XLOC_012280 (mRNA) -

Overview
NameXLOC_012280
Unique NameXLOC_012280
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000394_pilon:117483..118422+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012280 ID=XLOC_012280|Name=XLOC_012280|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=940bp|location=Sequence derived from alignment at sc0000394_pilon:117483..118422+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagatgttAAAAGCTTTATTGTTGATCTCTTTTGTCGTATATGCTGT ACATTGTAAGtaaattattatatattatatatattttcagtgaaaatttt tatcaaaactgaATTCCTTAACTAGACAATAATCCTGGGGggaggtacta gggttggcaaGTTAGGGgcatgtgcggacgggacctccaaaaaaacgacc ctttgagagagtgatttttgctgaaaaggtgacgcTTAGAATTTTCTTAG ACTTTTGCAAAAAGagagagacttttttaattcttaaaaatcgtgaattt tccgaccttTGGAGAGACTACTGAAAGGtaaaaaacccgacccttaccgt ctgcacatacccagcacctatttttgcgtAAGTGCCCCCCTCCCGGGACA ATAATAGCATATTGACAAATTTTGAGGAATAATGGAAAACGTTTAGCTGG AGTAATTTTTACAGGGCTTTTACATACTAGGAAAGTAAAGAAACTGGTGG CTGGGATTACCAAGTTACCAAGAATAAGATCAATAAAATTATGGATAATT ACAAAAGGATACCCTGAGCACCATCATCTTAGAGGGTTTCTCTAATATTA GAATGCGCACGCtgctaaaaagattttaatataGAAAACCTTTTTTGTTT TAGGCACTCCAAAccacgaagaagaagaaaaggaactgagtgaaattgaa gaaattcttcaaaaggaATTGACACAAAATGATGATGAAGATTTGAGGGA TCCAAAACCAATATTTTCTTTCGTGAAAAGCCTTTTTAGTCGAAGAAGAA GTAGTTCACATGATGAAAGATATGCAGCAAATGTCAACGACCCGAAAACT TTCAAACCATTCCGATGGATCAAAAGCAAACTGACCAGAAGACGTGGTAC TGTCATTGTTCACCGACGAACTGGATCAAGAACCCGCTAA

Coding sequence (CDS) from alignment at sc0000394_pilon:117483..118422+

>XLOC_012280 ID=XLOC_012280|Name=XLOC_012280|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000394_pilon:117483..118422+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagatgttAAAAGCTTTATTGTTGATCTCTTTTGTCGTATATGCTGT
ACATTatgaagatgttAAAAGCTTTATTGTTGATCTCTTTTGTCGTATAT
GCTGTACATTGCACTCCAAAccacgaagaagaagaaaaggaactgagtga
aattgaagaaattcttcaaaaggaATTGACACAAAATGATGATGAAGATT
TGAGGGATCCAAAACCAATATTTTCTTTCGTGAAAAGCCTTTTTAGTCGA
AGAAGAAGTAGTTCACATGATGAAAGATATGCAGCAAATGTCAACGACCC
GAAAACTTTCAAACCATTCCGATGGATCAAAAGCAAACTGACCAGAAGAC
GTGGTACTGTCATTGTTCACCGACGAACTGGATCAAGAACCCGCTAAGCA
CTCCAAAccacgaagaagaagaaaaggaactgagtgaaattgaagaaatt
cttcaaaaggaATTGACACAAAATGATGATGAAGATTTGAGGGATCCAAA
ACCAATATTTTCTTTCGTGAAAAGCCTTTTTAGTCGAAGAAGAAGTAGTT
CACATGATGAAAGATATGCAGCAAATGTCAACGACCCGAAAACTTTCAAA
CCATTCCGATGGATCAAAAGCAAACTGACCAGAAGACGTGGTACTGTCAT
TGTTCACCGACGAACTGGATCAAGAACCCGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_012280XLOC_012280-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000394_pilongenomesc0000394_pilon:117483..118422 +
Properties
Property NameValue
Aaloc58-342:656
Aaloc1-54:1