XLOC_016659 (mRNA) -

Overview
NameXLOC_016659
Unique NameXLOC_016659
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000471_pilon:14711..15557+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016659 ID=XLOC_016659|Name=XLOC_016659|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=847bp|location=Sequence derived from alignment at sc0000471_pilon:14711..15557+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGACTACAAAGGAGCAGGAGACAATGAATGCTTTTCGTGAGCGACAATC AGAGAAgattaaaatggtcaaaaagttCGAAAAGGTTGATCTTTGTTCAA AGAGGGAATGCATTAAATCAAAAGTACGTAAAAACTTCATGGAAAAGGAA GTTAGACTAAACACGCCACACTTTGCAGTCCATCAGTCTAGACCGAAACG TACACTGTCACCAGAACAAACAGAAAACCCTGAATGCAACCGAAACACCA GAACAAACAGAAACACTGGAACAAGCCGAAACACTGGAACAAGCCGAAAC ACTGGAACAAGCCgaaacactggaacaaaccgaaacaccaccagaaccaa ccaaaacaccaccagcaacaccggagccaatcaaaacacTGGAACAATCA AAACACCACCTGGAACACTGGAGCcaacattttttgaacaaaCCCCGCCA GCATCACCCGAAACATGTAAGAAATTACAATCAACAGAACAGACATCGAC AGTAAGACGCTCATTGACTTCCCCTCACCAACACTGGACATTACCAGGAG CGGGAAACCCTGGTGATTTTAAGTGGAGCTTCGTCAAGACCTCGTGAGTC AAACTTTGAGACCAAATTGAACGAACTAAAAGACTGGATGAAAATTGAGT TCAATAGAATCCATGCCAGAATTGACAAAATAAATGACATTAAAATGAAT GACATTGGGCAAATTGACAATtttctcaacaacaacaaccttaAATATTG GATAACATCACCACAAGAACAAGAGAGAGAAGTTGAAGTCACGGCCACAA AAGTCCAACCAAACGCAACTGCCGAACAACCATTAGCAGTCGAGACA

Coding sequence (CDS) from alignment at sc0000471_pilon:14711..15557+

>XLOC_016659 ID=XLOC_016659|Name=XLOC_016659|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1694bp|location=Sequence derived from alignment at sc0000471_pilon:14711..15557+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGACTACAAAGGAGCAGGAGACAATGAATGCTTTTCGTGAGCGACAATC
AGAGAAgattaaaatggtcaaaaagttCGAAAAGGTTGATCTTTGTTCAA
AGAGGGAATGCATTAAATCAAAAGTACGTAAAAACTTCATGGAAAAGGAA
GTTAGACTAAACACGCCACACTTTGCAGTCCATCAGTCTAGACCGAAACG
TACACTGTCACCAGAACAAACAGAAAACCCTGAATGCAACCGAAACACCA
GAACAAACAGAAACACTGGAACAAGCCGAAACACTGGAACAAGCCGAAAC
ACTGGAACAAGCCgaaacactggaacaaaccgaaacaccaccagaaccaa
ccaaaacaccaccagcaacaccggagccaatcaaaacacTGGAACAATCA
AAACACCACCTGGAACACTGGAGCcaacattttttgaacaaaCCCCGCCA
GCATCACCCGAAACATGTAAGAAATTACAATCAACAGAACAGACATCGAC
AGTAAGACGCTCATTGACTTCCCCTCACCAACACTGGACATTACCAGGAG
CGGGAAACCCTGGTGATTTTAAGTGGAGCTTCGTCAAGACCTCGTGAGTC
AAACTTTGAGACCAAATTGAACGAACTAAAAGACTGGATGAAAATTGAGT
TCAATAGAATCCATGCCAGAATTGACAAAATAAATGACATTAAAATGAAT
GACATTGGGCAAATTGACAATtttctcaacaacaacaaccttaAATATTG
GATAACATCACCACAAGAACAAGAGAGAGAAGTTGAAGTCACGGCCACAA
AAGTCCAACCAAACGCAACTGCCGAACAACCATTAGCAGTCGAGACATTG
ACTACAAAGGAGCAGGAGACAATGAATGCTTTTCGTGAGCGACAATCAGA
GAAgattaaaatggtcaaaaagttCGAAAAGGTTGATCTTTGTTCAAAGA
GGGAATGCATTAAATCAAAAGTACGTAAAAACTTCATGGAAAAGGAAGTT
AGACTAAACACGCCACACTTTGCAGTCCATCAGTCTAGACCGAAACGTAC
ACTGTCACCAGAACAAACAGAAAACCCTGAATGCAACCGAAACACCAGAA
CAAACAGAAACACTGGAACAAGCCGAAACACTGGAACAAGCCGAAACACT
GGAACAAGCCgaaacactggaacaaaccgaaacaccaccagaaccaacca
aaacaccaccagcaacaccggagccaatcaaaacacTGGAACAATCAAAA
CACCACCTGGAACACTGGAGCcaacattttttgaacaaaCCCCGCCAGCA
TCACCCGAAACATGTAAGAAATTACAATCAACAGAACAGACATCGACAGT
AAGACGCTCATTGACTTCCCCTCACCAACACTGGACATTACCAGGAGCGG
GAAACCCTGGTGATTTTAAGTGGAGCTTCGTCAAGACCTCGTGAGTCAAA
CTTTGAGACCAAATTGAACGAACTAAAAGACTGGATGAAAATTGAGTTCA
ATAGAATCCATGCCAGAATTGACAAAATAAATGACATTAAAATGAATGAC
ATTGGGCAAATTGACAATtttctcaacaacaacaaccttaAATATTGGAT
AACATCACCACAAGAACAAGAGAGAGAAGTTGAAGTCACGGCCACAAAAG
TCCAACCAAACGCAACTGCCGAACAACCATTAGCAGTCGAGACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016659XLOC_016659-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000471_pilongenomesc0000471_pilon:14711..15557 +
Properties
Property NameValue
Aaloc562-846:563
Aaloc1-561:1