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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000240_pilon:139742..141301- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014217 ID=XLOC_014217|Name=XLOC_014217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1560bp|location=Sequence derived from alignment at sc0000240_pilon:139742..141301- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTGACGTCACTATCACCTTTATCGAAGTCGCGACATTTGTGTCACCT
CTTGGATGCCATTCACAGCAAATGCATTGAGAAATCCAAACAAAAGTTCA
AAGAACAAACTCTCTTCGAGATCATCACGTACCAGTCAAAAGAACAAGTT
GAAAAAGAACTATCAACAAAAACGCACAATGAGAAACTTGCCATTGATAT
TCTCTTACCTGAACTCAAACTCTTATTCTTTCAAATCTCAGGCGAACGCT
ACACACCATCCGAACAGTCGTCTCTGTCCGCAAAATGTGGAAGCGAATAT
TCGTACGATTTTGATGTCCGAAATTCAGATTCTTCTCTTTTTGCAGCTGT
GTTGACAAACCTGAAACTGAAAGCTTTCTTAAAGAATGATGATCCGGCCA
TGTTTCACTGCGCATCGAGGATCTGTCAGAAGTTGAACGATTTAAATGGT
CCAGTTATTACCTCAGATATTATAGAGACACTAAAGAAAAGAAGCATATC
CGATTATACGATTTTCTCTGGTGATTTACAATCGTTAAAAATGCAGCTAT
TGCATCTGGAAGGTCCTTCGGATAAAGAATCTAAATTCACATCTATTGCT
AGAGAGAAGACTCGAATTGACTTTTTGGTAAGGAAGGGAGGGAATCTGTA
CGGTGATAATGTTTCAGTTGTTGACTCACCAAAACTAGATGAGTTTGGTG
AGATCATCTTTGAAGCTGGTATGAATGAGATCACTTTATCAGGCTCTTTG
AGGACCGAACTCAATAGTGAGTGTTTTGAAGAAGAGAAAAAGGAAGAAAC
AATGAAAGCGAGCCACACGCAAGAAAAAATAAACATTACACGAGAAAACA
GTGTCAACAACAGGAAACAGTCAACGTCACAACAACCAAAAGAAACAGTA
CTAAATCTTGAGGATCCCCCTCAACCATCAATAGATGATCAGGATGAAAA
TGTCTTTTTTGAGGAAATAGACGAGAAAGATGCCATTCAATTGCGAATGT
TGAAAAAGAAAACTCCTTACGAACCATTGGGAAGTGACTCTACCATCAGT
TCAGCTGCAAGTAGTTTTGCACAGAAATCCACCAGTACAAGGAAAGGATA
TGTAGCATTGGATATTGATCCTGGGGAAGCTGGAGATGTCTCTGATTTAG
ATGATGACGAGACTCCATCCAGTCTCTTCTCTGGGTCCGACCACACACGT
GGGAGTCGCAGATCAAGCACTTTTAACAAGGAGAGCCGGAACCAAGAATC
AAAGAAGGACCTCAATGCAACCACTAAGAACCCGATCATCAAGAAAACAG
CTACGGGCGGTTTGAATGTCGCCAAAGTGTGGATCAACCTTGCGGCGCCA
ACACATCTTCAATCCTACCAAACTGACACAGAGCAAGATGTGAATCTGGT
GATGGTGTTGGTCCCTGCAGCCAGTTGTTGGATCCCCTCCACTGTAGAAT
GCATCAAAGCTTTTGAGATGTTGGCTACCCAAAGAGTACATTGGAATTAC
ACTGTGCTGTCTGCATTGATGGGCCAAGGCTTGCCAGAGAGCGGAAAACT
ATTGAAAAAG Coding sequence (CDS) from alignment at sc0000240_pilon:139742..141301- >XLOC_014217 ID=XLOC_014217|Name=XLOC_014217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3120bp|location=Sequence derived from alignment at sc0000240_pilon:139742..141301- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTGACGTCACTATCACCTTTATCGAAGTCGCGACATTTGTGTCACCT
CTTGGATGCCATTCACAGCAAATGCATTGAGAAATCCAAACAAAAGTTCA
AAGAACAAACTCTCTTCGAGATCATCACGTACCAGTCAAAAGAACAAGTT
GAAAAAGAACTATCAACAAAAACGCACAATGAGAAACTTGCCATTGATAT
TCTCTTACCTGAACTCAAACTCTTATTCTTTCAAATCTCAGGCGAACGCT
ACACACCATCCGAACAGTCGTCTCTGTCCGCAAAATGTGGAAGCGAATAT
TCGTACGATTTTGATGTCCGAAATTCAGATTCTTCTCTTTTTGCAGCTGT
GTTGACAAACCTGAAACTGAAAGCTTTCTTAAAGAATGATGATCCGGCCA
TGTTTCACTGCGCATCGAGGATCTGTCAGAAGTTGAACGATTTAAATGGT
CCAGTTATTACCTCAGATATTATAGAGACACTAAAGAAAAGAAGCATATC
CGATTATACGATTTTCTCTGGTGATTTACAATCGTTAAAAATGCAGCTAT
TGCATCTGGAAGGTCCTTCGGATAAAGAATCTAAATTCACATCTATTGCT
AGAGAGAAGACTCGAATTGACTTTTTGGTAAGGAAGGGAGGGAATCTGTA
CGGTGATAATGTTTCAGTTGTTGACTCACCAAAACTAGATGAGTTTGGTG
AGATCATCTTTGAAGCTGGTATGAATGAGATCACTTTATCAGGCTCTTTG
AGGACCGAACTCAATAGTGAGTGTTTTGAAGAAGAGAAAAAGGAAGAAAC
AATGAAAGCGAGCCACACGCAAGAAAAAATAAACATTACACGAGAAAACA
GTGTCAACAACAGGAAACAGTCAACGTCACAACAACCAAAAGAAACAGTA
CTAAATCTTGAGGATCCCCCTCAACCATCAATAGATGATCAGGATGAAAA
TGTCTTTTTTGAGGAAATAGACGAGAAAGATGCCATTCAATTGCGAATGT
TGAAAAAGAAAACTCCTTACGAACCATTGGGAAGTGACTCTACCATCAGT
TCAGCTGCAAGTAGTTTTGCACAGAAATCCACCAGTACAAGGAAAGGATA
TGTAGCATTGGATATTGATCCTGGGGAAGCTGGAGATGTCTCTGATTTAG
ATGATGACGAGACTCCATCCAGTCTCTTCTCTGGGTCCGACCACACACGT
GGGAGTCGCAGATCAAGCACTTTTAACAAGGAGAGCCGGAACCAAGAATC
AAAGAAGGACCTCAATGCAACCACTAAGAACCCGATCATCAAGAAAACAG
CTACGGGCGGTTTGAATGTCGCCAAAGTGTGGATCAACCTTGCGGCGCCA
ACACATCTTCAATCCTACCAAACTGACACAGAGCAAGATGTGAATCTGGT
GATGGTGTTGGTCCCTGCAGCCAGTTGTTGGATCCCCTCCACTGTAGAAT
GCATCAAAGCTTTTGAGATGTTGGCTACCCAAAGAGTACATTGGAATTAC
ACTGTGCTGTCTGCATTGATGGGCCAAGGCTTGCCAGAGAGCGGAAAACT
ATTGAAAAAGTTCGTGACGTCACTATCACCTTTATCGAAGTCGCGACATT
TGTGTCACCTCTTGGATGCCATTCACAGCAAATGCATTGAGAAATCCAAA
CAAAAGTTCAAAGAACAAACTCTCTTCGAGATCATCACGTACCAGTCAAA
AGAACAAGTTGAAAAAGAACTATCAACAAAAACGCACAATGAGAAACTTG
CCATTGATATTCTCTTACCTGAACTCAAACTCTTATTCTTTCAAATCTCA
GGCGAACGCTACACACCATCCGAACAGTCGTCTCTGTCCGCAAAATGTGG
AAGCGAATATTCGTACGATTTTGATGTCCGAAATTCAGATTCTTCTCTTT
TTGCAGCTGTGTTGACAAACCTGAAACTGAAAGCTTTCTTAAAGAATGAT
GATCCGGCCATGTTTCACTGCGCATCGAGGATCTGTCAGAAGTTGAACGA
TTTAAATGGTCCAGTTATTACCTCAGATATTATAGAGACACTAAAGAAAA
GAAGCATATCCGATTATACGATTTTCTCTGGTGATTTACAATCGTTAAAA
ATGCAGCTATTGCATCTGGAAGGTCCTTCGGATAAAGAATCTAAATTCAC
ATCTATTGCTAGAGAGAAGACTCGAATTGACTTTTTGGTAAGGAAGGGAG
GGAATCTGTACGGTGATAATGTTTCAGTTGTTGACTCACCAAAACTAGAT
GAGTTTGGTGAGATCATCTTTGAAGCTGGTATGAATGAGATCACTTTATC
AGGCTCTTTGAGGACCGAACTCAATAGTGAGTGTTTTGAAGAAGAGAAAA
AGGAAGAAACAATGAAAGCGAGCCACACGCAAGAAAAAATAAACATTACA
CGAGAAAACAGTGTCAACAACAGGAAACAGTCAACGTCACAACAACCAAA
AGAAACAGTACTAAATCTTGAGGATCCCCCTCAACCATCAATAGATGATC
AGGATGAAAATGTCTTTTTTGAGGAAATAGACGAGAAAGATGCCATTCAA
TTGCGAATGTTGAAAAAGAAAACTCCTTACGAACCATTGGGAAGTGACTC
TACCATCAGTTCAGCTGCAAGTAGTTTTGCACAGAAATCCACCAGTACAA
GGAAAGGATATGTAGCATTGGATATTGATCCTGGGGAAGCTGGAGATGTC
TCTGATTTAGATGATGACGAGACTCCATCCAGTCTCTTCTCTGGGTCCGA
CCACACACGTGGGAGTCGCAGATCAAGCACTTTTAACAAGGAGAGCCGGA
ACCAAGAATCAAAGAAGGACCTCAATGCAACCACTAAGAACCCGATCATC
AAGAAAACAGCTACGGGCGGTTTGAATGTCGCCAAAGTGTGGATCAACCT
TGCGGCGCCAACACATCTTCAATCCTACCAAACTGACACAGAGCAAGATG
TGAATCTGGTGATGGTGTTGGTCCCTGCAGCCAGTTGTTGGATCCCCTCC
ACTGTAGAATGCATCAAAGCTTTTGAGATGTTGGCTACCCAAAGAGTACA
TTGGAATTACACTGTGCTGTCTGCATTGATGGGCCAAGGCTTGCCAGAGA
GCGGAAAACTATTGAAAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240_pilon | genome | sc0000240_pilon:139742..141301 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1560:1561 |
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