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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:414222..417125+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036809 ID=XLOC_036809|Name=XLOC_036809|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2904bp|location=Sequence derived from alignment at sc0000154_pilon:414222..417125+ (Clytia hemisphaerica_ch_hm2_pilon)
atggGGTCAACAGAAAGTAACTGTCAACATTACCAACGCAAGTGTTTCAT
GGTATCACCTTGTTGTAACAAAGAGTATGGATGTCGTATCTGTCATGATG
AGAATGAAGGACACACATTAAACCGTAGAGAAGTGGAACAAATTGTTTGT
TTACAATGTAAAACTAAACAAAAGGTTTGGAATTTTTAGATCTGAATCAT
ATACCCTTTAAATATTTTCCCATTAGTGATGTAACTTAAATCCCATttga
cttttccagaaaaaatttgaatatgggggtggaggatatataaaatttac
cccccccccggacattgtgacttttgagtCCCCGgaacagcaggtctaac
cccccagACAAACATTAGTTGAACCCCTGGacactcaaaattaccctcaa
acagagcaaattacccccaaacagagcaagtttaccccccggacaagtcA
AATTttggacactatatcctccacccccatatacGAACATTTTTTGTAAG
AGCCCATTCGCTTTAATAAGTGAGTGCCCTTTTTTCctaccatgtggaaa
ccatatcaGCATAATTAGACTGATTCTCTTGAAAATGGTTTGCATCTGGT
AGCAAAAGTGAGTCTACAATTAAAGCAAATGGATTTTAATATTCAATTCG
GATTAAAAACTTATTAATACTGCGATTATTTATTGGTAAGCTCTATCCCG
TAAGGTAAGCCGTTTATATGATTTCCACTAGATGCATTAACAGCtttttt
tAGATGGAtcatttttaaaacaagatGAGTATAGAgagttttcatatttt
gttaGGTTACGTAATTTCTGCCATTATTGAAgccaaacgttcgaatctgt
agagatGAACCCTTACACTAatcgaatgtttgcttccataattgCGAAAG
TTACGTAACATAACAAAATCCAAATAAAGCAAGTGGTTTGGAAAAATAAC
TTCaccctccttttttctttttttatttcaggtgCAAAGGAATTGTGAAG
AATGTGGCATTTTGTTCGGGAGGTACACTTGTCTGACTTGTCGTTTGTTC
GATGATGTTGACAAAAAACAGTTTCACTGTGAAGGTTGCGGTATTTGTAG
GTAGGTCTCTCATCGCTTTTAACTACCTAAGGGTTTAGGTAGGAATAATT
CTTAATAAaaactttaggcgtacaaactttcgctggcagaaactttcgcc
tTTTCCGcgaatttttgcctttttcgcaaaagtaaatgtctttgaaaatt
cttaagaGCTACTCGCAAAAGTTCATGATCGCGAAAAATCCTTCACAAAT
AAGAaattgtaaaacttcaaactttgaataaaatgtaacattTATGCCTG
TTAAAGCCTAAGGACAAAAGTTTCAAGCcaattcaagaagtatttgtctc
taagctattttttcatgtgaaaattttcatttttacgttttggttcgcga
agattttttcgtcaaattcgggaaagtaaatttcgcgattttcggacctc
gcgaaagtttctgcttgtgaaagtttgtacgcctaaaaaGTAATATAAGT
AATACAGTATAATAGGTTATAATTTCAAGCAAGATGTTTTGAGATTTCTT
TAAACAACCATTTCTGGTTCACACTGGTTCAGTAATTTTATAAATGAGAA
ATTGTCATTCGTTCTTTAATTATTCTTACAGAGTTGGAGGATCAGAAAAC
TTTTACCATTGCGACATTTGCAATATGTGTATCGGAATCGGCATTAAAGA
CTCTCACAAGGTATGGAGCAGTATGGAGCCCTTTTTTCCGTCAAAGTCCT
TTTCCCGACACCGCTTTTACTACTACGCACTTGATTGTCCTTCATATAAT
TCCAATACGCTTCTTTAGAGATTGGAATAACAGGATCAttagaatcactg
attgaaaaagatttttcctctgtGACCGCTATAAGCAACGAATaagtttc
aatcagtgattttgACCTTTCTATTATTCCAAACTCTAAAGAAGGGTTAA
GGAATGTCGTTGTAAGAACAACTTACGCtaagacttttagacagtctatC
GATTGTTTTTCACGGCATCCAAAGCCAGCTTGCTCGGCTACCTGTTAACA
GAAGGGGACACAGGAAGGTGCGGGAATTCGAACTATGAACCCCTGGTTTT
TACCGATGACGCCTTGACctcttggccatcgctccttgTATGGTCATTAC
AGAAATATGCCACGCTCATGAATGTGTACAACCAGTAGGGACCTAGGAGC
ACTAGTAGATTCTTGTATAGCTTTTTAAGTATAAAGTTCCTGTTTAAAAC
GGATTTTCATCTCGGCGAGGTACAAAAAGAGACTTGTTTATCTAAAAAAT
CTTTGCTAATTTGTCCATTTCGACaaaaaaaCTTTGCTTGGAACACTGAA
CATTTGTATTAATAACTTTCTTCGATTTTCAGTGTTTAGCGGATTCTTCC
AAACAGAATTGTCCTGTCTGTCTAGAGGTAAACATTCACTTTTCATCACC
CTTTCCCACAAAAGACCTTGTTTCCcttttctaatttgaaaaaagagaTT
AATGAAATAGCTCATGTCCTTTTTAAGGTGAAACTCCAACAAAGAAAATT
CTCGTAACGTTATTCCTGAAgaattttagtttattttatgcttcaaaatt
cttgaaattaacGCGAAGATAGTCTTAATAGGTGACATTTCCATTAACCC
TTGATAGGCCAGTTTTCGGACCAGGTTGGTTGGCAAACTCTgaatccaga
aaaaaatgtacatgTCCCTTACACAGTTTAATAAATAACCTTTTCAACAT
TTCTCATGCAGTACTTACACACATCACGAAAGGTTTTGCACATCCCGCAA
TGTTCTCACGTATTGCATTACGAATGTTATCGAAGCATGCTACAGCAcgg
gtaa Coding sequence (CDS) from alignment at sc0000154_pilon:414222..417125+ >XLOC_036809 ID=XLOC_036809|Name=XLOC_036809|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000154_pilon:414222..417125+ (Clytia hemisphaerica_ch_hm2_pilon)
atggGGTCAACAGAAAGTAACTGTCAACATTACCAACGCAAGTGTTTCAT
GGTATCACCTTGTTGTAACAAAGAGTATGGATGTCGTATCTGTCATGATG
AGAATGAAGGACACACATTAAACCGTAGAGAAGTGGAACAAATTGTTTGT
TTACAATGTAAAACTAAACAAAAGatggGGTCAACAGAAAGTAACTGTCA
ACATTACCAACGCAAGTGTTTCATGGTATCACCTTGTTGTAACAAAGAGT
ATGGATGTCGTATCTGTCATGATGAGAATGAAGGACACACATTAAACCGT
AGAGAAGTGGAACAAATTGTTTGTTTACAATGTAAAACTAAACAAAAGgt
gCAAAGGAATTGTGAAGAATGTGGCATTTTGTTCGGGAGGTACACTTGTC
TGACTTGTCGTTTGTTCGATGATGTTGACAAAAAACAGTTTCACTGTGAA
GGTTGCGGTATTTGTAGgtgCAAAGGAATTGTGAAGAATGTGGCATTTTG
TTCGGGAGGTACACTTGTCTGACTTGTCGTTTGTTCGATGATGTTGACAA
AAAACAGTTTCACTGTGAAGGTTGCGGTATTTGTAGAGTTGGAGGATCAG
AAAACTTTTACCATTGCGACATTTGCAATATGTGTATCGGAATCGGCATT
AAAGACTCTCACAAGAGTTGGAGGATCAGAAAACTTTTACCATTGCGACA
TTTGCAATATGTGTATCGGAATCGGCATTAAAGACTCTCACAAGTGTTTA
GCGGATTCTTCCAAACAGAATTGTCCTGTCTGTCTAGAGTGTTTAGCGGA
TTCTTCCAAACAGAATTGTCCTGTCTGTCTAGAGTACTTACACACATCAC
GAAAGGTTTTGCACATCCCGCAATGTTCTCACGTATTGCATTACGAATGT
TATCGAAGCATGCTACAGCAcgggtaaTACTTACACACATCACGAAAGGT
TTTGCACATCCCGCAATGTTCTCACGTATTGCATTACGAATGTTATCGAA
GCATGCTACAGCAcgggtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:414222..417125 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 418-510:2812 |
| Aaloc | 373-417:2433 |
| Aaloc | 295-372:1683 |
| Aaloc | 175-291:982 |
| Aaloc | 1-174:1 |
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