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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1576979..1580359- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013856 ID=XLOC_013856|Name=XLOC_013856|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3381bp|location=Sequence derived from alignment at sc0000049_pilon:1576979..1580359- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACGATGGGCACGCTTCAAGAACAAACAAGAACATGATGCTTCTTC
ATGGCAAGATTTGAAGAAAGCTAAACAACATAATCGAGGGAAGAATAACA
AGGTATCATTTTTATCCATGGACAACCAGTTCATCCCACCATATAGGCTA
TTCTTCAATAATAAACTCGAGGAAGTCATTGTTTTCTTTAATTCGAGGAA
ACTGTTAAGGAAGTCATTTTGAAAGATTCAATTCCCCCTTCTGGGTTTTT
ACGGGAATGTAAGAGACAGTCTTGGACTTTCCTCTAAATTTCAAAGACTT
TAAGGATAAAAATGTGGCATATTTTAGTCCAACCCAAACAATCATTCAAA
GTACACTCTATGCAAAGAAAAAAAATCACTATTACAGTTATTGGTAAATT
CACGGTGAAAGGTTAAGTTTTTAACAACGCCGGAGTTTTTATTTGCACTT
CTTCCTGCCTGTTTTAGCTTGAGTTTCCAGCGTCAGTTTATGCTCTATTA
TTTTGTAGGGCGGAAAGGAGGAAGAAATACCGGAATGGCTAGAGAAAAGA
AGAGCTGCACGTCGTGAACGCAGAAAACGTGGGAAGGTTTGATTTTACTT
TACTCTTTGCTAACAAAATGAAGGTCATGAAAGAGTATTGTCAATGATAC
TGAACCTAACTTTCAACTTTTCTAAGTTAAAAGTTAGTCAAATGTGACAC
AAGATATTGAAGTCAATTCGTTTTAAGTGTGTTTGCTATTAAGTGTAAAC
CACGTCAGTTTAATTTGACTAATTGCCTCTGGAGTGGTTTTCACAGGCGA
GGGTAGCAAAAAAGAGAGCATAATAGCACAACGCACCGAATCTAGTCTAC
ACAATAGACAGTTCCGGGCTTTTAGGCCTTACTCTTTGTCTATAGGCACT
GCTATAGGCGGGCGGCCACTAGTAACCCCCACCGAGAATTGCTTATTAAT
ATGTTTAAACATAATAGACAACTTTCACAAAAGATGTTTATCAATAGAGA
TTTCAAATAAAAGAATGCTTAAAACACAACTGATTGGCTTAGGTTTCCAA
ACTCTCTATTGTTTTATTACAACCTCAGTGCGCATGCGATTTATCTGGAG
AATTTCAATATTCCAAACAAGAGCAGTGCTCATATCCCGAAGAGTAGGAG
TTTTACGCTCGAAACGGAGGGAGATATGACGTAGCCTAACCGAATCTAGA
AATAGTAACAAATCTGCACAAATATACTTCGCTTGTACGACCTGCGATCC
CATCCTCCTTTGCGTTAAATTGCTTTTGTACGTTAATTAATTACAATATC
AAAGGAAATGTAATAACTTTCACGGTTTCCCAATCGTACAAATTTCTAGT
TGAAATAATTATGACGTGTAAGATGCGGAACATAATTGATTTGAATAGAC
TGAAGGTCCTTTTGAAGTTCCGAGGATTTACTTTATTTTGTTTTTGAACC
TTTTCAAATTTCTTTCTTTCTTCAGCCATGCTTTCATTGTCGAGAACCAG
GCCATATGGCTGCAAGATGTCCGAAAAAAGGCGAAGGAGAAAGCGCACAA
GACATTTGCTTCAAGTGTGGTTCAACGGAGCATAGCATCTATCAATGCAA
GAAAGACACCGGTGGTATGTCGTATCTTCATGATTTCAAAAATTTAGATC
TGTTAAGTTTACCAATTTCACTCTGATTATTTACTGAGCATTTGTATTTG
TAATTTGTCTTAAGTTAAGTTTAGTGTTAAATCCAGTTAGCAGAGCAGTA
TTCGAATTTCTTTCAGAGTGGTGATCTTTCTCCACTGTAAACGGTTATTA
GTCTGAATGCTGAATGGAATCATAAAAGACGGGTTAATCGTGAAAAAAGA
CTCTGCCCCTTGCCTATTTGAAACTGCTAGGTATAATTGAAGTTTTATTA
TATCTAGACTACATTACTAGGAGCCCCACGACAAGGCCTTTGTTTCAACT
AAGATAAAAGTTCAAATAAACTCAGTTTGTTCTAGGCGTACAAACTTTCG
CGAGCAGAAACTTTCGCGATTTTCGCGAATTTTGGCCTTTTCGTGAATGT
AAATGTCTTTGAAAATTCTTAACGGGGTAATACGCGAAAGTTTATGTTCT
CGAAAATTCTCAAAAAAATGGAAATCTAATAAAACCTCGAAATCGTAATG
AATATCAAATTTTCGGCATATTTTTATCCTTTAATGCCTTTTTAAAGTCG
AAGAGCTACCGTCTTTATCAGATTTAAAGAATATTTCTCACTTTTAAGGC
AGAAAATTCCCATTTTTATCCAACGATTCGTGAAAGTTTATGCTCGCGAA
AAAACATTTTTTTCATCAAATTCGCGAAAGTAAATGTCGTAAATTTTGCG
ATTTTTCGAACTTGCGAAAGTTTCTGCTTGTAAGCCTAAAGTAATCAGAA
TGACTACCTTTCTCTCTTTATAGATGACATGCCGTTTGCAACCTGTTTCA
TTTGTAAACAGAAAGGACACCTTTCAAGTAAATGTCCAGACAACCCAAGA
GGTTTATATCCTGACGGTATGAGCTTTTATTTTAGGAGCACAGATATACC
AATAAGCCTGACAGGAGTTGTTTATCAGTGTAATACAGTAATAGAGGTGT
TACAATAATATACGGGATAATATCCATATACGTATAAACTACACTTTGTC
CCATCGATTATTTTTTGCTTGATTTCTGGTATGTCTTATTCAAGAGGGCT
CTTACTTGAAGTAACACGGTACAGTTGACGCTCTCTAAATCGACTTTCTA
CTATTCGATACTCTCCATAACTCGATAATATTGTAACTCACCATCAGCAA
GAAACTCTCATAAACGACGCTCGCCTATTCTATTCGTTCTAATCCATTAC
TCGATTAAAATCCAATTTAAAATCGAATTTGAGAGCGTCAACTATATTTA
TTTTTCTAATGCCATGTTTCGTAGAATATTATCGAGCGTTTATTTCTCTC
CTCATTTTTAGGTGGTGGTTGTCGATTTTGTGGTTCTGTTGAACATTATC
GTCGAGATTGCCCAGAAAGGAACCCCAACAAGAATAACGGTTCATAATAT
GTTTATCATTTATACGCAGTGCTATTCTTTTCAACATGATAACACTGTAT
CTTTAGGGGTTTTTAGAGAGTTCACGTTTTGCTTGCAACTTACGAATTGG
GGCGGATTGGGGTGTTTTTGATCGCTTTGCGTTCCTCTGCCCTTGATTTT
AGAAATAACAATAACAATATTTTCATTTGTTGATCGTTTTATAGGTGAAC
GCAAACAAACGTTCAAGATGAGAACACAGTCTAAAGAGGAAAGTATAGAG
GCTATCGATAACTCATCAGACGATGAAAGTGATCATAATGAAGCGCCCAA
ACCAAAAAAAGCTAAAGTCGTCAAATTTTGA Coding sequence (CDS) from alignment at sc0000049_pilon:1576979..1580359- >XLOC_013856 ID=XLOC_013856|Name=XLOC_013856|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1254bp|location=Sequence derived from alignment at sc0000049_pilon:1576979..1580359- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACGATGGGCACGCTTCAAGAACAAACAAGAACATGATGCTTCTTC
ATGGCAAGATTTGAAGAAAGCTAAACAACATAATCGAGGGAAGAATAACA
AGATGACACGATGGGCACGCTTCAAGAACAAACAAGAACATGATGCTTCT
TCATGGCAAGATTTGAAGAAAGCTAAACAACATAATCGAGGGAAGAATAA
CAAGGGCGGAAAGGAGGAAGAAATACCGGAATGGCTAGAGAAAAGAAGAG
CTGCACGTCGTGAACGCAGAAAACGTGGGAAGGGCGGAAAGGAGGAAGAA
ATACCGGAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGCAGAAA
ACGTGGGAAGCCATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCAA
GATGTCCGAAAAAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAAG
TGTGGTTCAACGGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTGC
CATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCAAGATGTCCGAAA
AAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAAGTGTGGTTCAAC
GGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTGATGACATGCCGT
TTGCAACCTGTTTCATTTGTAAACAGAAAGGACACCTTTCAAGTAAATGT
CCAGACAACCCAAGAGGTTTATATCCTGACGATGACATGCCGTTTGCAAC
CTGTTTCATTTGTAAACAGAAAGGACACCTTTCAAGTAAATGTCCAGACA
ACCCAAGAGGTTTATATCCTGACGGTGGTGGTTGTCGATTTTGTGGTTCT
GTTGAACATTATCGTCGAGATTGCCCAGAAAGGAACCCCAACAAGAATAA
CGGTGGTGGTTGTCGATTTTGTGGTTCTGTTGAACATTATCGTCGAGATT
GCCCAGAAAGGAACCCCAACAAGAATAACGGTGAACGCAAACAAACGTTC
AAGATGAGAACACAGTCTAAAGAGGAAAGTATAGAGGCTATCGATAACTC
ATCAGACGATGAAAGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTA
AAGTCGTCAAATTTTGAGTGAACGCAAACAAACGTTCAAGATGAGAACAC
AGTCTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAGACGATGAA
AGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTCGTCAAATT
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1576979..1580359 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 493-627:136 |
| Aaloc | 415-489:419 |
| Aaloc | 322-411:957 |
| Aaloc | 181-318:1907 |
| Aaloc | 103-180:2874 |
| Aaloc | 1-102:3382 |
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