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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:1202840..1208979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015312 ID=XLOC_015312|Name=XLOC_015312|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6140bp|location=Sequence derived from alignment at sc0000066_pilon:1202840..1208979+ (Clytia hemisphaerica_ch_hm2_pilon)
tttgcaattttagcaGCACTAATTTGTGTGGTGTGCTCTTTCCCAGAAGA
AGGTAAGTCCCcattttttccgacccttagtgggactgagattaaatttt
tgactttttaacttttacaGAAACATCCAGCTTCCAAAATGGCACCCTTA
ATACCGGCAAATCCGTACCCTTCGCTTGCCTAGGTAACCCATCCGGGAAG
TAAGTCCATCTAGCCTTTATCAAGAAATAAAGTACCAACCTTTCTTGCAG
GTATTGCACTTTCTCGTATGAGAAGTACAAATCAAAGAGTAACTATTCTT
GGCTTTAGGGATAAATGaatttctttcttcaatttAGGTTGTCCGGGTAT
CTAGATTTATGGGATATAAAGTTAGTATaaaaaaaGGGAATATCATCAAT
GTGACGCCGATTGCTAGGTGAACTTATGATTAATTTTCAAGAATCAGAAA
TATTCGTCCATCAATAAGGGTGATTGGAGACTTTTTGGGTGTCAGTTAAT
TAAATAGCTGTCATTAAAACGATTAATCTTTTTGCCTCAAATCTCAAATT
CCGTTTCTACATTTCATTTAACCTTAAACATaccatatttttagaaaatg
atgACAAGGATGGCTTATTATATGCGGGTGACATGATGTTAACGCCCTTA
CAACGTATGGTGATAGAAACGGGCGGAGATTTGAGTCGTGTTAGAGGTGA
TTTGACTGCAAGGGCTGCAATGAAGAACATCAATGTGTTATGGTTACCTA
ATGATAAAACTGTTCCCTATACTATTGATGATTCGTTAGGTGAGTTGAAT
TATAGCAACCCCAGCTGCTAAAcgacgttatttgaacgttaataCAACGT
CTTGTGTATGTTATGGACGCTAGGTGAATCTCTTTTGGACATTCTGTATC
AGGATGCTCAAACCCAACGTTTTTACATATGTCTAAAAGGTATTTTTGTT
GGTCTTCGTAATATAGGACCTTACGATCCGACATCCGAGATAGATTCTTT
TTAATGTAAAACTCCAGCCTAGGTTATAAGTAAGTTAACTTGAACAAGGT
TCATGAAAGGTAGCTTCACTATGCGTGACCGGCAGTTagatatttcaaat
aaaagcatTTTCAAGccccccccGGAACTATAACAAATTGGCGTGCTTAA
TTACTTTGGCTTCAAAAAGGTTATACTGTATCTGTCCTGAAACCCTCCTT
tctaaatttgtaatttttttctattattcagTGGACGAACCAGAAGCCAC
TTTGGGAATGATGAAGGCTTTTCGTGAATGGGAAGAAAGATCATGTTTAA
AATTCAAACGAAGGGATCAGGAAGAAGATTACATCAATTTCTTTAAAGAA
GGAGGGTAAGGAATCAGGTGGAGGATACTATGCCAGTAGAGACTGGTGCT
TTATTTTTTAAGTTGTTCTAATAGACACGAGAAATAGCCGATTAAAATTA
ACAATTTTCTGTTCACTTTCTTTAGCTGTTGGAGTTATGTCGGTCGTCAA
GGTGGTGCACAAAATATTTCTCTAGGGGATGGTTGCTGGGATATCGGTAC
CGTGGTTCATGAAATTGGTAAGAGCTTATTTCAAAATCGTGTCTTTCAAA
GTAGAGAACCTTTTTCAGAGCTAATAAAAACTTAGCAGTTGGGTTTGATT
CTAGTTTTGACCGTGGTGAAAAGTAGAGGTTTCGGCTAAGGGCGTAGGTT
CTATCCCCGACCGGGTCCTACCAAAGACATCataccacagatctgtaaag
ccagaagggctagatttgcggcttttatcgaaaagtgaagcctaggtttg
gaaggatttcctaccaaagtcacgtgactaaaaaatgcaatttcaccggt
ttgagagatgtgaaatagcgtttgcatGACGCTCAGCAGTTGAACAGATC
AATTTTTACTAACCTCGTTTGAGGCTTTTAAAAAAGCTAAGGAGTCAGCA
TTTTTGGTTGATCCATTTCTTAAATTTAAGATTACCTTTCCTTTGCTTTC
AGGCCACGCAATGGGATTCGGACATGAGCAAAACCGTCCGGATAGAGACC
AATATATCAAAGTCCATTGGCAAAACGTTCCAGAAAGTAAGTTTAAAGAA
CGCAAATTCTATGATCAGAGCATGCGGATTGCATATTTCACGGATTGAat
catcatattttcaaaatatttccaaatttttgaaatatcatattaccaaa
agttggaaatattttgaaaaaatgatatttcaatgaatttcagatttgga
aatatcatgaaatatgatatttttattttaaaaagtcatgtttccatatt
tacaaaaagttGTCAACCGTCAGTTGAACGAGTTCAACGGCCAGTGTCAA
CCGTCTATGTGTCACGAGCACCTTTACAGCCCTGTCTCAGTCGACCACGC
GACCTTTACCTGACGGGGCGTCACCACTAGAAAAATTGATATGTTTGGAG
ATGTAAGATCTTGGTTTTCCCATTTATACAGACTTTATTTGCGCTTCTTT
TATTTTCTACTATAACGAGCGATGGACACCTTTGAGTTATCTAGGATCGA
GTAATCAACCATGGGAAAGATTCTACTCAtagacaaaaatttattttcat
cacCTACAGGAAAAAGACACAACTTCCAAAAATACAACGATTCCAAAGTG
GACAGTTTGAACTCCACTTACGATTACAAATCCTTCATGCAATATTCAAA
AACGGCTTTCGGTATCAATGACTCACTAACCTTAGATCCCttacaaaaag
atatttttcaactGGGACAGCGAGTCGGATTCACAAAGGATGATCAATAT
CAAGCTATGGAACTTTATCGATGCAATGGTATGTTGAATAACATTTCTTT
CAcaagtttcaaaatatttcttctctTTTATGTATATCCTGTAATTTGCA
ACTATAGACTCCtgtttcacagacccggtggcaCCCAAACTATTGGGAAG
TTGGCCAAAGTTTCTTCTCCGATGAGAAGTAGCCCACGATTTCAGCCACA
TTGGCAaattaattgactttaaaggaAGCCCCAAAACTATTCTACTGGAt
ttttttGAGCGGGGAACAATAGAAATCCCCACCatgggaaaaagtttcac
cgggctGCGTGAGACAGGGGGGTCAGTATGTGAGAATCTAACAATTtatg
atacacccctgtctcgcagccccggtgggGCTtctttcctcagtggggat
aaagattcatattgaaatcccaaacggggatagaaattctattgttccaa
ggttaaaaaatctagtggggatggttttggagtacaattttcaaacattg
aattttgagtgggatgaaatcaaagtgaatatcccagtggggctaaaatt
ccagggtatttttccagcggggacgaaatttttgccaaattttccagtgg
ggctggggtcctagcgggtctgtgacacaggggtgttatgaTTTAGTATA
GACGTTTTCTTCCTTATACCCCATGACACATTTTAATGTCTTTGCAGGTA
AAACAACGCGTCCAACACCAACTTATGAAAGATATATTCCAAAAGGTAAA
ACATctcgaaaaaatcttttcacttGACTTCTTGTGTCTTGAAACTCTGT
AAAAAGTGCTAATGTGGCCACTAAGTTACTTCAAGGGTAAGGTATCTTGT
TTATAAAAGTACAGTTTTTGGGCATATGAGTTGAGGACAAGCAAAATTTA
AAGGatcaagaatttttgaaatcagaAGTTTTAGGGTTAAAGCGTGCAAA
TTTTGATGCTTTAGGACGTAAGGTAATATCATTACGAATctcttaaagat
tttgtttttaaataagagtggcattgtttgcttactcatcaattttaatt
cacaagctttttcacattgattaACATGGATGTGGagtaagattggtcag
aaaggggggggggagaactggggagaaaaacatttttttgcttatatcag
catacaCTGTCCTAagatgtgtctgatatgaaacgggaacacttgtaaaa
acaaaacttttaaaaaagctTGCGCGCGATCTTTCGTAAGGCCTTATGTA
AAagtttacgtacatgtgaaaaaagcttaattttACCTAGGTGATGATGT
TTGTGACTTTGAAAATGGGTTATGTCATTATACTCAAGATGATACGGACG
ATTTTGATTGGTCAAGAAGATATGGAGGTACCCCATCAGGAAATACAGGA
CCTGAAGCAGATCACACTACTTCTAGAATGGGTATGAAATGATAAGTTTA
TAAGTTATGTTGTTACAAAGtataattttacaaaaatgaataTTCTAGAT
AAAATGGTCTAGTTCCCTTCAAATTTGTAATTTAGGGTaaaaaaaaCAGG
TAAACTACTAGAATAGTAGGATTTCCTGTATGTGCGGACCGGACCTTCAA
AAACCAACCTTAAAAACCTAAACTCaattattttatgaaaagaaagttaC
CCTTAGAGGGACAAAATCGGTGATATAAGTGACCTTTTTTAGCCTCGATA
ATTTTTAACTAATTGGGAAACGATTTTGACCTCCATTAATTCTTCactat
aaattttttcttttcttcaccTTCCTTTTAGGTGTATTTGTTTACATCGA
AGCCTCCTCCCCTCGTCGTCTTGGAGACAAAGCAAGACTCATGACCAAAG
TCTTCCCAGCATCGAAAGACCAGCAATGTTTATCATTCTTCTTACACATG
TTCTCAACGAATAAAACCATGATGGGCCAGTTCAACGTCTATTTGGTTGA
TGATAATGGCCAACAAAGAATTTTGCAAAAGACTGGCAGCCAGGCTGTGA
ATGATTGGACAAATGTTCAAATGAAGTTCAGACCATTCGGCAATTACCAG
GTGAAGTCAATTTCTTAAGTATTTTGTAATTAAAACAGAAATTCGATGAT
GTTAATGCTGTATTGTAATTTGTAAAAAGATCCGAGACAAAATAAGATGA
TAACGCAAGTGCACTTTGGTTATCATTCCATACGGGAAAATTTACCTATC
AAAATCTGCGAGCAATGAAAAATTGCGCAAGGCCGCAAAATTATCATAAA
GTCATTTTCAATGAACAAagaaatgtataattttcactAAGGGAAGAAAA
TTAGAATTCAGACCCTCGTTGAAAAATTcgtatgtttttgttttatacaa
atttgtgtacatgaaaaattgaaaatatccaTTCTAAGCTTTTAATTTAG
TTTTGAATTAACTCTTAACTTTGTTTTAGATCGTATTTGAGGGTGTCCGT
GGAACTAGTTACCAAGGAGATATCTCTTTAGATGACATCACATTCACCAA
AAACCAATGTCCAAGAAATGAAGCCAAAAAAGCACCATCGAAGGCCACTG
GAGGTAAAAATACAATTTCCTAGCCATCATTTCTTGCTAGATTGTTAATG
CGTTATCGAAATATCGAGACACTTTATCTAGCACTCCAATAGATTTTGGA
ACCTCAGCTCAAACTAATTCAAACCATATAACTTGTACCCAATCTacgtt
ttgatttttcaaatgaaTATCAATGAAACACAAAAACAGCAATAGGAAAC
ATCCAAAGAAATCCTGACTATCCTTCTAAAgtttttttgtacaattatta
aACTGATCAATTTCGAACATTGCTATTAGGTTGTTGATTAAGAGCTTCTA
CACGTTCTTTTATCAGAACCCAGTTTATTGGAATATTTGGGGGAAAATAG
AACATCATATTTGGTCAGCCTAAGAATTGAAAATCTAGCCAAATTTGTTC
CTAATTATCTGAATTcatatgaaaatttcaatcgaGATTgcatttaatta
ttttaattccCAACTTTAAATTTGAGCAGTTTTTGACGAAAAGCTTTTAT
AACCAAAGGTAATTAATTCTGTgaataataagaacattttaggctcaaaa
ttgcCATAAAAAAGACTCAGTCGAAatttaaaccttcaaaatatAATGTG
TATTTTATCTCCTTAAGATGGTACGTGCAAGGACACCAAAGACCGTGAAG
CACGCTACTGCCAACAATGGAAGGATGCTGGTTATTGTCAATCACAACAA
AAATACATGTCGCGCTTCTGCCaaaaaaaCATGCAGTTTATGTTAGATGG
AGAATATGGAAAAGTGAATTTATTGAAGATTACCgattaa Coding sequence (CDS) from alignment at sc0000066_pilon:1202840..1208979+ >XLOC_015312 ID=XLOC_015312|Name=XLOC_015312|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000066_pilon:1202840..1208979+ (Clytia hemisphaerica_ch_hm2_pilon)
tttgcaattttagcaGCACTAATTTGTGTGGTGTGCTCTTTCCCAGAAGA
AGtttgcaattttagcaGCACTAATTTGTGTGGTGTGCTCTTTCCCAGAA
GAAGaaaatgatgACAAGGATGGCTTATTATATGCGGGTGACATGATGTT
AACGCCCTTACAACGTATGGTGATAGAAACGGGCGGAGATTTGAGTCGTG
TTAGAGGTGATTTGACTGCAAGGGCTGCAATGAAGAACATCAATGTGTTA
TGGTTACCTAATGATAAAACTGTTCCCTATACTATTGATGATTCGTTAGa
aaatgatgACAAGGATGGCTTATTATATGCGGGTGACATGATGTTAACGC
CCTTACAACGTATGGTGATAGAAACGGGCGGAGATTTGAGTCGTGTTAGA
GGTGATTTGACTGCAAGGGCTGCAATGAAGAACATCAATGTGTTATGGTT
ACCTAATGATAAAACTGTTCCCTATACTATTGATGATTCGTTAGTGGACG
AACCAGAAGCCACTTTGGGAATGATGAAGGCTTTTCGTGAATGGGAAGAA
AGATCATGTTTAAAATTCAAACGAAGGGATCAGGAAGAAGATTACATCAA
TTTCTTTAAAGAAGGAGGTGGACGAACCAGAAGCCACTTTGGGAATGATG
AAGGCTTTTCGTGAATGGGAAGAAAGATCATGTTTAAAATTCAAACGAAG
GGATCAGGAAGAAGATTACATCAATTTCTTTAAAGAAGGAGGCTGTTGGA
GTTATGTCGGTCGTCAAGGTGGTGCACAAAATATTTCTCTAGGGGATGGT
TGCTGGGATATCGGTACCGTGGTTCATGAAATTGCTGTTGGAGTTATGTC
GGTCGTCAAGGTGGTGCACAAAATATTTCTCTAGGGGATGGTTGCTGGGA
TATCGGTACCGTGGTTCATGAAATTGGCCACGCAATGGGATTCGGACATG
AGCAAAACCGTCCGGATAGAGACCAATATATCAAAGTCCATTGGCAAAAC
GTTCCAGAAAGCCACGCAATGGGATTCGGACATGAGCAAAACCGTCCGGA
TAGAGACCAATATATCAAAGTCCATTGGCAAAACGTTCCAGAAAGAAAAA
GACACAACTTCCAAAAATACAACGATTCCAAAGTGGACAGTTTGAACTCC
ACTTACGATTACAAATCCTTCATGCAATATTCAAAAACGGCTTTCGGTAT
CAATGACTCACTAACCTTAGATCCCttacaaaaagatatttttcaactGG
GACAGCGAGTCGGATTCACAAAGGATGATCAATATCAAGCTATGGAACTT
TATCGATGCAATGGAAAAAGACACAACTTCCAAAAATACAACGATTCCAA
AGTGGACAGTTTGAACTCCACTTACGATTACAAATCCTTCATGCAATATT
CAAAAACGGCTTTCGGTATCAATGACTCACTAACCTTAGATCCCttacaa
aaagatatttttcaactGGGACAGCGAGTCGGATTCACAAAGGATGATCA
ATATCAAGCTATGGAACTTTATCGATGCAATGGTAAAACAACGCGTCCAA
CACCAACTTATGAAAGATATATTCCAAAAGGTAAAACAACGCGTCCAACA
CCAACTTATGAAAGATATATTCCAAAAGGTGATGATGTTTGTGACTTTGA
AAATGGGTTATGTCATTATACTCAAGATGATACGGACGATTTTGATTGGT
CAAGAAGATATGGAGGTACCCCATCAGGAAATACAGGACCTGAAGCAGAT
CACACTACTTCTAGAATGGGTGATGATGTTTGTGACTTTGAAAATGGGTT
ATGTCATTATACTCAAGATGATACGGACGATTTTGATTGGTCAAGAAGAT
ATGGAGGTACCCCATCAGGAAATACAGGACCTGAAGCAGATCACACTACT
TCTAGAATGGGTGTATTTGTTTACATCGAAGCCTCCTCCCCTCGTCGTCT
TGGAGACAAAGCAAGACTCATGACCAAAGTCTTCCCAGCATCGAAAGACC
AGCAATGTTTATCATTCTTCTTACACATGTTCTCAACGAATAAAACCATG
ATGGGCCAGTTCAACGTCTATTTGGTTGATGATAATGGCCAACAAAGAAT
TTTGCAAAAGACTGGCAGCCAGGCTGTGAATGATTGGACAAATGTTCAAA
TGAAGTTCAGACCATTCGGCAATTACCAGGTGTATTTGTTTACATCGAAG
CCTCCTCCCCTCGTCGTCTTGGAGACAAAGCAAGACTCATGACCAAAGTC
TTCCCAGCATCGAAAGACCAGCAATGTTTATCATTCTTCTTACACATGTT
CTCAACGAATAAAACCATGATGGGCCAGTTCAACGTCTATTTGGTTGATG
ATAATGGCCAACAAAGAATTTTGCAAAAGACTGGCAGCCAGGCTGTGAAT
GATTGGACAAATGTTCAAATGAAGTTCAGACCATTCGGCAATTACCAGAT
CGTATTTGAGGGTGTCCGTGGAACTAGTTACCAAGGAGATATCTCTTTAG
ATGACATCACATTCACCAAAAACCAATGTCCAAGAAATGAAGCCAAAAAA
GCACCATCGAAGGCCACTGGAGATCGTATTTGAGGGTGTCCGTGGAACTA
GTTACCAAGGAGATATCTCTTTAGATGACATCACATTCACCAAAAACCAA
TGTCCAAGAAATGAAGCCAAAAAAGCACCATCGAAGGCCACTGGAGATGG
TACGTGCAAGGACACCAAAGACCGTGAAGCACGCTACTGCCAACAATGGA
AGGATGCTGGTTATTGTCAATCACAACAAAAATACATGTCGCGCTTCTGC
CaaaaaaaCATGCAGTTTATGTTAGATGGAGAATATGGAAAAGTGAATTT
ATTGAAGATTACCgattaaATGGTACGTGCAAGGACACCAAAGACCGTGA
AGCACGCTACTGCCAACAATGGAAGGATGCTGGTTATTGTCAATCACAAC
AAAAATACATGTCGCGCTTCTGCCaaaaaaaCATGCAGTTTATGTTAGAT
GGAGAATATGGAAAAGTGAATTTATTGAAGATTACCgattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:1202840..1208979 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1351-1521:5970 |
| Aaloc | 1225-1347:5230 |
| Aaloc | 958-1224:4584 |
| Aaloc | 817-954:4093 |
| Aaloc | 769-813:3500 |
| Aaloc | 550-765:2612 |
| Aaloc | 466-546:2005 |
| Aaloc | 373-462:1477 |
| Aaloc | 250-369:1234 |
| Aaloc | 55-246:597 |
| Aaloc | 1-51:1 |
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