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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000030_pilon:15502..18456+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041253 ID=XLOC_041253|Name=XLOC_041253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2955bp|location=Sequence derived from alignment at sc0000030_pilon:15502..18456+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTAAGCACTGCTCCACGCCGTTTGACGAAAGGTCAAAAACAGTCAG
AGACATGATGCCAAAATACAAGACAAATATAACGActcaaacaaagcaaa
caagAGCTGATGTAAGAATGACTTCTTTCATGTTTTAACCTAAGTGTTTG
TTAGGATATgtcgctaccttaattcaaaaggggcctaagtccaggtACTC
CCCAGTTCAAAAGGGCCTTagtccatttttatgaaatttgaaatctttgg
tTTTTCTCGATGTCTGGCTCATTTGCAATCTTTTGATGTACAtaacaagt
agtttttaaaTATGAAAAGGATCATAACTTCATACTGAAGCTCTGATAAA
Agtgatgtttaattcaaaagaggcctaagtccatcaactttttacaaaga
agggcctaagtccatcataTTTTTACAATAAAGGGCCTAAGTCGTCCATc
aaaataagtttgttaagTTTAAAAGAGGCCTAAGTCAAATTGAGTCCATG
TatcctaaaaagtttaattgagtttttctttaaCTAACTGAGAttgtttt
ttctctttatcttgaaTCTAGGTGTAAGTGGCTTTAATTTGGATTGTCAT
AATTAATTGCaggttttgaacttttaaaggCAGAAATTAACCCTCACACA
TGTTTCTAAttcatgtttaattcaaaaaaaggCCAAGTCAATTCTGCAAG
ATTTACTAAGTTGCACCTGGTACGTACAAAAATATCTATTTTCCAAAAGA
ATacctttttattgaaaaaacaaGTTCAAgctatggctttcagaaaacat
ttacttcaaagctttaccatcaaaaatggtttcagaataaaggaaaaact
ttaattgctattttctcaaaatgaccaaaatggacttaggccccttttga
atttaGGCTCACAGGagttaggccccttttgaattaaggtagcgatGTGT
ACACTCCGTTCGACGAGTTTTTTCTAGTTTTATACGAATTCCTGATTGCA
ACACACTCGTAACAGCTAGCTGTGCAGTGGTTCTTCCTATAAAGCTTAAG
GATatagaaatttgtaaaatcaatatttctcatctcattgttttaataaa
aaagcaaactcaaaaacaaagacatttttaatTGGTCTTGGGAATACTTG
CAAAATATGTTTTTGTTGGCATTAAGTAACAAAACCTTTTTTAGTAAGTA
AAGTATTAAGgttcttgaaattctttttgtttacttttattttcagattt
acACCCTGCGACGAGATCACCATCAGGAGGTAGTTTGTCTAACTATCAAA
GAGAACAACGGCAGATACAAGGTGCGCTaaagtattttctttaattttta
gttCATTAAACAACAATTTCTCACTGCAAAACCtttttagggttgggttt
ttgggcttttttatttttcctggTGCTCAAAAATCTTACTGACTGAGCCA
GccttctttgtttatttttgtttaggtTGATGCTTTGACGACAAAAGGTT
GGGCCTCTTCCTTCTGGAGTCATCACGAAGAAAAAGGTGCTCCAGCTTAT
TTATTGAAACGTTGCTTGGAGAAAGCCATCACTACAGGTATTTATCATTT
TAAGATTTACTCTCAGTTTTTATGATATTTACAACAATTCTTTTCGTATA
ATTAATCTTGTTTGTGGTATAAGAATCTTTTTCAGTATTTGATCATTTtc
gtcttcaaaaattttaattgaaggtTGGTAACACCATTCATAGTtcggga
tgacaccttccaaaaaagtgaagaaggggggcgagatcagaaattttcat
taaaaaggggtGATAGCAAGGAGGGGTCCTTTAAGAAGGGGGgccgttta
agaaggggggcttacatatattgtagattattttccagcactatTATGAA
ATGTGGTCTGCataattggaaaatttttctgtttgagtaGTTTGAGTCGT
TTGAGTCAACAATAAGCAAGAAAgaagtttgttattttttctcttttttc
tctttttctatcTGAAGATATTTTCACATAATATTTGcttagcccaaaac
ccttgaaggataggcatttttaaaagttggggggatgccaagaaggggga
tcagacccctttccgcaccaTGCCATTTCAAAGCACGTTTTTCTTAATTC
TGTTTTTTATTTAGATCCGCCATTAAAAGACAACGAGGTCGAATTTCTAG
TTCAACTGGACGCTGGTGTTGAAGGTTTTTAACATTCTTTTGTGACATTT
ACTCTGTAGACCAACTTTTTATGCTTGAAAAATTGAGCAGTTTTAGGACT
GAAAACTAGTAATTTATAGGTCATATAATTTgtggtagaattttttttaa
attaacaaAATGTCTTTTTATAATTTAGATTCTCAAAATGAAGTTGAGAA
AGAAAATACTGACCCAGTACAATCTAAGACAAGTAAGTTTTTCAATTCAT
TATAAAACTCGTAATTACAGTAATTCCACAATAGTAAACGACCCACCCTT
TCTCAAATCCCAATGGAGTATGAAACCCATGGCACACAATATCTTAATAA
ATCGTTTTACCTCATTTAAGATTCTCAAACTATCGCTATGGCAAAAGTAA
ATGAGGTAAACTTACAACAGCATCAGCAATCAAAAACAGGTAAATGATAT
TTTTACTACATGGTATGTTTTTATAATGTTTGAACTACCACGAACTTTCG
ACCCATTTAATAATAACTTCATCAAATGtgctttttgttttaatttattt
caggATCTCGCAGTGGgcctgttttcatttttttttgcaagtttTATAGA
CCCAAGGACTTAATgcattttaatattttgcacAAACTTTCAAACGGGTA
TCTCTCCATATTTTAAAGGCAAactaatttttcattgaaatgttTTATTC
AGGTTGTCGTAACAACATCAATAAAAATGCTGCCCAAGAAATTTCAAACA
CAAGT Coding sequence (CDS) from alignment at sc0000030_pilon:15502..18456+ >XLOC_041253 ID=XLOC_041253|Name=XLOC_041253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1068bp|location=Sequence derived from alignment at sc0000030_pilon:15502..18456+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTAAGCACTGCTCCACGCCGTTTGACGAAAGGTCAAAAACAGTCAG
AGACATGATGCCAAAATACAAGACAAATATAACGActcaaacaaagcaaa
caagAGCTGATATGTGTAAGCACTGCTCCACGCCGTTTGACGAAAGGTCA
AAAACAGTCAGAGACATGATGCCAAAATACAAGACAAATATAACGActca
aacaaagcaaacaagAGCTGATatttacACCCTGCGACGAGATCACCATC
AGGAGGTAGTTTGTCTAACTATCAAAGAGAACAACGGCAGATACAAGatt
tacACCCTGCGACGAGATCACCATCAGGAGGTAGTTTGTCTAACTATCAA
AGAGAACAACGGCAGATACAAGgtTGATGCTTTGACGACAAAAGGTTGGG
CCTCTTCCTTCTGGAGTCATCACGAAGAAAAAGGTGCTCCAGCTTATTTA
TTGAAACGTTGCTTGGAGAAAGCCATCACTACAGgtTGATGCTTTGACGA
CAAAAGGTTGGGCCTCTTCCTTCTGGAGTCATCACGAAGAAAAAGGTGCT
CCAGCTTATTTATTGAAACGTTGCTTGGAGAAAGCCATCACTACAGATCC
GCCATTAAAAGACAACGAGGTCGAATTTCTAGTTCAACTGGACGCTGGTG
TTGAAGATCCGCCATTAAAAGACAACGAGGTCGAATTTCTAGTTCAACTG
GACGCTGGTGTTGAAGATTCTCAAAATGAAGTTGAGAAAGAAAATACTGA
CCCAGTACAATCTAAGACAAATTCTCAAAATGAAGTTGAGAAAGAAAATA
CTGACCCAGTACAATCTAAGACAAATTCTCAAACTATCGCTATGGCAAAA
GTAAATGAGGTAAACTTACAACAGCATCAGCAATCAAAAACAGATTCTCA
AACTATCGCTATGGCAAAAGTAAATGAGGTAAACTTACAACAGCATCAGC
AATCAAAAACAGGTTGTCGTAACAACATCAATAAAAATGCTGCCCAAGAA
ATTTCAAACACAAGTGTTGTCGTAACAACATCAATAAAAATGCTGCCCAA
GAAATTTCAAACACAAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000030_pilon | genome | sc0000030_pilon:15502..18456 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 484-534:2905 |
| Aaloc | 415-480:2573 |
| Aaloc | 361-411:2381 |
| Aaloc | 301-357:2167 |
| Aaloc | 187-297:1476 |
| Aaloc | 112-186:1247 |
| Aaloc | 1-111:1 |
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