTCCAGACACACAAA
TGCCCTGTGGTTGTAGTAGGATGTGGGCTAGTTGCAGCAGACGCAGTCCT
TTACCTCATCTCACGACAGATACCAGTCATACACGTGTTCAGACGTTCGC
CTAAAGACCCTAATCTCGTTCTAAACCAATTATCGTCTGCCTACGCAGAC
TATTTGAAATTAAAATCGCTGATACAGCTCAAATCAAAATGTGAATTTTA
CACGCCACTTCCTCAACACCGATTGGCCGAAATCTTACCCAATAAGGAAG
TACTTATTGAGCCATGTGGTAAAAAGGGCGGTGCCTCGTTCAAAGTTCAC
GTGAGCCGAGTCATCATCCATGTTGGATCAAAACCGAATCTGGACTTCAT
CAAAGAGGAGCATTTACTACGCGAGGATCCAGAGGAAGAATTTAATATAA
AAACAAACTGTTTAGACACTGACCTTTTGACGTATGAATGCCGCGGCCGG
AAGTCGTTATACGCCATGGGTCCACTAGTGGGAGATAATTTCATCCGATT
TGTATCTGGTGGCGCTCTCGGCATCACACATGGTTTATTCCGAAACGAAG
CTGAAAATGAAGATGTGTGAAAAACAGCTGGTCATTTTTCTTCCAAGGAT
GGTTGAAATACAGGTTCACCTTTTTGATGTAAAAAACGTGTTGAAATATC
TGGTCTTTGTGATTAAAGGATACTTTAAAAACAGGTTCTCATTTCTTTCG
AGGATGCTCTGTAGACAGGCTCTCTTAAGCTGTAGGGGAAATGAGCTAAG
TAGTTAGAGAACTTTCAATATATGTAGATAGATAGATGTAAATAAATATA
TCTTTTTGGATATAATCTTTAAATCTAAAAGTGAAAATTTTGGGTCTCCT
TAAAATTGGAGGCGATAGGTGGGGTTTACATATAAAGGTTAGGGCATATG
GGGATTTGAAACACGAAGTTGGGATATTAATGCAGTATGGTAATAAGGAT
TGAACAAACTTACTTTTTCATACTTTGAAAATCTGTTATCAGTTAATAGC
TATCTGTTATTACATTGAAAATGACACCATTATTGTTATTTGA Coding sequence (CDS) from alignment at sc0000049_pilon:442946..444438- >XLOC_001111 ID=XLOC_001111|Name=XLOC_001111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2160bp|location=Sequence derived from alignment at sc0000049_pilon:442946..444438- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTAACTCACAATTGACTGTTAGTTTGGCAAACTGGTTGGAATTACC
TGGATATACATTCAATGAATGGTATGAACAGAAACAATTGAGTCTTGGTA
ATCTACCAAAAGTTCCCAGCGTCGGTGGTGTACATCCAGAGCGTACAAAC
CCTTATTATATAGGGCTTTATTATTCCGACTATGTCAAATATATGGGCTT
ATCATCATTTTTCGTTGATAACGTTTACGTCAAATCCATCTCACAGAGCT
TATCCAACACGTCACAATGGACGGTGGAAGGCGTTCAATATACAGACCAA
CAAACAGGTGAAACGTATACCGTGAAAGCGGACAACATTGTTATGGCAAC
CGGAGCTTTCAATAATCCACGCAAACTCGAGATCCCTGGTGAAGACTTCA
CCTTCGTACATCACCACTTCCCAGATTTCGATCGACTCCAGACACACAAA
TGCCCTGTGGTTGTAGTAGGATGTGGGCTAGTTGCAGCAGACGCAGTCCT
TTACCTCATCTCACGACAGATACCAGTCATACACGTGTTCAGACGTTCGC
CTAAAGACCCTAATCTCGTTCTAAACCAATTATCGTCTGCCTACGCAGAC
TATTTGAAATTAAAATCGCTGATACAGCTCAAATCAAAATGTGAATTTTA
CACGCCACTTCCTCAACACCGATTGGCCGAAATCTTACCCAATAAGGAAG
TACTTATTGAGCCATGTGGTAAAAAGGGCGGTGCCTCGTTCAAAGTTCAC
GTGAGCCGAGTCATCATCCATGTTGGATCAAAACCGAATCTGGACTTCAT
CAAAGAGGAGCATTTACTACGCGAGGATCCAGAGGAAGAATTTAATATAA
AAACAAACTGTTTAGACACTGACCTTTTGACGTATGAATGCCGCGGCCGG
AAGTCGTTATACGCCATGGGTCCACTAGTGGGAGATAATTTCATCCGATT
TGTATCTGGTGGCGCTCTCGGCATCACACATGGTTTATTCCGAAACGAAG
ATGATTAACTCACAATTGACTGTTAGTTTGGCAAACTGGTTGGAATTACC
TGGATATACATTCAATGAATGGTATGAACAGAAACAATTGAGTCTTGGTA
ATCTACCAAAAGTTCCCAGCGTCGGTGGTGTACATCCAGAGCGTACAAAC
CCTTATTATATAGGGCTTTATTATTCCGACTATGTCAAATATATGGGCTT
ATCATCATTTTTCGTTGATAACGTTTACGTCAAATCCATCTCACAGAGCT
TATCCAACACGTCACAATGGACGGTGGAAGGCGTTCAATATACAGACCAA
CAAACAGGTGAAACGTATACCGTGAAAGCGGACAACATTGTTATGGCAAC
CGGAGCTTTCAATAATCCACGCAAACTCGAGATCCCTGGTGAAGACTTCA
CCTTCGTACATCACCACTTCCCAGATTTCGATCGACTCCAGACACACAAA
TGCCCTGTGGTTGTAGTAGGATGTGGGCTAGTTGCAGCAGACGCAGTCCT
TTACCTCATCTCACGACAGATACCAGTCATACACGTGTTCAGACGTTCGC
CTAAAGACCCTAATCTCGTTCTAAACCAATTATCGTCTGCCTACGCAGAC
TATTTGAAATTAAAATCGCTGATACAGCTCAAATCAAAATGTGAATTTTA
CACGCCACTTCCTCAACACCGATTGGCCGAAATCTTACCCAATAAGGAAG
TACTTATTGAGCCATGTGGTAAAAAGGGCGGTGCCTCGTTCAAAGTTCAC
GTGAGCCGAGTCATCATCCATGTTGGATCAAAACCGAATCTGGACTTCAT
CAAAGAGGAGCATTTACTACGCGAGGATCCAGAGGAAGAATTTAATATAA
AAACAAACTGTTTAGACACTGACCTTTTGACGTATGAATGCCGCGGCCGG
AAGTCGTTATACGCCATGGGTCCACTAGTGGGAGATAATTTCATCCGATT
TGTATCTGGTGGCGCTCTCGGCATCACACATGGTTTATTCCGAAACGAAG
TTTTTCATACTTTGAAAATCTGTTATCAGTTAATAGCTATCTGTTATTAC
ATTGAAAATGACACCATTATTGTTATTTGATTTTTCATACTTTGAAAATC
TGTTATCAGTTAATAGCTATCTGTTATTACATTGAAAATGACACCATTAT
TGTTATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:442946..444438 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1003-1080:79 |
| Aaloc | 1-999:1494 |
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