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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:1036167..1039625- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033522 ID=XLOC_033522|Name=XLOC_033522|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3459bp|location=Sequence derived from alignment at sc0000093_pilon:1036167..1039625- (Clytia hemisphaerica_ch_hm2_pilon)
AATGAATTCATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAGG
CAAGAACAAGACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGCC
AAGATTCTAACCAATTTCTTGTCATTCAACAAGGCATGCATTGGTAATCC
TTTACTTTACTTTACTTTTGCATAGTTGGGTTCATTCCTCTCAAAGAAAA
TGGATAGTCTTAGTAAAGACTGATTGGAGCATGCAAGAGCATGATTTTTA
AGCATCTTTTCAAATATAAATCCAAGTTTGATTGACTCAGGAGGCTGATA
AGCTACTGTAGCAATGTGACTGTTCCTAATATGAAATGTGTCTTGACTGA
AAATGACTTGAAAATGTTTTGACTAATGTCCCTATTCTAACTTTAAGGAA
GGCGTATTATAAAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTAT
ACAGGCTCACAGATTATCAAATAGGTAAATAATTCTTTCTTATAATAAAA
ATATTCCCGGTAAACTGGTCTGAATTTTCAATATTTGGACTCGTTTCAAA
CAAAGTTGTTGTAGTGAAGTCGAAAAAAATGAAAAACTGCCAGCGAATAC
CGATTTGATTAACTAATGTTTTGAAATTCAAACTTTTACTTTAAGGGACG
AAACTTTTCTGGTTTTTTTTGCGAATTTTAGGCAAATTCTACTTTTGGTC
ATGAAATTTTCTTTAAATCCACCAAATAACAATTTGAGGGCGTATTTGTG
TTTCATAAATTAGAAAAAAAATCTGGTTTTTGATTCAAAAAAACGAATGA
AAATCTAATTAAATAGAGGTAAAAGGCAAAAGTTTTTTAAAAAGCTAGAT
TCACAAAAGTTTTTCTCACTAAATGCAAAATTTTTGCAATTTTGTTGATT
CGCTAAAATTTCTTCCCTTAAAGTATTTTATTTGCTAATCAGTGAGTCTT
TTTATTTAACCTTTTCAGATATGGTGGTGTATACCAAATCTGATGTTGCA
TTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAATTCTGATTCCCTTTT
GAAAAGGTAAAGAATTTCTGTGTGTCTATCTTCCAAAATTTGGGGTGTTT
TTTTTTGCAAAGAGTGCCTGGGGGATCCTAACCTTAAAATTTTTTAAAAG
ATTCTAAAGCCTAACAATATTCATAATTATCTTTCCAACAAGGTATTACT
TTTTACTATATCTTTTCTCCTTCCTTTATCTTCTCCATGAGCAATGAATG
AAAAAGTACAGGACTGCCATTTTTCAGGAACAAACTTTAACATTTCAACA
CACTGTGTTAAAAATCGAACCTCTTATGTTGGAAATGAAGCCTGTATGCA
ATATAATTCTTAGTGTCACAAATTGCTTAACTTTGTAGAATGGAAGAACG
TAAGAAAGGAAATCTTCAGAATCTAGTGATCGAAATTGAAAGTGACAATG
ATGAAGGTAAGGAAGATTTTTTTTCAGAATTTCTAAAGCATGTTTCAACA
CGCCCTACCAGAGACTTCTTTATTATAAAAGACAAGTAGCTTTGCATTGA
AGTAACTTCTTTTTAATGAAAACAAAAATATCGCACTGCAATAGCTTCTT
TTTAGACAAAGGAAAAAAAGTTGTTTTCAAATGTTTGCACAAACAAAAAG
AGTCTACCTAGAACATGCCATTATAGAGAACTATGGTTTACTGACGATTA
CCTCGGAATTTTATGTTCTGTCGTGCAATTAACGATTAATCACTCGTAAC
AAAAGGAGAAAATACCATAATTACCATTTTCTCCTTTGTTACTCGTGATT
AATCGTTAATTGCACGACAGAACATACAATTACTAGTACAAATGCGCTGA
AGTTATAAATTTGGCAGTAATAAGGCAATCACAAATTTATTTATCACTCT
TATTAAGACAAAGAGTGTCATAGCTTTCAAGTGTGCTTGGAGAGTTAGTA
GATAAGTTTCAGCCAATGTTGTCTTGACCGTAATCAAAATAATTATTACC
TTTTAGATTTCATCGAGAAAAACTTGTCGACACTTTACGGACAAGAGCCA
CTCAAACAGAGACTCAAGAAATTGGCGAGACGAGTGGTTTTTAACAAGAA
AAAAGGCGAGACGGTTAAAAACGAACAACTTCATATGTTATTCACTGGTA
ATCCTGGCACTGGGAAGACATCTGCTGCCAGGCTGATGGGCGGTAAGAAT
TGTATTTACGTCAATCCCATTGACTTTTGCGAACCTTTCGCATATCTTTT
AAAATAGAGTAAATCCATGCACCTTACATGGGATCATCCCCCCCCCCAGG
AAGGAAGGTGGTGGGAATCAGATTTTGGTACTAGGGGGGAAGTGAAAATT
ACAAGCTTCATGGGGGAGAAATACAAATGGGGGGTATATTCAGTCCTCTG
CCTGGTGGGGGGGGGGACAAAAACAAAAATACAGTAATTTTCATAATTTT
CATAAAAACAATGCCCACCATCAAACACGGAACGTTCACTGAAAATCCGA
TTTAAGTTTTGCATGGATCATTCTATTTTCGCGAGTCAGCAAATTGCTGC
TACACGTTTTTTTTATAAGAACATCGAAAATTTTGGAAGCCCTCCGATGA
TCTAAACTTTTTGAGTTTTAAGTGAGTATTTTTGTGCAATCTCCTAAGAA
ATCGGGTGTTTTAGAGTCCACTAAGCCTTAAAAATGTTCTTAACATGTTC
TTAGTATTTTGGCCATCGAAGCCTTATGTTCTTATATACTTTGTTCTTAT
AAAAAACGTGTACCTTAATATCTCAAAAATGGCAAATATTTGAGAAAAAG
CAAAATTTTTATCCCATTTAATAATCATTGATAGTTTTAGCCTTTTTTGT
GCACCTTTCATGCTCGTCCACGTATTCTAGGCGAATGTGACTAACGTAGG
GTGCTTGGTTATTTGATGTAAAGGCTTTGGACTAAATAATTTGAAAAAGT
TTGACATTTTCCACCTAAATGATGGGACACTCGGTTGCCTATTAAAGGGG
GAACCTAATTGCCATTGTTGGGGGGTTTAAAACGTGCGGTAAATGTAGAC
TAAGATCAGGCTATTTGGAGCAAAATAAGAGATTCTGCTTTTAACAACTG
AAAATACTTTCAAAAGGGGGGGGGGCTAGGGTCCCTACCCTGGGAATAGC
TACTAGGTTCACAAAAAGTATAAGGATTTGGTTGCCAACTGAGTGTGTCC
GTAAAAAGTGGATTTATCACAATTTTTTTTTTTTTCCATTGTACTGTAGA
GAGGAATTAAAGTTGAAAATCTTAAAACCTTACTCGACTGAATCAAGCCT
TTACCATCCGTATCAATCAATATGATAATCTTATTCCATTTCAGGAATTT
TCAAAGGGCTCAATGTCATTGCCAGAAACCTCGTGGTCGAGGTTCAACGG
TCGGACTTGGTGGCAGAGCACATTGGTGGGACGGCGATAAAAACGATGGC
AGCCATTGA Coding sequence (CDS) from alignment at sc0000093_pilon:1036167..1039625- >XLOC_033522 ID=XLOC_033522|Name=XLOC_033522|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000093_pilon:1036167..1039625- (Clytia hemisphaerica_ch_hm2_pilon)
AATGAATTCATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAGG
CAAGAACAAGACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGCC
AAGATTCTAACCAATTTCTTGTCATTCAACAAGGCATGCATTGAATGAAT
TCATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAGGCAAGAAC
AAGACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGCCAAGATTC
TAACCAATTTCTTGTCATTCAACAAGGCATGCATTGGAAGGCGTATTATA
AAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTATACAGGCTCACA
GATTATCAAATAGGAAGGCGTATTATAAAGGAAGATGTTACCATTTGAGC
TCATTAACCAAGTTATACAGGCTCACAGATTATCAAATAGATATGGTGGT
GTATACCAAATCTGATGTTGCATTTGGTGTGAATATTGGCACAGAGGTTT
TTCCAAATTCTGATTCCCTTTTGAAAAGATATGGTGGTGTATACCAAATC
TGATGTTGCATTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAATTCTG
ATTCCCTTTTGAAAAGAATGGAAGAACGTAAGAAAGGAAATCTTCAGAAT
CTAGTGATCGAAATTGAAAGTGACAATGATGAAGAATGGAAGAACGTAAG
AAAGGAAATCTTCAGAATCTAGTGATCGAAATTGAAAGTGACAATGATGA
AGATTTCATCGAGAAAAACTTGTCGACACTTTACGGACAAGAGCCACTCA
AACAGAGACTCAAGAAATTGGCGAGACGAGTGGTTTTTAACAAGAAAAAA
GGCGAGACGGTTAAAAACGAACAACTTCATATGTTATTCACTGGTAATCC
TGGCACTGGGAAGACATCTGCTGCCAGGCTGATGGGCGATTTCATCGAGA
AAAACTTGTCGACACTTTACGGACAAGAGCCACTCAAACAGAGACTCAAG
AAATTGGCGAGACGAGTGGTTTTTAACAAGAAAAAAGGCGAGACGGTTAA
AAACGAACAACTTCATATGTTATTCACTGGTAATCCTGGCACTGGGAAGA
CATCTGCTGCCAGGCTGATGGGCGGGAATTTTCAAAGGGCTCAATGTCAT
TGCCAGAAACCTCGTGGTCGAGGTTCAACGGTCGGACTTGGTGGCAGAGC
ACATTGGTGGGACGGCGATAAAAACGATGGCAGCCATTGAGGAATTTTCA
AAGGGCTCAATGTCATTGCCAGAAACCTCGTGGTCGAGGTTCAACGGTCG
GACTTGGTGGCAGAGCACATTGGTGGGACGGCGATAAAAACGATGGCAGC
CATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:1036167..1039625 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-678:115 |
| Aaloc | 379-561:1452 |
| Aaloc | 310-375:2071 |
| Aaloc | 223-306:2490 |
| Aaloc | 145-219:3062 |
| Aaloc | 1-141:3460 |
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