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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:589606..595241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018282 ID=XLOC_018282|Name=XLOC_018282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5636bp|location=Sequence derived from alignment at sc0000210_pilon:589606..595241- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGTATGGATTAAACTTCTACTTCTCGCTAGCCTTCTTCTTGTTAA
AGTCTACACAAAGATAACTAGACTTCCACAATGCGACAAATTCAGTGCCA
CTTTCAAAGTTCAGAAATTGAGACTGATAGATTCAAGTAGTGTGAATCAT
TTGGAAAAAATCAAAGATGTGGAGAATAAAGAAAGATGTTCAACTCTATG
CGTTGGGAATTCGGAATGCGTATCTGCTATTTATCAAAACTATGATAATG
GAAAAAAATGTGTTTTGTATGACCACAAGATAGAAACCTCAAAGATGAAG
AAATCTGACAAAGTGTTTTATATGACAACTGATGATGAACAAGAAGTAAG
CCTTATGGTAAGTGTCAAGTTCTTCTCACCATTGCGAATCGATAGATCGA
TAGTTACGTGGATAACCTATTAAAACGTTTATTTTTACATAAGTGTTCCC
GTTTCATATCAGGACAATGTCTGCCTATTGTTATATTATGTTGATATAAG
CAAAAAAATGTTTTTCATTCCGCTTTTTGACCAATCTTGCTCCACATCCG
TGTCAATTCAACATAAAAAAGCTTGATCAAAATTGATGAGTAAGCAAACG
ATATATCTCTTATTTAAAAACAAAACCTTTAATCTAAGACTGTCGGAGAT
GTTTCATCATAGAGTCATAACAAGTTACAATACACCGTTTAGGAGTCTCG
CTATCTCCACCGTGTTTCACTGTAAAAACGGTAGGTAAAAATGCGCACTT
TAGTACTGTGGAAGGTTAGAATGTAAACATCGTCAATTCTTTAGATATTT
GAACATGATATCAATGATAATTTTATGGATCTCTCCTGAAAATTTCACAA
AAATTCGTCAAGAGGTAAAGAAGTTATGATTAAAAGGAGTTTTACCTACC
ATTTCTCTTCTAGGTTTCCTTACGAGAACCGAAATTTTACCTACCGTTTT
TTACGGGAAAGAGCGGTCGCTAAAATCAAAACAATGGAAAATTGTTTGGA
CGCGTGCGCAGTCGACACTACTAGACGGTGTATTGACTCTCGCTATTAAT
AAGCGAGAGCCTACTGTGTATGTTGATAACCGTTTAATTGTTTACAGGTA
GCCTTTCACACCCCTGTCTCTTTTTCAAAACCAAGGGGAAATTCTTTCCC
ACAATGCCGAGGACGGGAATTTTTAACGATCTTACGAAAGAAAAGTGATG
CCTTAAAATTTACGCTTTTTTCGTTTCTTTCATGGCACATTTTAAAATCC
AGGTGATAAACTTTATATTCAGCGAATCATAGTATGAAAGCCAAGCTGTT
CGCGCAATTTATGTCGGAAATAACGCAGAAGATTGGCTTCTATCCTTACT
TTCTTTCAGCACGGCCACGCATGCTCAGAAGGGAGATGTCACAAAGAGAG
AACAGAAAGATGCGAAGAAAATTGTCAAACACAAGATGGATACAAATGTT
TTTGCAAACAAGATGGTGTTTTGAAAGACAAATACTGCAAGCCTCTACCG
GGTGAGAAAGATATACAGTTGACGCTCTCTGATTCGAAAGGGAGCGTCAT
TTATGAGTTTTTTGGTTGACAGGGACTTTCCCGGAGAATTTCATCGAATA
AGGGAGCCTATCGAATAGTAGAACGTCGAATTAGAGAGCGTTAACTGTAT
GACCTTTGCTAGCCACCCAACCTTCGTTCGGTGTAAAAAATGGCCAAAAG
ATCGACAGAGAGTTATTAGTTTCATTTTTTGCTTGAAATTGGGAAAAAGT
ATCAATGCAATAGCGTCAAAAGGAGGCATATCGCATTGACATTTCAGACA
GTCAAATTTCTGCTAGCCCGGGGGCAACTTATAGCTCTTTGATAGACTTG
ATGGCGCTGATACATTGACTTCCAAGCCAGAAGGGCTAGACTAGGATGAG
AAATGAAGGCAATTATTTCCCACCCAGCTGGTACACAACGTGTTGTTTGA
ACGTTCATCTAACGTTAAATGGACGTTAGATAAACGTTAAAACAACGTTG
TGTACCAGCTGGGCATCCAAAACGCTTGACCCACGTGGTTTTCATACAAA
CGCTAGATTGGAAGTAATCTTTACTGCCAGATTTTGAAAATATGCAACGT
GAAAACAAAGAAAGTGTTAGATTTTGAATCCGTCATCCTAAATGCGGCGC
GAACTGGGACTTCAGAAAAGACTTCACTTTTTCTTGATGGAGAAAGGTCG
AAGATTCTTCTCTAGCCCCTTCGGCTCGGGACTTTAAACTCAATGATCGC
ATTGACATTAGACAGTCAACTTTCTACTAGCCCAGGGGCCACTCATCGCT
TTTTGATAGACTTGATGACGCTGATACATTGCCAACTGCTGCCAAATATG
TAAAAAGGAAAAGCAGAAAAGCGACTGCATGTAGTGTAAAGGGCTACTTT
ACTTAGACTACACAATATATTGGTGAGCAATAGTCGAAAATATAGTTTTG
GGACCGTAATTAATGTACGGAGTAAACAACAGGTGCTCTATTATAAAAAG
GATTTTCATTTTGTAAACAATCAGGGGGATTGTTGGAATATTGCAAATCT
AGCTGACAATATATTGCGGACACCTCTTCAATATATTTCTGGCATTCAGC
AATATATTATCAATATATTGCCTAAAAATATATTGTGTAGTGTATATACA
ATATTGGTCTCTTGTTGTCATCTAAACATTATATAATTATTTCAGTTGAT
GGAGCATGGAGACAATGGGGAAGTTGGAGTTCTTGCAGTCAGTCTTGTGG
AGGAGGACAGGAAACAAGAAGGAGATCATGTGATCCTCCGGCGTTCGGTG
GAAATGATTGTATCAGTGCGAATACCGAACAGGAGCGGCCGTGCAACCAA
GATCCTTGTCCAGGTGAATAAACTCTGGTTTAGACGGCCGACTTTCTACT
CTGCCTATTCTAATATTGTAAATTATTAGTCGGCAGAATGTCTAAAGTCT
AAACTTAATATATTTATTTCCTCTTTCTGATAAGAATTTTGTGAAAGGCA
CTTCATTTTCAATATTTTTGTTGTGAGATTATTACACCCCCTTCTCACAG
ACCCGGTGGGATTTCTCCAACCAATGGGGGTAAAATAATGAACCAGAACT
CAATGAGGATTGATATTCCAATGTTTTTTTCATGACCGGGAATTTATATT
CTTTTGTTTTCGAGTCATAAAATTCAGTGGGGATGGGAATATTATTAGTT
ACACGGTCTTCTCGAGGTGGGATACGGGATATACAGGGTCAGTAAAACCG
TATTGGTGGCGAGGCTTTATCCCGTTGAAGTCCCTTTATCTTTAATTAAA
AGTCGTGCTGTATCCATACAAACTCAAGAAAAGTAAAAATCAAAATAACT
TTGAAGATTTTCTGTTTGTTGACTTTCTCAACCCCAACCATTTCAATTTC
GATTGGAGTGTGATTATTTACGTGGGTCCCGTGCCCTCGTGGGTCCCGTG
GGTCCCGTGCCCTCGTGGGTTCGTGCCCCCGTGGGTCCAAAAAAAAAACC
CGTGGGTCCAAAGAAAAAACCCGTGGGTCCGAAAAAAAAACCCGTGGGTC
CAAAAAAAAAAAACCCGTGGGTCCAAAAAAAAAAACCCGTGGGTCCGAAA
AAAAACCCGTGGGTCCAAAAAAAAAACCCGTGGGTCCGAAAAAAAAAAAA
AAAACAACCCGTGGGTTCCGAAAAAAAAACCCGTGGGTCCAAAAAAAAAT
CCCGTGGGTCCAAAAAAGAAATCCCGTGGGTCCAAAAAAAAAACCCGAAA
AAAAAATACAACTTCGTGGATTTCATTGGTTGGTTTGGTTCCGGAAAAAT
AAATGTCTCGAAACATTCTATTGTTTGCTTGTGTGTTTTAAACTGTGGGT
CGGTTTTAGATATTTGCGAGATTATGTATCTGGAATTCTCTACAGCTACG
GCTAAAGCGGCGAGTAAGGCAAGTAATGGCGGGTGAAAGCAAGTTCGATA
TTTGACGTACGGCATTATGTCGACTTTGCTTATAGTACGGGTGTTTCGGT
GTTTTTCCCGTACAGAGCAAAGTAGACGACGACATGTCGCCTTTGGTGAT
GACCCGCATGGGCAGCCGTAGAATATCTCCGATACATAATCTCGCTATTG
TCTGCGGGAGACTGAGTGTTCGAAAGTCTTTTTCTCGAGTTCAAGGTAGG
ACAAAACAGTCGAATATCAACTCTTTCAATACCGCCAGAAAGAGAAAGTT
TCCGGATTCTAGCAATTGACAAATGAGAAAGTTTGTTGCAGGGCGAATTC
TCACTGTTGAAGAGACTTGCTTAATTTTTGCTTTAATCGAAAGTAAACTT
CATTAACTTTGAAGAGACCCCTAATCAGACCCAAATCAGGCGATCACGCC
AAATTTCAAGTTCAATCACTCATCACGAAAAATGACCAAATCGAAGTTCA
TCACGCAATTATCGGCAATACATACAGAGCAAAATTTCGTTTAATCACGC
ATCACGCTCCAAAATTTTGCCAAATCGTGATCACGTTCTAACTTCCAATC
AGGCAATCAAGCCAAAAAAATTCGGAATCGCGCCATCACGCTTGAAAAAA
CCCCCCGGCACGCCATCACGCAAATCGCTGGGGAGGCCTCTCTTTGAAGA
AAATTCAGTTTCAAAGCGAGTGGATGTTTCTATCAGAGGCTATAAGGTGA
AGAAGACGTCGTTCCAAAAGGAACGATTTTTTGGGATTTTTTTTGGACCC
ACGGGTTTTTTTTTTGGACCCACGGGTTTTTTTTTGGACCCACGGGTTTA
TTTTTCGGACCCACGGGTTTTTTTTTCGGACCCACGGGTTTTTTCTTTGG
ACCCACGGGTTTTTTTTTTTGGACCCACGGGTTTTTTTTTTGGACCCACG
GGTTTTTTTTTTGGACCCACGGGGGCACGAACCCACGAGGGCACGGGACC
CACGGGACCCACGAGGGCACGGGACCCACGTAAATAATCACACTCTTTCG
ATTGCAATTATTTTCAAAACAAGACATTCGAATTTTGATCAAAACATTCG
AAAGCACATTCGTCAATATGCAATGTCTTCTTTTTTTTCTCAATCGAACG
TGAGGGAGACAGATACGGTAGATATCCCACCTCCACGTGATGTCTTTTAA
CCAATGAAATCGTTAGAATCTTACTGATGCGGGATAAAGCATAATATTTT
GCAGTGAGGATTGGTTTATTTGATTATTTTCAGCGGGAATTAAAATTAGA
GGAAAATTTTCCACTGGGGACAGCTGGAGACGATATTTAAGCCAATTGCT
TTCCCAGTGGGTCTGTGAGAAGGGGGTGTATTATCCCTCGACACACTAAG
AAGCATACGGTGGAATGGAATGATGTGAATTTTTTTCTTTTAGACCCAAT
GTACGTTCGTTGCCAAAATACTTGTAAAACGGCAGCTTGTGCAACCGAAA
TGGAACCGCGAGTAGGTTGCAACAAGCAATTCTCGTGCGTTCAGGCTTGC
AAAATACGACAACTTGGAAAGACTGAACAAGAATGTAAAGCCCTTTGTAT
AAAACCATCCAATCCAGATTGTCCACGAACAGTGAATGGGTATACGTTTA
GTTTGTGCGCGTCTTGTCCAGGACTCTCATGCGCTACTTATCCACCGCTT
GAAGAATGTGAAATTGGCTGTCAAAGTTATATCTGA Coding sequence (CDS) from alignment at sc0000210_pilon:589606..595241- >XLOC_018282 ID=XLOC_018282|Name=XLOC_018282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000210_pilon:589606..595241- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGTATGGATTAAACTTCTACTTCTCGCTAGCCTTCTTCTTGTTAA
AGTCTACACAAAGATAACTAGACTTCCACAATGCGACAAATTCAGTGCCA
CTTTCAAAGTTCAGAAATTGAGACTGATAGATTCAAGTAGTGTGAATCAT
TTGGAAAAAATCAAAGATGTGGAGAATAAAGAAAGATGTTCAACTCTATG
CGTTGGGAATTCGGAATGCGTATCTGCTATTTATCAAAACTATGATAATG
GAAAAAAATGTGTTTTGTATGACCACAAGATAGAAACCTCAAAGATGAAG
AAATCTGACAAAGTGTTTTATATGACAACTGATGATGAACAAGAAGTAAG
CCTTATGATGGTAGTATGGATTAAACTTCTACTTCTCGCTAGCCTTCTTC
TTGTTAAAGTCTACACAAAGATAACTAGACTTCCACAATGCGACAAATTC
AGTGCCACTTTCAAAGTTCAGAAATTGAGACTGATAGATTCAAGTAGTGT
GAATCATTTGGAAAAAATCAAAGATGTGGAGAATAAAGAAAGATGTTCAA
CTCTATGCGTTGGGAATTCGGAATGCGTATCTGCTATTTATCAAAACTAT
GATAATGGAAAAAAATGTGTTTTGTATGACCACAAGATAGAAACCTCAAA
GATGAAGAAATCTGACAAAGTGTTTTATATGACAACTGATGATGAACAAG
AAGTAAGCCTTATGCACGGCCACGCATGCTCAGAAGGGAGATGTCACAAA
GAGAGAACAGAAAGATGCGAAGAAAATTGTCAAACACAAGATGGATACAA
ATGTTTTTGCAAACAAGATGGTGTTTTGAAAGACAAATACTGCAAGCCTC
TACCGGCACGGCCACGCATGCTCAGAAGGGAGATGTCACAAAGAGAGAAC
AGAAAGATGCGAAGAAAATTGTCAAACACAAGATGGATACAAATGTTTTT
GCAAACAAGATGGTGTTTTGAAAGACAAATACTGCAAGCCTCTACCGGTT
GATGGAGCATGGAGACAATGGGGAAGTTGGAGTTCTTGCAGTCAGTCTTG
TGGAGGAGGACAGGAAACAAGAAGGAGATCATGTGATCCTCCGGCGTTCG
GTGGAAATGATTGTATCAGTGCGAATACCGAACAGGAGCGGCCGTGCAAC
CAAGATCCTTGTCCAGTTGATGGAGCATGGAGACAATGGGGAAGTTGGAG
TTCTTGCAGTCAGTCTTGTGGAGGAGGACAGGAAACAAGAAGGAGATCAT
GTGATCCTCCGGCGTTCGGTGGAAATGATTGTATCAGTGCGAATACCGAA
CAGGAGCGGCCGTGCAACCAAGATCCTTGTCCAGACCCAATGTACGTTCG
TTGCCAAAATACTTGTAAAACGGCAGCTTGTGCAACCGAAATGGAACCGC
GAGTAGGTTGCAACAAGCAATTCTCGTGCGTTCAGGCTTGCAAAATACGA
CAACTTGGAAAGACTGAACAAGAATGTAAAGCCCTTTGTATAAAACCATC
CAATCCAGATTGTCCACGAACAGTGAATGGGTATACGTTTAGTTTGTGCG
CGTCTTGTCCAGGACTCTCATGCGCTACTTATCCACCGCTTGAAGAATGT
GAAATTGGCTGTCAAAGTTATATCTGAACCCAATGTACGTTCGTTGCCAA
AATACTTGTAAAACGGCAGCTTGTGCAACCGAAATGGAACCGCGAGTAGG
TTGCAACAAGCAATTCTCGTGCGTTCAGGCTTGCAAAATACGACAACTTG
GAAAGACTGAACAAGAATGTAAAGCCCTTTGTATAAAACCATCCAATCCA
GATTGTCCACGAACAGTGAATGGGTATACGTTTAGTTTGTGCGCGTCTTG
TCCAGGACTCTCATGCGCTACTTATCCACCGCTTGAAGAATGTGAAATTG
GCTGTCAAAGTTATATCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:589606..595241 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-963:292 |
| Aaloc | 625-669:2820 |
| Aaloc | 595-624:2853 |
| Aaloc | 502-588:2940 |
| Aaloc | 358-498:4278 |
| Aaloc | 1-357:5637 |
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