XLOC_034691 (mRNA) -

Overview
NameXLOC_034691
Unique NameXLOC_034691
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000072_pilon:450149..458671+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034691 ID=XLOC_034691|Name=XLOC_034691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8523bp|location=Sequence derived from alignment at sc0000072_pilon:450149..458671+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTAACGTNCGCGTCGCTCAAAAATCGTACGGAAACGAGAAACGATT CTTTTGTCCGCCACCAAGTTTATATTTGAAAGGTGAGACAAGGtccaatt tgtttttctttattcttGCAAACAACAACAGTTGACTCCTTCAATTTGAA GATCAAgagaccaagaattttcttcaattaaagaaaaattcgaattatag aagttcgagttagaGAGAAAGAGATAGTTAATTGTTAACAACTCGATAGT TGAATTTTGTTCAGGTCCACTAGTTCTCCCTTTACTAGAGATGTTCAtgt agtttttgttttgtttacagcCAAACAAAAGTTGTATTAGTAGGGGTATT ACAGGCACACTGTATTATAAAATCAGGAAGATTTTACCATGGTTGAATTC ATTCAGCTCGGAAAATGCTGTATTACTACGCGCTTTttaaaaaccaataa aattgataaccttataccttatcggccctttttgcgccggcccttattgg cgttattcttgggctcgtggcgtaaaaagggccggtgttaaaagggccgg cgtaaaaagggccgataaggtagtgcgtttattcgaagtgatTATATACT CTCtttttttCGACTTAAGGTAAAGGCTGGAACAAACGAAGGGATCGCCA TGTAGCGGAGAGCAGCAAAACGAACGAAGCAACCAACAACCCAACGACCT CTTCATCATCATCGACCAACAACAATAGCAATAATAATAATGACGTCAAT AATTGTTTATACCCACACGCGCTAGTGTACATCGGCCCTTCCGAACATCC TCTAATGCAACAGTTAACCTTCGAAGAAAAGGTATGTCGAGACTTTTATG TTAATTTTACtacctttaaaggttttgtttttgcataagtgttcccgttt catatcagacacatatttcatatcgggacagtgtcttcctattgttatat tattttgatataagaaaaaaattgtttttcttttcctctttctgaccaat cttgctccacatccgtgtcaatccaatgtgaaaaagcttgtaaactAAGa tcgatgagtaagcaaacgatatcactcttatttaaaaacaataccTTTAA AAGGGATAATCAGGCTGCTTGCCTGTAGATTACTTTTAAAACGGTTCTGA AGAAAACCTCCAAATCTTTTTTGGTGTTTTATGTTCTTTTTCCTAATAGG TAGGGtggatattttacgtggatagcccagttatctaggacttttagaca gtctttcgattatTTTGACGGGGTCCATTGCAAGCCGGCTCGGTTATCTA GGAACTGTTTTATGTTCACCAATGTTTTATGTTCACCAATGTTTCTGCAA TTTAGTACTGAGATACGTAACCGTTAAACTCTCCTTTGACCTAGCGTAat taatcatttattttttcagcCGGGGACTTGTGAAAAACTTAAAGCCAACC GTTCCATTAATTTGACAATCTTCGTGTTGCTCTCTGATTTGCCTCGCTCA TAcaaacaagaagtttgaaagaGACTGTTTCTTTTAATTCGATTAGTCTG TAAACTATTAAAAAGGGAAGGTTCAGGGTAATCAAGGGAACGTTTTAATT AATTGGACCAAATTATATGAGCAATTCTCCCTCAAATAGAGCGAAATTAG TTCAAGAAATCTTCACAAATCTTTTTCGGATGAGCGCTTATACTGTATAT TTAaaggaatttgaaattttataaaacgTCCAATGATAGCGGGAAGCTAT TGCGATTTGCTCCGTTGGATGCCATCTTTAGTTTAGTCCTAGCAACGAGG TATGAGGTTAGCAACGcatttgaacatgcgattgctATTAATATACCACG AGTAAGAAAATGAGTTCTTTGCATACTTTAAATTCTCCAACCATTAATTT CGTTTAATTGCAAATGACTTTTCGATGTGGGAGAAATTTCTCACGCTCTT CTATATTGCTCTTacctctttctttttttaataagaacaaactaccttat cggggaaaacttcgtcggggaaaattttcgtcggggaaaaattttcgtca cttgctggtagttggtaaacgcattaagacCGGGGAAAATTtatcgtcac ttggccaaaatttcgtcacttttccccgacgaagttttccccgataaggt atgtaagaacataaggcttcgctggcctaaatattaagaacaagttgaga acattttaaggctttacggactctaaaacatccgattGGCttggaaaatt gtaaaaaaatggctcacaaaatggttaaaataagaacactttattaacat tcttaggtttaaaacccaaaaagctaagaacatctgaaggcttgagaaat tttgggtgttcttaCAAAGACACATCTATTACTTCTACCTCTCGTACATA TCTTTTTAAAGCACTTTATCAATTATATTTTTCCGATTTTATTGCGGGCT TCTTTTCGATGTCAGGAATTTTCATGAATAACATACACTTACTTGTAGCG TGGGAAGACTCCAATTCTCTCATCTCAtaataattttagaatttttgtag TAGagctctaataaaaaaaaccctTGAGTTGATTCTCATTGCATTCAAGA TGGGCTCacaactatataagaacatgatgcttcgatggccaaaatattaa gaacaagttaagaacatccgaatgctTCAATCAAAGATTCTgtatgttct cataaaaaaacgtctaAAGTTAATAGTCTCACCCTCGTAAGAATAATTAT AATCAATCTGAGAAATACAATGTCAGATATTCGAagcattttattcattt tctttgCCAGCATTTGTACAGGCACTTTTATAGAAATGCTATGCTCTGTT TACCTTGAAAACGTCCTAGCAACAAATCCGctctttttaatttcattaaa agaaatgttttggacATTTCGCAATGCCGGTGAAGCTGGTTGGTAAAGCA TTCTTGAAAGAGTTTCTTTGCAGTAAAATTACCAGTTAAATGGTCATatg cgtttatttggaacctaataGTAATTCATCTATTCATTGATTTTGATTAT GACAACTTCATTCATATTATCATCTTCCGGCCCCATCTTAAAGTGAAATT CCTTGTATAATGCTTTCTATAAATCGAATtgttctgtaattcgaacaaat tcgACTCTCTGTTCgacttcgaattagcgagagttgaCTGTAATCAGGGG CCTTATTTACTGTAGGCCTGGCGAACGGGGCCCGGTTCAAGGCACGAAAA AAGCTACAATTCGCTGTTCGAAAAGTTCGGTTCGCCGCCTCAAGTACCta tttacgctaatcaatacactgcgcTTCCTAAGAATTCACCGACTTCTAGA AATcgccagagttaatttttcattcgccagagttaatttttcattcgcca gcctaccaaaacaaagaaaaacccCCTGTGTAATGAATGTCAATTATCAG TCGTTAAAATCTTCCATTATGATAATTATTTCCTTATTCCCCTATTTTGC AGGTTGACCAGGGATTCTGTTCTGCCAAGACGCTTTTCATTTCCGATTCC GACAAACGTAAATCCTTCATCATTTGTACGCGACTTATGTACCCCAACGG AAAATCTCTTGGTGTCTTTGAGTCGAGGAGGATAAAGGTCAGTACTTATT attaatagcgaggttaagcacgggtttattttggCCGTAAAGTGCGACCC GttttttttAACCACAACTTTAGCATCCCATTATTACATCTCTTTTTAAA TTAGCGTGAGAACTATTTGTTTTCAATTGGTTTATTCTTACCACACTACA CTATGGCCTCACCTTGCCTCGGCTCGCCTCGGCTGACCCCATCGTGGGAA TATCTGACAAATAATTTAATCCTTTCCATGAGTGTTTTCTCAAATACTTC CATGATGAAATTAATAAGCATTATAAGAACATCACATAGAATGAGAgctt aatatttttataagaacatgaaaaataatttgttccATTCTCAGGTAATC TCCAAGCCGTCAAAGAAGAAACAGTCCTACAAAAACACGGAACGTAAGTA ACCTTTAAATCACATGTTAGTATTATATATGTTtatccgcagacacgtgt ttcgttCATCCAGGGACTCATTAAATGCGGCTCTGGTAAGCGAGCATAAT CTGCTGTTGTCACCACAGTGCTCCAAACACTAAGTGTTGAGCTTTCCATA ATCGCTTTTAATCGCTCATAATTCAATCTCGCATTTGGAAACTGCCTTGC CTGCTTTCCCATTCTTCCCACCCCGAACTATGGAAATGAAACCCTGAATT GATTTAAATGACGCCCGAAATTATCAGTCTAGTAACGCCCACCTCTGGCG CCCCTTTCAATCTCAAAGTAGTTATCAAACCTCctccaaacaacaaaaaa ttgtcAATGATTTTCCCAAACCGCAACTTCTCTCTGATGGGTGACAAAGA CAGGAAACTCTTAAAAGCGAAAACCACTTATTTTTTGCATCCACTAAATA ATAAAGACGACCGTTAGATGGATGGCCCCTTGTAAAACTTTTCCCACGCT CCTATATTATATCCGTGAGTCAGCCGGCGTTTGATTTGTATCATGTTgca gttttttttgttattgttttaaaaaagtcAGGTTACAGGTTATTTATAGC GATGTCTTTGTGTGTTTGTACAATCATTAGTGATTTTCCCACGATTCTAA ATACTCTTGCATTTTTTCCTCTCCTATCTCTTACTTACAACTTGAGGTCT TTTTAGCCGTCAATCATTTCTTTTGATTCCGAAACTTCcatgaattttct ttaaaaagaatccTCTTGAGTTGCCTTAAAAGTCATCAAAATATATCGAA TTGCTAAGGTTTTGTAAGGGAGCAACCGCTTATTTAGAAAACTAACTGTT ATTTTTCGTCTCTTGAAAAATTGTAATCTTTTCCCGACACAGTCACTTTA CTGTCTAAATCTCTCTAAATTCCCCTGGCCTTTTAACAGTTTGTACAACA TCCAGCACATTGGTGGCATAATTCAACCTGATCCTCTAATTTCTAAAGGC CGGTATCCACGTTCGCGCGAAATTGGcagcagtttttttcttaacctttt ttgcctgaagaaaagattacgtcataaaaaagtttcgcgcgaacaaaaag aaagttgaaggaagttctacttttgttcacccgttacgtcaatttcgacc aatggaattgcttcatttttcaacggaccaatgaccttacagaAACATCa gaaagttttcgctcatgtcgcgcgaaagtggagccCGGCCTTAAACTTAC AATCTTAAAGAACACTTCGTGCTCTTTTTACAATGTATCAGTGTTTAAAG TTTTTCTGTTTCAGGCGGATTTCCGTCTCACCAAAGTTTCAAGAATGTAA AATATTTCCGTCTCAAACGAAAAACTTGCTCTGAGCCactttaaaattat attttctgtCTCCTTATTCAGtgtgtaccttatcggggaaaacttcgtcg gggaaaatttttgtcggggaaaaatattcttcactagctggtagttggta aacgcattaaggccgggggaaaatattcgtcacttcgccaaaatttcgtc acttttccccgacgaagttttccccgataaggtatatcatCCGACACGAC AGTTGCGTTATTCAACCTGAGACTCTGATTTCTAAttctaaaatctctaa aatctCGGTTTTAGCAAGTcatggcaaatttaaactagcgaaaaactgtt taaaatttgccactGCTGTCAAAAACCAgggtagaaaacattacgtaatg aatatcgTAAATATCATTTCCCGCCTCTTTTTTCAGTATGTATATCATCC GGCACGACGGTGGCATTATTCAACCGGTTACGTTCACAAACGGTCAGCAC ACGGTACCTCAACATCGAAGATACAGATGACAATAGAAGCAATTTTCGCG CCTCATCACAACAATGGGGTGCATTCACTATTCATCTATGTAAGTAGAGT AGAATCACTCTATCATCCGTCTAATTTGTCATGGGCCTACTTTTTTGAAG ACCATGCTATTTTAAGCCATAAAAATTATTATTCTCCCGCCCAATTAGAT AATgatttaaggtgttttgagggtgtaaaaagtgaaaaattttcttcgtc gcgacattttttttcaagggGCCCATGTTTGTATATGATATAAGTATACA GTACAATCTCTCTCCATTTTGAGTTTATGAGCCTTCACATCACATCTTTT TAGGTTTACCGTAGTATCTCTCTTACATCTATGTAAGGATACATCAGTTT TCTTAGTTATTCATTATGCCACCCACCAcaataatttatgcaaattatGC CACTGCAAGAGTAATTTATGCAAATTTATTCGTCTTTTCTGTCATATTTA GTGGACGACGAAGAAGAAGAGGGAGAAGAATTTTCAGTGCGCGACGGTTT CATTCATTACGGTCAAACTGTCAAACTAGTCTGTGTCCGCACACAACTCG CTCTCCCTAGACTGGTTAGTATTGTTCTTACTCTTatgttccaaataaac ggccctcccgcttgttaatttttcgaaaattttccgaccaTGATCATGAT TTACAAccaagaccatgttcagacgttatacggttccgttccgttccgaa acgaaatggttccgaaacaagtgtgaacgtcaaaattcgtcaaaaatgaa GACGTTACAAATCAAAACAGATCGGAACGTTTTCGCTCCAcctttttcat cggaacggaactgctccgttccgaaaccaatatgaacacactcgatccgc aACGAAAATCATGTCGgaacgaaacggaacagtaacgtgtgaacatggtc taagagaCACCAGTGCAGTGCAGCGTAGTCTTTTTCTCACTGGTTGTGAA ATTATAACTAATCagaattcaatattttcattttcaggtcATACGTAAAG TTGATAAACAACAAGTATCGATCGATGCAGATGATCCAGTTTCGCAACTC CATAAAGTCGCCTTCTATTTCAAAGATTCAGAAAGAATGTACCTTTGTTT ATCTCAGGAGAAAATTATTCAATTTCAGGTGAGTGACATGCAAGGCCCTG CACGTTTTCTATTacgtttgaaagtttttttctacacGAAAAGTGGacaa gtttttttggaatttgtccTTTGTAGCAGTCCCATTCCCAGAAGTTTAGT AACATAAGTCGATTAAATTTTGcgtgaattaattttcgcggttttcttga atttcttccattttcgcgaaagtaaaaaCTCTGGAAATCAAGTGAGATTG CTGACTCGCGAAATCAAGTCAAACCGAGATTTTCGAAATGACTATTTTAG CCTGAAATACAGTGTAAATCTGCTATCCAAGacgttttcttcaaaatttt ggctgattttcgcgaaataaTATAAATCAAGGCAATTTCGCGATCTTTTT GGCttgtgaaattgaaacaaaaGTAAATTCCATTAATACATTTCAAACTT GCAATCCGCTCTCTTCTTAACAGGCAACGCAATGTCCAAAAGACCCGAAG AAGGAAATGATTACAGACGGAGCTTCCTGGACCATCATCAGTACTGGTGA GTTTTGTATATCTATCTACCGGGTGTTATGCATCTCGTTGATACTGTATT TACGGCTAAGTATCCAAAAGTTcgctcaacaatcaaatgaaaacatttcc tctgaaaatgaaaattcccgAATAATCTCAAGAGACGAACCAAGCTTTTT ATCGTTGCTAACATTATATATTTTGGAATGTTGCTTTCAAAATCTTTACT TTTTTGTCATAGATAAAGCGGAGTATTCATTTTGCGAGGGTGCTGGCCCT GTGTCCGACCCTGTGACGCCGGTGCCCACAGTGAGGGCCATGCAGTTGAA CGGAGGTGGTGACGTTGCCATGATTGAGCTGAAGGGAGAGAATTTCCAAG CCGTCATGAAAGTCTGGTTTGCCGATGTTGAAGCCGACACTTACTATCGG TGAGTTCTTTTAACTTGtctttttatttatgatatgcactagactagagt ctacttctgactgaactttgctttttgataattctgaTTACGCTGAGTCC AGTACAGTAGACTAGCACGtcagtttgaaagaaaaacaaagatgacAGTT CGATTGTCTTTCTGGTTTTATGATGGGCTCTTTTTTATAGTTGTGAAATG AGGAAAAGTTAGGATTAATTAAAGGCCAGTAATAAATCTGCATTTCAAAA ATGGACTTTCAAACTTTACTTCAGTTGTTTAAAACATCTTTCCTCTCTTC TTCTTGTAGATGTTCGGAATGTATCATCGCCGTAGTACCGGACATTCGTT CATTTCCGGAAGGTCGCGAAGACCCGCGTACGAAACTGACGGTACCCGTC TCATTGGTCCGACATGACGGCGTCATTTATCCGACCGGATTGAATTTCGC GTACACTCCGGAACCGTTGGAGCTCATTGAGATGGCGATGCGGAGCCGTG AGATGTATCATCAACCTCGATGA

Coding sequence (CDS) from alignment at sc0000072_pilon:450149..458671+

>XLOC_034691 ID=XLOC_034691|Name=XLOC_034691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2718bp|location=Sequence derived from alignment at sc0000072_pilon:450149..458671+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTAACGTNCGCGTCGCTCAAAAATCGTACGGAAACGAGAAACGATT
CTTTTGTCCGCCACCAAGTTTATATTTGAAAGGTTTGTAACGTNCGCGTC
GCTCAAAAATCGTACGGAAACGAGAAACGATTCTTTTGTCCGCCACCAAG
TTTATATTTGAAAGGTAAAGGCTGGAACAAACGAAGGGATCGCCATGTAG
CGGAGAGCAGCAAAACGAACGAAGCAACCAACAACCCAACGACCTCTTCA
TCATCATCGACCAACAACAATAGCAATAATAATAATGACGTCAATAATTG
TTTATACCCACACGCGCTAGTGTACATCGGCCCTTCCGAACATCCTCTAA
TGCAACAGTTAACCTTCGAAGAAAAGGTAAAGGCTGGAACAAACGAAGGG
ATCGCCATGTAGCGGAGAGCAGCAAAACGAACGAAGCAACCAACAACCCA
ACGACCTCTTCATCATCATCGACCAACAACAATAGCAATAATAATAATGA
CGTCAATAATTGTTTATACCCACACGCGCTAGTGTACATCGGCCCTTCCG
AACATCCTCTAATGCAACAGTTAACCTTCGAAGAAAAGGTTGACCAGGGA
TTCTGTTCTGCCAAGACGCTTTTCATTTCCGATTCCGACAAACGTAAATC
CTTCATCATTTGTACGCGACTTATGTACCCCAACGGAAAATCTCTTGGTG
TCTTTGAGTCGAGGAGGATAAAGGTTGACCAGGGATTCTGTTCTGCCAAG
ACGCTTTTCATTTCCGATTCCGACAAACGTAAATCCTTCATCATTTGTAC
GCGACTTATGTACCCCAACGGAAAATCTCTTGGTGTCTTTGAGTCGAGGA
GGATAAAGGTAATCTCCAAGCCGTCAAAGAAGAAACAGTCCTACAAAAAC
ACGGAACGTAATCTCCAAGCCGTCAAAGAAGAAACAGTCCTACAAAAACA
CGGAACTATGTATATCATCCGGCACGACGGTGGCATTATTCAACCGGTTA
CGTTCACAAACGGTCAGCACACGGTACCTCAACATCGAAGATACAGATGA
CAATAGAAGCAATTTTCGCGCCTCATCACAACAATGGGGTGCATTCACTA
TTCATCTATTATGTATATCATCCGGCACGACGGTGGCATTATTCAACCGG
TTACGTTCACAAACGGTCAGCACACGGTACCTCAACATCGAAGATACAGA
TGACAATAGAAGCAATTTTCGCGCCTCATCACAACAATGGGGTGCATTCA
CTATTCATCTATTGGACGACGAAGAAGAAGAGGGAGAAGAATTTTCAGTG
CGCGACGGTTTCATTCATTACGGTCAAACTGTCAAACTAGTCTGTGTCCG
CACACAACTCGCTCTCCCTAGACTGTGGACGACGAAGAAGAAGAGGGAGA
AGAATTTTCAGTGCGCGACGGTTTCATTCATTACGGTCAAACTGTCAAAC
TAGTCTGTGTCCGCACACAACTCGCTCTCCCTAGACTGgtcATACGTAAA
GTTGATAAACAACAAGTATCGATCGATGCAGATGATCCAGTTTCGCAACT
CCATAAAGTCGCCTTCTATTTCAAAGATTCAGAAAGAATGTACCTTTGTT
TATCTCAGGAGAAAATTATTCAATTTCAGgtcATACGTAAAGTTGATAAA
CAACAAGTATCGATCGATGCAGATGATCCAGTTTCGCAACTCCATAAAGT
CGCCTTCTATTTCAAAGATTCAGAAAGAATGTACCTTTGTTTATCTCAGG
AGAAAATTATTCAATTTCAGGCAACGCAATGTCCAAAAGACCCGAAGAAG
GAAATGATTACAGACGGAGCTTCCTGGACCATCATCAGTACTGGCAACGC
AATGTCCAAAAGACCCGAAGAAGGAAATGATTACAGACGGAGCTTCCTGG
ACCATCATCAGTACTGATAAAGCGGAGTATTCATTTTGCGAGGGTGCTGG
CCCTGTGTCCGACCCTGTGACGCCGGTGCCCACAGTGAGGGCCATGCAGT
TGAACGGAGGTGGTGACGTTGCCATGATTGAGCTGAAGGGAGAGAATTTC
CAAGCCGTCATGAAAGTCTGGTTTGCCGATGTTGAAGCCGACACTTACTA
TCGATAAAGCGGAGTATTCATTTTGCGAGGGTGCTGGCCCTGTGTCCGAC
CCTGTGACGCCGGTGCCCACAGTGAGGGCCATGCAGTTGAACGGAGGTGG
TGACGTTGCCATGATTGAGCTGAAGGGAGAGAATTTCCAAGCCGTCATGA
AAGTCTGGTTTGCCGATGTTGAAGCCGACACTTACTATCGATGTTCGGAA
TGTATCATCGCCGTAGTACCGGACATTCGTTCATTTCCGGAAGGTCGCGA
AGACCCGCGTACGAAACTGACGGTACCCGTCTCATTGGTCCGACATGACG
GCGTCATTTATCCGACCGGATTGAATTTCGCGTACACTCCGGAACCGTTG
GAGCTCATTGAGATGGCGATGCGGAGCCGTGAGATGTATCATCAACCTCG
ATGAATGTTCGGAATGTATCATCGCCGTAGTACCGGACATTCGTTCATTT
CCGGAAGGTCGCGAAGACCCGCGTACGAAACTGACGGTACCCGTCTCATT
GGTCCGACATGACGGCGTCATTTATCCGACCGGATTGAATTTCGCGTACA
CTCCGGAACCGTTGGAGCTCATTGAGATGGCGATGCGGAGCCGTGAGATG
TATCATCAACCTCGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_034691XLOC_034691-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072_pilongenomesc0000072_pilon:450149..458671 +
Properties
Property NameValue
Aaloc1771-1983:8311
Aaloc1585-1767:7815
Aaloc1510-1581:7524
Aaloc1369-1509:6938
Aaloc1258-1368:6404
Aaloc1105-1254:5839
Aaloc1054-1101:3995
Aaloc919-1053:3503
Aaloc751-918:664
Aaloc712-750:622
Aaloc628-708:1