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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:831393..835966- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031558 ID=XLOC_031558|Name=XLOC_031558|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4574bp|location=Sequence derived from alignment at sc0000112_pilon:831393..835966- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGACAGATGTGATATGCCAGTTGGCTTATGACGGGAAACTGGAAGA
ATTGCAAACGAAATTGAGGACCGATTTGAAACTGGCAAGCAAAAAGTTTC
AGGTAAGTAATGTCTACTTTTTTAGTTTGTGTAATTTTTAGTGGGTCTTT
GGTGATCTCATCATAGTTTAAAGTCTAGATGTAGTGATAATACGCTGTTC
TCGAGATCTTCAAAATCATCGTGTTTGAACACGGACGTTGGGAATTATAA
CTTTAGCAAGCGATGGCGATGGCAACAAAATTTGGAATAATTTTGTACAC
TATTGATAAGAGTGTTTTTAAATCTCTTCGAAATACAATTTCCTTCAATA
GAGAAAAATTCGTGTTTTTAGGAACTATATTTTATACCACTCTCCTGAGG
ATAAAAGAGACCGATGTTCTAGTTCGAATTAGAGAGAGTTGGCTGAATTT
TTTAGAAAGATAATTTATTCGCGAAGCGGAAAGAAAGACAAGACACGGGT
GTTTGGTGCAATTTTTATGACAAAAAACGCGGACTTCCGTATGTAGATAA
CATTACAGAGATGTATTGAGTATCGAGATGCATCATAAGATTAATCTCTC
ATAAAAGTCCTCTTAAACGCTAAGCATCATTTCACAGTTGAAGTATTTCT
CAAGAGATTACCTTGCTTAAAATAGTAACAATATCACTTTTGGACGATAT
TATTGATGTTTTTTTTGTCTAAGGAGTAAAATAAAATCGATAACAAATTT
TCTTGGCATCGACAGTTATGATTCATTTTTTCATTCGAGTTAAAACGATC
AAGAAGTCAGAAAAATAGCAATTGCTTTATTATGTAGCTATAGTTTGCGA
ATGGACCAAAATTATATTCTGATTTTGATGTCAACTTTATGATTTCAGAT
AAACGCATAGTAAAGGTTAGACACGATCGAATGTTGATAGATGTATACCC
AAAAGAGCATGCGACACTGACATTCCTACCTTCGGCTACTTTGATGGGAT
TACATTTTCGCTGGGATTAAATTTGGTGGTTTAGCTCATCTGCATAATTT
GACATTTTTTGAGTTTTGTTTAAAAATATTTTGCGGATAAGGCCTTTCCA
AATTTCCATTGGGACTTAAATTTCGCGGATGACACCCAAATCCGCGAAAT
TTAATTACAGCCAAGTTTTATCCCATTAAAGTATAAGGTTTTGATTAATC
TACCCTGTTTATTCAGAACTCCCGTATAATGGGTAGATATACCGGTACTA
TGATGAGGAGGATAAGCATAAATATCCCCGTCTAAATAATTATTTTTGTC
TCTTTGCAGGACGAACGTCAACCATTACATTGGGCATGTTCAGGGGGCCA
TGACATTATCGTGGAATATCTTCTAAATGTTTGCAATGCCCCCGTCGACG
AACCCGATGACGTAAGTTATTTCTTAATCCTCAAAATATTTGTAATTGTT
AACTGACTTGGTCATTTCGACAAGGGGTCACTATCCGTCCCAAAGAAAAT
GAAACAAGAGAGTGGGCAGAAAGTTTCGTGGGCAGAAAGTTTCGCGAAGT
CAAAAAGTCGCGAAATTTAGCGAATTTAAGTTTCGCGAATTATGGTTTTA
GCCGAAATTTCACAGATAGAACTTTCGCGAATTCATATAAAATTTACCTT
TTTTGGTAACAAAAACTTTTCAGGTTTAATTTCTTACCTGGCCGAAACTT
TCGCGAAAAAGGATCAAAATCGCGAAAAACGCGAAAGTTTCTGTCCGCGA
AAGTTTCTGCCCTTAAAGTACTTTAGAAGGTAATTCCGCGAGAAATTCTG
AAGAGTCGACTTTCAAAGGTTTATTTTCAAGTGAAAAAGGATCTATCTAA
AAATCTTTCTTTCGTCATGAGCTTTTCTTTAATATGTGGCACAGTTTCTG
GTCTGACACATTTCGTTTTGATGATTGTGAACTAAGCCAGGTTTATATCT
CTTTTGTTAAGAATTTAACGAAAATACATAATTAAATCAAGTAAAAACAG
ACGGATCGCGAAAATTAATCTTCGCCAAACTAAAAATTTGTTTTGCTCTC
CTGAAGTATTTCATTTCTATTTGTCCATTTTTCTAAATAGTCTGGTTGGA
CGCCTCTCATCATCGCATCTTCAGCTGGTCGTGAAAATATCGTCAAAATG
CTGTTAGATAAAGACGCCAACCCAAACAATCTGACTGCCACCGGACAATC
CGCCCTTCATTATGCCGCCTCTCGCAACAGATACAGGGTAAAGGCCGGAC
TCCACTTTCGCGCGAAATGGGCGACAGTTTTCTTAACCTTTTTTGCCTGA
AGAAAAGATTACGTCATAAAAAAGTTTCGCGCGAACAAAAAAAAAAGTTG
AAGGAAGTTCTACTTTTTTCATCCGTTACGTCAATTTCGAACAATGGAAT
TGCTTCATTTTTCAACCGACCTTTACAACAACGTCAAAATGTTTTTGCTC
ATGTCGCGCGAAAGTGGAGACCGACCTACGTAAACACATTTTTATAAGCA
TGCAATCGAGGATTATAGGAAGGGCTGGTTCGAAGAAAATACGTACAAAG
ATACATTCTTTTTTATATGTATCAAAATCAATATCATTGCAATACTCGCT
CTCAAATAGAATAATTACTTCAAACCACCTACAGGTTTTTTTTATAAGAA
CATCCAAAAATTTTTGAAGCCTTTGGATGACTTTTCAGTTTCCAGCGTTT
TCCTAAAAAAATGGTGTTTTAGTGTCAATTAAAGCTTTAAAATGTTAATC
TTAAATTTTGGCCATCGGAGCCTTATATTCTTATATAATTTCTTATAAAA
AAGTGTAAAACTTACTCTTTCCCTTTTTATATCCAAGGAACTTGATCATA
TCTTTCTATTATTTGTAGATAGCGGAACTGCTGGTTGCTTCAAACGCAGA
ATTGAACGTTCAAGATCAAACGTCATTCGCCACGCCTCTCCACAGGGCTG
CTTCAAAGTAAGACCAAATTCTTTTCTTTTCAAAAAGATCCTCTTTTTGA
ACAAGCCTAGTTTGAGTGTATTTGGAAGCAGGGAATTTTCCTAAAATCGG
CTTGATTTTCAAGTGGTTTAGTCATTTTGTCTGGACTCTTAACTGGATGT
CTAAAGGGGAGTGAGGGGTGCTTTGGTTCTATAGGTGTCCGTGAAATTTT
CTGGTTTCGAATTGAGGCCTTATAAGTGAAAAGCTGCAGAGTTCAGTAAA
TTCTATAATATACAATGAAAAAAGAATTCATATTCATATTCGGAGTCGTA
GCCGCGAAGTTTCGGTTTCGGGGAATGAGATTGGGAAAATTTTAACCTTT
TTAAGGGTTTTGCCTTAAATATGCTCAAATGCATTAGAATAGTTTTTCTT
TTCATTTAAGAGGTAATTTGAAGATCGTGAAATTATTGTTGGAGAACGAG
TGCAATCCTAACTTGAAAGACGCTGAAGGAAATACTCCACTGTAAGTCAT
TAGTTTGTTTTTGAAAGGGAAGAATGTGGTATTGACCTCGAAACAGGGGG
ATTTGGATCAAGTTAAAAAGAGTGGAATGATTTCAAATGTCTGTATATAT
TTGGTGTGCATTTGGTATTATTTTATACTGGCAGGCTCGACCCGATCCTA
TTTTAACACAAGGGTTAAAAGGTGTAAGGCTCCCCTCCCCATTTAAAGGT
TTATCACAGAGCCTCGATCTGCTCCAAAAAGATGAGGTGTTCTTACGGAA
CATTGTTATCGGGATCTGCTTATAGATTATAAATATATAAGGTTTCAAAA
TATTGTTAAAATCTAAGTTAATTTTACATCTGTGATATTGGTTTTGTGTT
ATTTTCTAATAGCCATGGGTTCAAAAATCGAAAACCAAAAAGAAGAATAA
TTTTTAGAAAATGGTGCTACTTCCAAAGACCCTCATTAGCATATTTTCAT
TGCGCTGAAGCGATTTCGAGGGGCTAAAACCGGCTGGAATGTGTATTTTG
GTCACAAGACCGGTTTTTAGGGCTCTAAAGTTAGCTATTTTGGCAATCTC
TCATTAACTCAACTTTTTTTATTTCCAGACATTTAGCATGCGAAGAAGAA
CGAACAGAAGTAGCAGAAATACTGATCCAGTATGGTTCATCCATTACCTT
ATTCAATAAGGTGTGTATAAACTTAGCTTGTGTGTTTTGAAATACGAAGG
TTGGCTAGCCAGCCTTTTGTGATGTGAAAAACTTCCAAAGAAAATGGTAG
TTGGTACTGCACTTGAAATACAAAATATATTACTGTCTTGTTAGAAAGAT
TATTTTTGAGTTTTCTGAAAAATCATCAAAATTTGCCTTGTCCGGGGGGT
CAACTGATGCTTGTCCGGGTGGTAAAACCCGTTGTCCGGGGGGACCAAAA
GTCACTTTGTCCGGGGGGTAAATCACTGAAAATTGTTATATCCTCCATCC
CCATATTCAAATTTTTTCTAGAAAATCCCATTTCATATTTTAATTTTCGA
AAATTTAAAGCCTTTGTTTACCTCAATTCATTTCTTTTATCCGCAGGAAG
AGAAAACACCAATCGAACTCGCTCCTCCCTATTTACAAAGGAGACTGGCG
GAGAGTGAAGACAGTAAAAGTTGA Coding sequence (CDS) from alignment at sc0000112_pilon:831393..835966- >XLOC_031558 ID=XLOC_031558|Name=XLOC_031558|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000112_pilon:831393..835966- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGACAGATGTGATATGCCAGTTGGCTTATGACGGGAAACTGGAAGA
ATTGCAAACGAAATTGAGGACCGATTTGAAACTGGCAAGCAAAAAGTTTC
AGATGTCGACAGATGTGATATGCCAGTTGGCTTATGACGGGAAACTGGAA
GAATTGCAAACGAAATTGAGGACCGATTTGAAACTGGCAAGCAAAAAGTT
TCAGGACGAACGTCAACCATTACATTGGGCATGTTCAGGGGGCCATGACA
TTATCGTGGAATATCTTCTAAATGTTTGCAATGCCCCCGTCGACGAACCC
GATGACGACGAACGTCAACCATTACATTGGGCATGTTCAGGGGGCCATGA
CATTATCGTGGAATATCTTCTAAATGTTTGCAATGCCCCCGTCGACGAAC
CCGATGACTCTGGTTGGACGCCTCTCATCATCGCATCTTCAGCTGGTCGT
GAAAATATCGTCAAAATGCTGTTAGATAAAGACGCCAACCCAAACAATCT
GACTGCCACCGGACAATCCGCCCTTCATTATGCCGCCTCTCGCAACAGAT
ACAGGTCTGGTTGGACGCCTCTCATCATCGCATCTTCAGCTGGTCGTGAA
AATATCGTCAAAATGCTGTTAGATAAAGACGCCAACCCAAACAATCTGAC
TGCCACCGGACAATCCGCCCTTCATTATGCCGCCTCTCGCAACAGATACA
GGATAGCGGAACTGCTGGTTGCTTCAAACGCAGAATTGAACGTTCAAGAT
CAAACGTCATTCGCCACGCCTCTCCACAGGGCTGCTTCAAAATAGCGGAA
CTGCTGGTTGCTTCAAACGCAGAATTGAACGTTCAAGATCAAACGTCATT
CGCCACGCCTCTCCACAGGGCTGCTTCAAAAGGTAATTTGAAGATCGTGA
AATTATTGTTGGAGAACGAGTGCAATCCTAACTTGAAAGACGCTGAAGGA
AATACTCCACTAGGTAATTTGAAGATCGTGAAATTATTGTTGGAGAACGA
GTGCAATCCTAACTTGAAAGACGCTGAAGGAAATACTCCACTACATTTAG
CATGCGAAGAAGAACGAACAGAAGTAGCAGAAATACTGATCCAGTATGGT
TCATCCATTACCTTATTCAATAAGACATTTAGCATGCGAAGAAGAACGAA
CAGAAGTAGCAGAAATACTGATCCAGTATGGTTCATCCATTACCTTATTC
AATAAGGAAGAGAAAACACCAATCGAACTCGCTCCTCCCTATTTACAAAG
GAGACTGGCGGAGAGTGAAGACAGTAAAAGTTGAGAAGAGAAAACACCAA
TCGAACTCGCTCCTCCCTATTTACAAAGGAGACTGGCGGAGAGTGAAGAC
AGTAAAAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:831393..835966 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-681:79 |
| Aaloc | 523-603:546 |
| Aaloc | 442-519:1214 |
| Aaloc | 352-438:1707 |
| Aaloc | 205-351:2485 |
| Aaloc | 103-204:3266 |
| Aaloc | 1-102:4575 |
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