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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000366_pilon:123651..128954+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014263 ID=XLOC_014263|Name=XLOC_014263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5304bp|location=Sequence derived from alignment at sc0000366_pilon:123651..128954+ (Clytia hemisphaerica_ch_hm2_pilon)
atGCAAAATCAACATGCAGAGCCTTGGAATGCAGGTTTCGATCAAGCCAG
TCAGAACAGTCATACACTTCGACAACAAGGATTGCCACCGCAAACTGATG
CATCAAGGTTACCAAGTCAGAACCGAGAGGAGTTTGAGAGATTCCAACGA
TCAAAAGATCGAACGTTTTTATGTATGTTAATACTGGTGATTGTCTTCTT
ATTGGGTTCCATTGTATGTGGTGGTGTGGCGGTTGCCATGGTTCCCTGGT
GGAAACACTCTAGAGGTGAGTAAACGGTGTTTTTGCCTAGCTGCCACACC
atattgtttcaacgttcatcttaACGTTGTTTGGACGTTAGATGGACATT
AAACCACAGGTGTGCAAGCTGGGTGACTTTTCAGATCACAGTAGAGCGAC
ATAAAACGGTTCTAATGGTGAGAAAGCTTAACTAAGAATAAGAttttttt
GCCTACATTTAGTGCATTGCAGAAGCTTTTCAGTTTGTGACTACTACAGT
CGAGTTGTAAAAACAAGGTTTGGTTAGATTCAGATGGATTCAATTATGAA
ATACCATAAACTGAGAATTAAGTGATAAACGTTACAAAATTCTCCATACA
AGGGACTGTTATAAactcactttcactttcaataTCATGTTGTAATGTAA
AAAtatgacacccccttctcacagacccggtggggattgatattcccata
ccttttgtggctggggatttcaattcttttgttttcaagtcagaaaattc
agtggggatgggaaaaatagcatagtgTTTCGCAGTGAAATTGGTTTGTT
GGATTATTTTCAGAAGGGACAAATATTGGAGGGTAATTCTCCACCGGGat
gattttttggccaatttttccagtgggaaggggtcccagttgatctgtga
gaaggggtgtaataTGCCATTTTGTTTAACTTTCTAGAAGCACCAGAAGT
TTCAGAATGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAACCGGAGC
CTGACGAAGATTGGGAATGTAATAAATATACAAATTCAGATACTTTGCAA
TCACCAGATTCGTTAGGTAAGAAGAGGTCAAGTCAGGTCACTCATCTCGC
AAATGTAATTATACTGGTTTAAGTGCAAAAGCTCGATTGAGTCTAATGGG
GTTCTACAGATTTCAGAATTATTTGATAAGGCAGATGAAAGCAAATTGAT
ACTTTCTTTGAACAAGGTTATCCTCTCACGCTCATCCTCTTTATaccaaa
taaaactttttactgTACTTCATTTCTAAATATGAAGCATAGAGGCCTGC
AAATTAGACTACATAATGCTTGACTCCTATCATCAAACTGTaaccaaaca
atcaattaaTTTTGATGTGATGCTATATTCGCCAATACATATCGCTGGAA
TAgattaagaccatgttcacacgttactgttccgtttcacactggtatga
ttttcgttacggatcgagtgtgttggttattggtttcggaacgtttcgaa
GCAAGAAAATGGAGCAGTTCCGTTcgccgatgaaaaaagtggagcgaaac
cgtttcgatctgttttgcgtcttcttttttaacgtttcgaattttgGCGT
TCACACTTGTTTCGGAACCGTTTCGTTTTGGAACGGAACGGAACCATAAC
GTCTGAACATGGTCTAATTCCTCATTTACAAATCTAATCCTTAGGCATGG
ACATTTTGATATCACTATCGCTAGCTGGTATTGGCGTGGCATTTCTCGCA
TTGATTTTAACTATTGTGGCATCAATATTCAAGAAATCAAGATATATACG
AGAATTGCTTTTCTCGATTTGTGTACTTTGTTTAATTGGAGGTAAGTGGT
AAATGCATACACGTTTTCTTATAAAAATAAGGGGCGTACGGGGTTTGCGA
TTTCCGAAATACCGAATGATTTTGCTAAAATTTCCGAGAATCCGCAAAAA
AAACTTGCAATTCCGATACCGATTTTTTTAGGGTATTTTTCCTCGTTTTG
ACTAATTTTTCATCAAATTTGTTTTTTCATGTATGAATAGACGATATCGG
CTTAACAAAATTCTCCCCGAATGATTACCCATGATGCATTGCAcaaaaaa
attcagtaagtcaatatagtccgtgaatttttttgcgcaatgcatcatgg
gtaatcattcggggagaattcgttaagccgatatcgtctattccgaaaaa
gggggataaaagctttataataccgaaattccgaagcaaaaattcatgga
tttctgataccgaaacaatttcagcattccgaaataccaaaggaattttt
cccgattttcaaatctccgaagaaaaaagggtcaatttccgcaattccga
aataccgtacgcccccacaCATATAAGAGCATTAGGCTTCGATAAGCAAA
ATATTGTATTTTACAGATGTAGATctatgtacaaaatttcataGATGATT
ATTATCACACAGAAAATCTTATTTCATTTCAGCTGGTTTACTTGGCTCGG
TCATCGGTTTGGTTCTAGACAAAGACAAAGCCGAAAACTTGATCCCTCGT
GGAATCCAAATCAAAAGCACCGTCACAGGAATAGCAACTCTTAAACACGC
CCTTATGTTCTTCATCATGTGTGGGGCGGGAGGGGCGGTTTTTATGGCGC
TCGTATTTACAggtgaataatttttttttttagcagAAACAGGGGGTATG
AAGCCATAATATGTAGGTGAAATGTATAACAAACAGGTTCTTTTGGTTGT
TGTTTATTCTCTCTATCAAGTCTTAAATTTGTAATGTTTTTGGAGCATTT
TTGGGATTATGTTTAAAGCTTGGTTCCCACTGGGCAATACGAAGCGATTG
AAAGCGATAACCTTTCAAAAGGAAGGGTTAAAGGCTAATGCTCAATATAA
AAAGCCATTTGAGAAAGTATTAGTAAAATCTCCATGATGGTTTTTACTTC
ATGATTATAGCTGTGATTTTATTCATCCATGATGATGTCGATTTGAACGA
TATGAAATATGACAATGATGAAGATTTAAATCTGGAGATGGATGAAGACG
GCTTCCCTGTCAAAGAGAAAAGACAAGAAAATGACCAGCCAGGGTAAGCG
CCTTCATTACTCAGTTTCAACCTTCAAAATGTAAAGTAAGTAaatttgcg
accgcagtcgaggtcGACCCGAaagctcccttttcgtatagctgtctacc
cgaaggtaggggagggcgccacttcCCTGGATTTCAGCACTTagccttga
tccgtctctttagttgctgatcatcaagcagagaggcatcaagtaccatt
ttgggaatctttggtatgacccagctggggatcgaacccacaaccttgcg
caccgtagctggatgctctaccttcatgctacggtcgctacGGTCGCCCA
TCAAAATGTATTGTAAACTGTACAATTTTGGCTTAAACACTCCCCCTTCT
CACACGCCCACTGGCAACCCTGCCCACCGGAAAAATATCGTCCTCGGTGG
AAGattttactctaatttttgttctcactgaaaataatcaaataaaccaa
tcctcactgaaaaatattatgctgattttcccatccccactgaattttct
tgctcaaaaacaatggaattcaaatccccagtcatgagcaaaatgagaat
atcaatccccattgagttttggtccactgtttttgctgaaaaaatgtcac
caggtctgtgagaaggtggTGTATAAACTACAAAATTGCTTCCGAAAATA
TTGTTCAGTATCTTTTACAAATCGTCCCAGACGAAACACAAGTTattttg
ttgtggaaaattgCTAAATCGATCTAATCGGCCAGGGTGTTATACACTGT
GCTAAAAAGTCTAAATATTATGCTTTGCTTATACTTAAATATCCTGACTT
AAAGTCAACAGTTGGACAAAGTCTTTGAATTTAGAAGTACTGGAATACGC
TGGGATGGGTCATtctttttatatccatacagggaaTAGACGAATATATC
CACGGAGTAACCATAGAAAAGTTTCCAGGGGGGTCTAAAAGAGTACTTTT
ATCGTTCTTCaaggggggtaaaaagttattttaaaatttccagggggtaa
aacaCTGACTAATTCGTCCAACCTCACTTTAagttatgaaaataaatttc
tcaaGGGATTTGATTGATAAGGTTTGTTCACCCCCTGTATAGAagtttaa
tggaacagcccaattacTGACTGTTTCTTAACAGCAATCCCGGGCTACTA
AATAGATTAAGAACAAATAACACAGAGAGTAATTTGTTTTAGCCCATCAT
CGAGATATCTTGACGTGCCAGACATCGGCATGAGAGGGGATGGAAGGCAC
CATGACGGAGGGGGCGGAAGACACCACAGCGGAGGAGGCGGAAGGCACCA
CAATGGCGAAAGGCGTCAAAAAAGAACAAGCCAAGGTTCATATGACGCGC
AGTATTCCAATCCATCGTTTCACCCACAATataatgtaagtataaaaaaa
TCGTGTCCTGAAATAAACTTTTAAGAACAACATTTTATGATGAACAAACG
ACGTTACtaattaccgtattacttcgaataaacgccccttctttaaacgc
cccctcgaataaacgcccctcctaaaaggaaaattatttaacaaacgccc
cctcaaataaacaccTCCTTTCGAAAGAACGCCCCCTCtaggggaggggc
gtttattagaaacttgtgacttaAATACCTTGATACAAGTTTTGATTAGg
attgaaaaggaagattttagtttttttttgtaaccACAGATCAGTTTTAA
TGCAATTTTAGTCGCTGACCCAAAGAAATTTGCACTGAAATCCTGGTATA
GAACTAAAACAAAGACTAGATTTGCTTTAAAAGTATTCAACGTTAGATTC
AAATAATTTAGAAGTAATACGGTAACTCAATATGTGAAAAACTGGACCAA
AATGCAAACTTATTCTACCCCTCTTTAATCAGTCCAAAATGTGAATTATT
GATCGCACTCTTTCAAGCTTAAATACAGTAGTGCTTCAGGAATACCTTAT
CGATAATTTCTTCATCTTAGATGGGATATGACCACCATTATCAACATCCA
CGCCATCCACACCGCCCTCCCTCTCACGCCTCACATGGACGCCCATCTTC
TTATTACTCTGATAGTTCACGTAATGGACATCGCCCAACGAAACCACCCA
GGGCAAATCGATCACGTGATCCTAGAATGGGCGGTGGGCGGCCAGGAAGT
GGCGATTTCAGAAGTTATGAAGACTATGAAATGTATTTCAATACGCCCTA
TTAA Coding sequence (CDS) from alignment at sc0000366_pilon:123651..128954+ >XLOC_014263 ID=XLOC_014263|Name=XLOC_014263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2562bp|location=Sequence derived from alignment at sc0000366_pilon:123651..128954+ (Clytia hemisphaerica_ch_hm2_pilon)
atGCAAAATCAACATGCAGAGCCTTGGAATGCAGGTTTCGATCAAGCCAG
TCAGAACAGTCATACACTTCGACAACAAGGATTGCCACCGCAAACTGATG
CATCAAGGTTACCAAGTCAGAACCGAGAGGAGTTTGAGAGATTCCAACGA
TCAAAAGATCGAACGTTTTTATGTATGTTAATACTGGTGATTGTCTTCTT
ATTGGGTTCCATTGTATGTGGTGGTGTGGCGGTTGCCATGGTTCCCTGGT
GGAAACACTCTAGAGatGCAAAATCAACATGCAGAGCCTTGGAATGCAGG
TTTCGATCAAGCCAGTCAGAACAGTCATACACTTCGACAACAAGGATTGC
CACCGCAAACTGATGCATCAAGGTTACCAAGTCAGAACCGAGAGGAGTTT
GAGAGATTCCAACGATCAAAAGATCGAACGTTTTTATGTATGTTAATACT
GGTGATTGTCTTCTTATTGGGTTCCATTGTATGTGGTGGTGTGGCGGTTG
CCATGGTTCCCTGGTGGAAACACTCTAGAGAAGCACCAGAAGTTTCAGAA
TGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAACCGGAGCCTGACGA
AGATTGGGAATGTAATAAATATACAAATTCAGATACTTTGCAATCACCAG
ATTCGTTAGAAGCACCAGAAGTTTCAGAATGGATACACATCGGGTTTTGG
GAAGCGTGCTTCAAACCGGAGCCTGACGAAGATTGGGAATGTAATAAATA
TACAAATTCAGATACTTTGCAATCACCAGATTCGTTAGGCATGGACATTT
TGATATCACTATCGCTAGCTGGTATTGGCGTGGCATTTCTCGCATTGATT
TTAACTATTGTGGCATCAATATTCAAGAAATCAAGATATATACGAGAATT
GCTTTTCTCGATTTGTGTACTTTGTTTAATTGGAGGCATGGACATTTTGA
TATCACTATCGCTAGCTGGTATTGGCGTGGCATTTCTCGCATTGATTTTA
ACTATTGTGGCATCAATATTCAAGAAATCAAGATATATACGAGAATTGCT
TTTCTCGATTTGTGTACTTTGTTTAATTGGAGCTGGTTTACTTGGCTCGG
TCATCGGTTTGGTTCTAGACAAAGACAAAGCCGAAAACTTGATCCCTCGT
GGAATCCAAATCAAAAGCACCGTCACAGGAATAGCAACTCTTAAACACGC
CCTTATGTTCTTCATCATGTGTGGGGCGGGAGGGGCGGTTTTTATGGCGC
TCGTATTTACAgCTGGTTTACTTGGCTCGGTCATCGGTTTGGTTCTAGAC
AAAGACAAAGCCGAAAACTTGATCCCTCGTGGAATCCAAATCAAAAGCAC
CGTCACAGGAATAGCAACTCTTAAACACGCCCTTATGTTCTTCATCATGT
GTGGGGCGGGAGGGGCGGTTTTTATGGCGCTCGTATTTACAgCTGTGATT
TTATTCATCCATGATGATGTCGATTTGAACGATATGAAATATGACAATGA
TGAAGATTTAAATCTGGAGATGGATGAAGACGGCTTCCCTGTCAAAGAGA
AAAGACAAGAAAATGACCAGCCAGGCTGTGATTTTATTCATCCATGATGA
TGTCGATTTGAACGATATGAAATATGACAATGATGAAGATTTAAATCTGG
AGATGGATGAAGACGGCTTCCCTGTCAAAGAGAAAAGACAAGAAAATGAC
CAGCCAGGCCCATCATCGAGATATCTTGACGTGCCAGACATCGGCATGAG
AGGGGATGGAAGGCACCATGACGGAGGGGGCGGAAGACACCACAGCGGAG
GAGGCGGAAGGCACCACAATGGCGAAAGGCGTCAAAAAAGAACAAGCCAA
GGTTCATATGACGCGCAGTATTCCAATCCATCGTTTCACCCACAATataa
tCCCATCATCGAGATATCTTGACGTGCCAGACATCGGCATGAGAGGGGAT
GGAAGGCACCATGACGGAGGGGGCGGAAGACACCACAGCGGAGGAGGCGG
AAGGCACCACAATGGCGAAAGGCGTCAAAAAAGAACAAGCCAAGGTTCAT
ATGACGCGCAGTATTCCAATCCATCGTTTCACCCACAATataatATGGGA
TATGACCACCATTATCAACATCCACGCCATCCACACCGCCCTCCCTCTCA
CGCCTCACATGGACGCCCATCTTCTTATTACTCTGATAGTTCACGTAATG
GACATCGCCCAACGAAACCACCCAGGGCAAATCGATCACGTGATCCTAGA
ATGGGCGGTGGGCGGCCAGGAAGTGGCGATTTCAGAAGTTATGAAGACTA
TGAAATGTATTTCAATACGCCCTATTAAATGGGATATGACCACCATTATC
AACATCCACGCCATCCACACCGCCCTCCCTCTCACGCCTCACATGGACGC
CCATCTTCTTATTACTCTGATAGTTCACGTAATGGACATCGCCCAACGAA
ACCACCCAGGGCAAATCGATCACGTGATCCTAGAATGGGCGGTGGGCGGC
CAGGAAGTGGCGATTTCAGAAGTTATGAAGACTATGAAATGTATTTCAAT
ACGCCCTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000366_pilon | genome | sc0000366_pilon:123651..128954 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1048-1281:5071 |
| Aaloc | 856-1047:4294 |
| Aaloc | 724-852:2963 |
| Aaloc | 544-720:2485 |
| Aaloc | 397-540:1697 |
| Aaloc | 268-393:940 |
| Aaloc | 1-264:1 |
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