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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:523324..528613- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009671 ID=XLOC_009671|Name=XLOC_009671|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5290bp|location=Sequence derived from alignment at sc0000247_pilon:523324..528613- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCACCACAGAAACCACTCAGAAGCCTACTGCTGCCTCATCTCAAAA
TCCAAAAGATGCTATTGAAAGAGTTGTTATCCACCCATTGGTGTTGCTTA
GTGTTGTCGATCATTTTAACAGAATGTCAAAAGTTGGTAACCAGCGCCGT
GTAGCTGGTATTCTTTTGGGGTCAATACGTAATAAAGTTTTGGATGTGGC
AAATAGTTTTGCTAGTAAGTATAGTCTTTATAGGATTTCTTTTTCATTCA
ATTTCAATCACTTTCAGAAAGTTTTTGGGCCACCAACAAAATTCTCAATA
CATATTTCACATAGCCTCAGCCCCCGCTGGGGGGTTGGACTTAAAAATCA
GGGGACCTAATTTTTGCCTGGGACCTAAACCCAGACTGACGCTATGTATC
GTTGAACATAACACATCAGTCAGACGTTTGGTGTAAATACCATTTATTAA
ATGTTATAGATTAGTTGAAGATGTTGAAATTCACTAACATATTTTTTCTT
TTTCTTAGTACCATTTGATGAAGATGATAGAGATCCATCTGTATGGTATC
TTGATCATGACTATTTGGATAACATGGCTGCTATGTTCAAAAAAGTTAAT
GGTGAGAACATAATGTTTTTTTCAACTGGATCAAATCCAAACTTGATTTA
TCCAAAAAAATTCAACTGCTAGAAGATCGTGTTCAAAAAAGAATGACATT
TTTGGTGTTTTTTGTTGATAAATTTCAAACAGCTATGATTTGTGATAAAT
TGTGGCTTTCAAAAAAAGAAAAAAATCCCAAAAGAGGAATTCACTAAACT
TTTTGTTCCGAAAAGAACGAAGTCTGTAGTGTAATTGAGCGGTGTTTAAA
AAGCGTTTGAACTGTGTGAAAAAATGCGGCTAATTTTCACTGCGGCTAAC
CATGCAAAGCCCACTTGAAAGCCCTATAACTTCTTTACGGATGAAGGAAG
CAAGTCAAGATTTTGGGAATACCCTGGTAAAGGACTGAAGAAACCATATC
TGTGAAGAAATGTGGCTCAAGTCATTAAATTTGTGAGTATTTGTGGTTTA
TTTTTGAAAAACAATATCCTTTGACAAAAAGCACGTTTTACTTAAAGGAT
AATGTGAAATTAAGCGGGAATTATTGGAAAATAGTCATTTCAGATATAGA
ACTATGATATTTGATCAAAATTTAACCCAAAATGTGAAATTTTGTGGCTT
TAAAGACATTGTCTTTGGTAAGTAAATATTAGCTTATTGAGTATTACATT
AAGTTCAAAAAATTAAATTTATCAACCATCAGAGCAGTTGAAAATTTATT
TTTTGTATGGATTTAGTGAAGTTCAGTGGCTACTCAAATTTTATGCGATA
CATCTTCTCACATCTCTTGAAAGAAAGTGATAAAATGTGGTTTTCTATGA
TAAACAGGTGTTTTTAACAAAAACCACTATCTTTCCCAGAATCCTGCCAG
AGCTAAAAGTTAATTTTTGCACATATAAGATCTAACATTTTTTTACATAC
TAAATCAACTGTATTTATGGTGTTAAAAGTGATTATATGTGGCTAATTTA
ACATATTTTTACAAGCTACATTTCTTTAAAATTGGAAACATTATTATCCT
GACTTTACTTTTAGAAACCTTGGTTTGTCAAGGGATTGTGAGAAAGTAAA
TTCTTATCATATTTTGTGAATTTAGGTGGCTACTTTAACGTGACTGCAAA
TATATTCTCTCTACCTATAAACCTTAGGTGGTTTTTCATCAAAAAATGAT
GTTTTTCAATAAAAACCACAATTTCTCCCAGAATCTTACCAGCTTAAAGG
TTCAATTAAAACCAAATAAGAATTACATAACATTTTTGCAGCAATGCACA
CAATTTATTTTAATAAAAGTGATTAAGTGTGGCTAAAATTGAATATTCTT
ACAAGCAGGTTTGAAGGCATCTATTAGTCTAGAATTGGAAACATTACTAT
GCTGACTGTACTTTTAGAAACTTTTGTTTTATGTTTGTAAAAGGATTTGC
GGAAGTAAATTCTTAATCCATTTTGTGAATTTAAGTGGCTACTTTGATTC
ACATATAATTACTTATTCATAGGAGAGTATATTCTCATTAACATAATTCT
GTAATATTACCATTCAGTTTGACAATTTAATTTTCTCAGCAAAAAGTATT
GAGTAGAATTGTTGAATTTTCAGAATTTTCAGCTTTAGCCACACTTTTTC
ACTTTATTTTTATTCTACTGATATGATTTTTTAAAATCATTTTAAAAAGA
CAATTTCTATTCCTAATCATTTCTGATAATTTTTTTGTTTTTATTTCAGG
ATGTTGCTGTTTAATCATTGAGGTCTTTGGCAAAAATTTAGCCACATTTT
TTCCCTCAAAATGACTATCAAGACTTTTCAATTGAGTTTGTTTAATTGTG
GAAGGTTTAAAAATACTTTATATGACAAATTTCTCATTTTTGAACTTGTT
TTAATAGTAAATCATAGCGTCATCTTATTTATGTTATATTTTTAGCGATT
TTTTACTAATTTTGGATAATTTTAGATAATAGAGAGTTCGAGTACTTTAG
CCACATTTTAACCCATATTCTACACAACAACTGTGTTATAATATATCAAC
AGATAGCTTTTGTTCCATTCTTCTCAGTTCTTGAGAATTTTGTTTCTCAA
ATTAAATGTGCACAAGTGTGGCTAATAATTTGACAGGTCTGAAAAGAAGG
GTCGTATATGAAGCCGCATAAAATCCCAAAACAACTACTAGCTTGCTATG
GAATTACAATGATGTGTTTTGTACAGCTTCTTAGTATCCCTCTACTAAGT
TTATGTTATTGTGATTGATATGTGAAGTGATGTGGCTTAGTTCAAAAAAG
TAGGGTAATTTACCCTTAAAGTGGATTTTAACCACAATTTTTCACGTTTT
TTGTTTCAATTCGAGTTTATTGATATCTTACTTCGTAACCTTTCAAGAAA
CATATTTTACATAATATTTTCACAACTATTTTAGTTTTTATCAGTTAAGA
TAGTTTTGTAACTGTTTTTAAGTTTACTTCAAAGACACCACAATATTTCA
CACTTTTGGTCAGAAATTGTTTCACATAATTATACTAGGCAATACTATGG
GGTATCTTCAGCTTAAATTCATAGATCTTTTGGTGATAGTCGCTTTTGTG
TAAGAATGAGGCTAACTTTCCATAAACATACAAAAGAGTCATTTTTAGCC
CCAATAATTCACATTTTGGAAAAGTTTTGGTTCAGTCAGCTTAGTGAAAG
GGTAAAGAATCCTCTCCTAAAACTTTACAAGATCAAACCCATTTTTCGTT
AATGTATGCCAATTTTCTCAAAACTAAGGTTTTTTGTGAATTTTCATTTT
GTCATTCTTTTTTGAACACGATCAGAAATTTTATTTACAATTGCCATAAT
ACCTTACCATATTGATACTTGCGATATTTTAAAATAATAACACCCAATAA
TACATAGATAAAAAGAAAGGTTAAGAATATGGTTTAGCCTTTTAAGTACA
CATTTTATTTATATTATATTTATCTTATCGATTCATTTAGCTAAAGAACG
TGTCATCGGTTGGTACCATACTGGACCTAAACTTCACCCCAACGATATTC
GTATCAATGAGCTTGTCAGGAGATTCAATCCAAATTCAGTAAGGTTTACT
ATTAAAAAAAGAAACAATTTTAAACTACCCTTTTGCGAATTTGAGGTCTC
AGTTACAAACTAATAGCTTGTTTTTTAAAATGGTTGACCTTCTTCATTAA
GTGGGGGTTATGGAAAAAGAGGTAAAGCTCTAGTTTAGACGGCCGACTTT
CTGCCCTGCCTATTCAAATTGTCAGTAAGCAGAGAATGGGTACAAAGTTG
GCAGTTAAAATTTTGCTTGGATAAGATTGAAGGAAGTCATTGCATTGACA
TCAAAAGAGGGCAATACATTGACTTTAGACAGCCCACTTTATGCCTACTT
TTAAATTCAAAATTAGAATAACAAATTTTATGATTATATTATATGGAAGT
GATTACTGTGTTTATAATGATTCTTAAAAAATTGAGGTACTCGCTTGTAT
TTTCAATCATTTTTGTTAACGTTTAGGTTCTGGTCATCATCGATGCTAAA
CCCAAAGAACTAGGACTTCCAACTGAAGCATACATTGCTATTGAAGAAGT
GCACGATGTAAGTGGATCCTTTCTTTCGTTTTCGTGTTCTTTTTCTCGTA
ATCTAAGTGCCTCTTTCTACATTAGATGAACAGTTGTTCTCTGTTATTAA
TTAATATTATAACTTCACTATAAATTCCATTATTCATTAACCTTCCACAA
TTTGAGATGGAGCTTCTTCTATTGGTGCTCTCAAATGGTGTATATGTCAT
GGCACCTCTAGTTCCCTTCTCTGCGTATACAGTCCACCATCAGTGTAATC
GGACCAAACTTCGATTAAATATTAGCCCTGTTTTGTATGATCTCGAAAAT
ATAACAATGTCAGGATTTAGGAAATTATTGCTAGACGATAACGACCTGCC
ATAACCACCAGCAGTAGTACTGACTATTAGTTATCTTCTTTTCTTCACAA
CAGGACGGTACGCCAACATCGAAAACGTTCGAACACATTCCGAGTGAAAT
TGGTGCCGAAGAAGCTGAAGAAGTCGGTGTCGAACATCTCCTCAGGTAAC
GATACTATTAATTCAACTTTTTAAAACTCAATTTTATACGTCATATTTTC
TTGGCTTGGTATCGAGCACTATGGTGGCTTTGGTTTTTCTAGGGTTTACT
GTAAGGGTTACTGTAGTAGGACAAGTGAAAAACTTGAGATGCTCGAAATT
ATCTTCTTTTTTTCTTCTTTTTTTCCTCAGGGACATTCGAAACGTTACAG
TGGGTACCCTCTCACAGCGTATCACTAACCAAGTGTCGTCGCTTAAAGGA
CTACACGCTCACTTGCAAGACATTCATACGTACTTAGAGCAAGTCATCAG
CGGTAAACTACCTGTCAATCATACCATCATGTACCATCTGCAAGATATTT
TCAATCTGTTACCCAACCTCAACGTTGAAGAATTCATCAAATCAATTACG
GTGATGACCAACGATCAAATGGTAGTTATTTATTTAGCATCCGTCGTACG
TACAGTCATTGCACTCCACAATCTCATTAATAACAAACTACAAAATAAGG
ACTTAGAACGGGAAAAAGAAGAAGGCAAGAAAGATAAAGATGCAACAAAG
GCTGATAAGGATGAGAAAAAAGATAAAAAGGACTCCTCGAAAGATGACAA
ATCTACAACGGATAAGAAAGAATCGACCACCAAGAAATAA Coding sequence (CDS) from alignment at sc0000247_pilon:523324..528613- >XLOC_009671 ID=XLOC_009671|Name=XLOC_009671|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2076bp|location=Sequence derived from alignment at sc0000247_pilon:523324..528613- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCACCACAGAAACCACTCAGAAGCCTACTGCTGCCTCATCTCAAAA
TCCAAAAGATGCTATTGAAAGAGTTGTTATCCACCCATTGGTGTTGCTTA
GTGTTGTCGATCATTTTAACAGAATGTCAAAAGTTGGTAACCAGCGCCGT
GTAGCTGGTATTCTTTTGGGGTCAATACGTAATAAAGTTTTGGATGTGGC
AAATAGTTTTGCTAATGACCACCACAGAAACCACTCAGAAGCCTACTGCT
GCCTCATCTCAAAATCCAAAAGATGCTATTGAAAGAGTTGTTATCCACCC
ATTGGTGTTGCTTAGTGTTGTCGATCATTTTAACAGAATGTCAAAAGTTG
GTAACCAGCGCCGTGTAGCTGGTATTCTTTTGGGGTCAATACGTAATAAA
GTTTTGGATGTGGCAAATAGTTTTGCTATACCATTTGATGAAGATGATAG
AGATCCATCTGTATGGTATCTTGATCATGACTATTTGGATAACATGGCTG
CTATGTTCAAAAAAGTTAATGTACCATTTGATGAAGATGATAGAGATCCA
TCTGTATGGTATCTTGATCATGACTATTTGGATAACATGGCTGCTATGTT
CAAAAAAGTTAATGCTAAAGAACGTGTCATCGGTTGGTACCATACTGGAC
CTAAACTTCACCCCAACGATATTCGTATCAATGAGCTTGTCAGGAGATTC
AATCCAAATTCACTAAAGAACGTGTCATCGGTTGGTACCATACTGGACCT
AAACTTCACCCCAACGATATTCGTATCAATGAGCTTGTCAGGAGATTCAA
TCCAAATTCAGTTCTGGTCATCATCGATGCTAAACCCAAAGAACTAGGAC
TTCCAACTGAAGCATACATTGCTATTGAAGAAGTGCACGATGTTCTGGTC
ATCATCGATGCTAAACCCAAAGAACTAGGACTTCCAACTGAAGCATACAT
TGCTATTGAAGAAGTGCACGATGACGGTACGCCAACATCGAAAACGTTCG
AACACATTCCGAGTGAAATTGGTGCCGAAGAAGCTGAAGAAGTCGGTGTC
GAACATCTCCTCAGGACGGTACGCCAACATCGAAAACGTTCGAACACATT
CCGAGTGAAATTGGTGCCGAAGAAGCTGAAGAAGTCGGTGTCGAACATCT
CCTCAGGGACATTCGAAACGTTACAGTGGGTACCCTCTCACAGCGTATCA
CTAACCAAGTGTCGTCGCTTAAAGGACTACACGCTCACTTGCAAGACATT
CATACGTACTTAGAGCAAGTCATCAGCGGTAAACTACCTGTCAATCATAC
CATCATGTACCATCTGCAAGATATTTTCAATCTGTTACCCAACCTCAACG
TTGAAGAATTCATCAAATCAATTACGGTGATGACCAACGATCAAATGGTA
GTTATTTATTTAGCATCCGTCGTACGTACAGTCATTGCACTCCACAATCT
CATTAATAACAAACTACAAAATAAGGACTTAGAACGGGAAAAAGAAGAAG
GCAAGAAAGATAAAGATGCAACAAAGGCTGATAAGGATGAGAAAAAAGAT
AAAAAGGACTCCTCGAAAGATGACAAATCTACAACGGATAAGAAAGAATC
GACCACCAAGAAATAAGGACATTCGAAACGTTACAGTGGGTACCCTCTCA
CAGCGTATCACTAACCAAGTGTCGTCGCTTAAAGGACTACACGCTCACTT
GCAAGACATTCATACGTACTTAGAGCAAGTCATCAGCGGTAAACTACCTG
TCAATCATACCATCATGTACCATCTGCAAGATATTTTCAATCTGTTACCC
AACCTCAACGTTGAAGAATTCATCAAATCAATTACGGTGATGACCAACGA
TCAAATGGTAGTTATTTATTTAGCATCCGTCGTACGTACAGTCATTGCAC
TCCACAATCTCATTAATAACAAACTACAAAATAAGGACTTAGAACGGGAA
AAAGAAGAAGGCAAGAAAGATAAAGATGCAACAAAGGCTGATAAGGATGA
GAAAAAAGATAAAAAGGACTCCTCGAAAGATGACAAATCTACAACGGATA
AGAAAGAATCGACCACCAAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:523324..528613 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 580-1038:460 |
| Aaloc | 487-576:738 |
| Aaloc | 406-486:1215 |
| Aaloc | 310-405:1749 |
| Aaloc | 217-306:4781 |
| Aaloc | 1-213:5291 |
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