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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:279075..281452+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044379 ID=XLOC_044379|Name=XLOC_044379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2378bp|location=Sequence derived from alignment at sc0000250_pilon:279075..281452+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAGTAAGACTTAAAGGGAAATATTcaagtcatttgattttttgttggGC
AAATATGCGTCTTTTCAACAGGCTTTCGTGCTCAACTAAAAGGTATGCTG
aatttaaaggccggtctccacttgcgcgcgctgcgatcacaactttggct
tcaatcatttttgcttggagaaaagattacgtcataaaaacgtagatatt
tcaacttttttttcaagcgcgaTCGCTACGTCATATCacaccaatggagt
tgcttcatttttcttttgaccaatagcgtggaagcttcgCTCGAAGAAGA
GCGATCGCAGCgcacgcaagtggagaccggccttaaggtgGAGATATATC
AGCTCATCTGGCAAACTTCATTAATATTAGAATCTACTGGGACATCAACc
aaaacataagaaaaatatgtcaaaaagtgCATGCATTACAAACTAACCTT
GAACTCTTGTAATTATCCCTCGATATAGCTATGACGTCAGGACCTAGCTC
CTTACTTCTCTTCTCCTTTATGGTTAGAAACCAGCCTAGGAGCTCGTCCA
ATTTCTTCTCACTGATCGCGCCAGCTTTGGAAATGAATCTGGAATGAACA
AATTATTATATTCATCTCTCATAATAATCAAAACAAGTCAATAAAAATAG
GGCATGAACATTTGATCCAGAAACCCTTTTCTTGTTCCTGAAGTCTTCAA
AGTCACTATCACTATATATAATTGAATTCTACATACGCTTAATAGAAGCA
TTACGAAAACCTAAATTTCTCATTCCAGAATTCGACCAACAATTGATACC
AatgatgattttcgaaaatttggaaaaaagatGGTAGACCTTATTGCGGA
TTACAACGAAAACGTTCCAAACATGTCGGTACTACCGGATGTGAAGTCGG
GATACCTTGTAAAACTATTGCCAGATGAAGCGCCAATGGAACCGGAATCA
TGGGAAAGTGTTTGTGAAGATTTCGAGAAAGCCATTGTTCCCGGTATCAC
GCCTTGGAATTCACCCAATTTCCACGCGTAGGTTGATTTTCGAAGAACTT
TCTTTTGAGAACACTGAAATCGCTGCAtttttttAACTAATATGATAATG
ATTTTGCTTTTCATTGGTCTAATCTGACATCACTGCAAGCACAAATATAA
GAAAATTTCTTCTGTTTCATAATTTAGGTATTACCCAACAGCGAATAGTT
ATGCAGCAGTAATGGGTGGAATGTTATGTGATGCGCTTGGTTGTGTTGGC
TTCACCTGGATCGCCTCTCCAGCTTGCACTGAACTCGAAAGATTAACTAT
GGATTGGCTTGCAAAGATGTTTGGATTACCTGAAGTTTTTCAACACGCGG
GCGAAGGGAATGGCGGTGGCGTCATTCAAGGATCCACAAGCGAATCTACG
CTAATTGCAATTCTAGCAGCAAAACATCGCAAGATGATCGAATATGATCA
TGATGAAGTGTTGGCTTCTAAGCTAGTGGCGTACACATCAAGACAGTCGC
ACTCGTCTGTTGAAAAAGGTGTGCGTTTGGCAGGGACAAAGTTAAGGTTG
GTCGATACTGATGAGAGGTTTAGGATGCGCGGGGATGAATTGAGGAAAGC
GATCGAGGAAGATAAAGCAAAAGGTTTGATCCCTTTCTTTGTCGGCGCGT
CCGTTGGTACAACCAACGTTTGTGCGTTTGACGCACTCGATGAGATAAGT
GCTGTTTCAGGGGAGGAAAAAATGTGGATGCATATAGATGCTGCGTACGC
AGGGGCAGCCATGATTTGTCCCGAGTTTCGATATCTTGTGAAAGGGATCG
AGAATACAGATTCTCTAGTTGTAAGTTGCCATAAGTGGCTGATGGTGAAT
TTTGCTTGTGCCGCCATGTTTGTTCGGGATTCACTGGATTTGATTAATCT
GTTTGATATCAATCCACTGTATTTGAAACatgaatatgaaaatgaaatct
cAGACTTCAGACACTGGCAGATTCCTCTTGGGAGGCGTTTTCGATCTTTG
AAACTTTGGATGGTGCTTAAATCTTATGGAGTAAAAGGACTTCAAGAAAA
TATACGGTGTCAAATTCAacaagcaaaattttttgaagagatGGTTCGCA
AAGATGCTAGATTTGAAGTGATTAATGATGTCTTGATGGGTCTTGTTTGT
TTCAGATTAATTGGTGATAATGCACTGAATGAAGATTTGAATAAGCGAGT
CAACGAGGCACGAAAAATACACATGACACCTGCAACTGTTGATGGACAGT
TTGTTTTACGTTTCGTAGTAGCGTCTCGATTAACCGAGGATAAAGATATC
CAATTCGCCTGGGATGAGATAAAAGACCATGCTGGTATCCTATTGAACAA
TGAAGAGCCAAAGAAAAGAGGAGTTTGA Coding sequence (CDS) from alignment at sc0000250_pilon:279075..281452+ >XLOC_044379 ID=XLOC_044379|Name=XLOC_044379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3084bp|location=Sequence derived from alignment at sc0000250_pilon:279075..281452+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAGTAAGACTTAAAGGGAAATATTcaagtcatttgattttttgttggGC
AAATATGCGTCTTTTCAACAGGCTTTCGTGCTCAACTAAAAGCGAGTAAG
ACTTAAAGGGAAATATTcaagtcatttgattttttgttggGCAAATATGC
GTCTTTTCAACAGGCTTTCGTGCTCAACTAAAAGAATTCGACCAACAATT
GATACCAatgatgattttcgaaaatttggaaaaaagatGGTAGACCTTAT
TGCGGATTACAACGAAAACGTTCCAAACATGTCGGTACTACCGGATGTGA
AGTCGGGATACCTTGTAAAACTATTGCCAGATGAAGCGCCAATGGAACCG
GAATCATGGGAAAGTGTTTGTGAAGATTTCGAGAAAGCCATTGTTCCCGG
TATCACGCCTTGGAATTCACCCAATTTCCACGCAATTCGACCAACAATTG
ATACCAatgatgattttcgaaaatttggaaaaaagatGGTAGACCTTATT
GCGGATTACAACGAAAACGTTCCAAACATGTCGGTACTACCGGATGTGAA
GTCGGGATACCTTGTAAAACTATTGCCAGATGAAGCGCCAATGGAACCGG
AATCATGGGAAAGTGTTTGTGAAGATTTCGAGAAAGCCATTGTTCCCGGT
ATCACGCCTTGGAATTCACCCAATTTCCACGCGTATTACCCAACAGCGAA
TAGTTATGCAGCAGTAATGGGTGGAATGTTATGTGATGCGCTTGGTTGTG
TTGGCTTCACCTGGATCGCCTCTCCAGCTTGCACTGAACTCGAAAGATTA
ACTATGGATTGGCTTGCAAAGATGTTTGGATTACCTGAAGTTTTTCAACA
CGCGGGCGAAGGGAATGGCGGTGGCGTCATTCAAGGATCCACAAGCGAAT
CTACGCTAATTGCAATTCTAGCAGCAAAACATCGCAAGATGATCGAATAT
GATCATGATGAAGTGTTGGCTTCTAAGCTAGTGGCGTACACATCAAGACA
GTCGCACTCGTCTGTTGAAAAAGGTGTGCGTTTGGCAGGGACAAAGTTAA
GGTTGGTCGATACTGATGAGAGGTTTAGGATGCGCGGGGATGAATTGAGG
AAAGCGATCGAGGAAGATAAAGCAAAAGGTTTGATCCCTTTCTTTGTCGG
CGCGTCCGTTGGTACAACCAACGTTTGTGCGTTTGACGCACTCGATGAGA
TAAGTGCTGTTTCAGGGGAGGAAAAAATGTGGATGCATATAGATGCTGCG
TACGCAGGGGCAGCCATGATTTGTCCCGAGTTTCGATATCTTGTGAAAGG
GATCGAGAATACAGATTCTCTAGTTGTAAGTTGCCATAAGTGGCTGATGG
TGAATTTTGCTTGTGCCGCCATGTTTGTTCGGGATTCACTGGATTTGATT
AATCTGTTTGATATCAATCCACTGTATTTGAAACatgaatatgaaaatga
aatctcAGACTTCAGACACTGGCAGATTCCTCTTGGGAGGCGTTTTCGAT
CTTTGAAACTTTGGATGGTGCTTAAATCTTATGGAGTAAAAGGACTTCAA
GAAAATATACGGTGTCAAATTCAacaagcaaaattttttgaagagatGGT
TCGCAAAGATGCTAGATTTGAAGTGATTAATGATGTCTTGATGGGTCTTG
TTTGTTTCAGATTAATTGGTGATAATGCACTGAATGAAGATTTGAATAAG
CGAGTCAACGAGGCACGAAAAATACACATGACACCTGCAACTGTTGATGG
ACAGTTTGTTTTACGTTTCGTAGTAGCGTCTCGATTAACCGAGGATAAAG
ATATCCAATTCGCCTGGGATGAGATAAAAGACCATGCTGGTATCCTATTG
AACAATGAAGAGCCAAAGAAAAGAGGAGTTTGAGTATTACCCAACAGCGA
ATAGTTATGCAGCAGTAATGGGTGGAATGTTATGTGATGCGCTTGGTTGT
GTTGGCTTCACCTGGATCGCCTCTCCAGCTTGCACTGAACTCGAAAGATT
AACTATGGATTGGCTTGCAAAGATGTTTGGATTACCTGAAGTTTTTCAAC
ACGCGGGCGAAGGGAATGGCGGTGGCGTCATTCAAGGATCCACAAGCGAA
TCTACGCTAATTGCAATTCTAGCAGCAAAACATCGCAAGATGATCGAATA
TGATCATGATGAAGTGTTGGCTTCTAAGCTAGTGGCGTACACATCAAGAC
AGTCGCACTCGTCTGTTGAAAAAGGTGTGCGTTTGGCAGGGACAAAGTTA
AGGTTGGTCGATACTGATGAGAGGTTTAGGATGCGCGGGGATGAATTGAG
GAAAGCGATCGAGGAAGATAAAGCAAAAGGTTTGATCCCTTTCTTTGTCG
GCGCGTCCGTTGGTACAACCAACGTTTGTGCGTTTGACGCACTCGATGAG
ATAAGTGCTGTTTCAGGGGAGGAAAAAATGTGGATGCATATAGATGCTGC
GTACGCAGGGGCAGCCATGATTTGTCCCGAGTTTCGATATCTTGTGAAAG
GGATCGAGAATACAGATTCTCTAGTTGTAAGTTGCCATAAGTGGCTGATG
GTGAATTTTGCTTGTGCCGCCATGTTTGTTCGGGATTCACTGGATTTGAT
TAATCTGTTTGATATCAATCCACTGTATTTGAAACatgaatatgaaaatg
aaatctcAGACTTCAGACACTGGCAGATTCCTCTTGGGAGGCGTTTTCGA
TCTTTGAAACTTTGGATGGTGCTTAAATCTTATGGAGTAAAAGGACTTCA
AGAAAATATACGGTGTCAAATTCAacaagcaaaattttttgaagagatGG
TTCGCAAAGATGCTAGATTTGAAGTGATTAATGATGTCTTGATGGGTCTT
GTTTGTTTCAGATTAATTGGTGATAATGCACTGAATGAAGATTTGAATAA
GCGAGTCAACGAGGCACGAAAAATACACATGACACCTGCAACTGTTGATG
GACAGTTTGTTTTACGTTTCGTAGTAGCGTCTCGATTAACCGAGGATAAA
GATATCCAATTCGCCTGGGATGAGATAAAAGACCATGCTGGTATCCTATT
GAACAATGAAGAGCCAAAGAAAAGAGGAGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:279075..281452 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 343-1542:1179 |
| Aaloc | 94-339:780 |
| Aaloc | 1-90:1 |
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