|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:982265..983464+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037478 ID=XLOC_037478|Name=XLOC_037478|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1200bp|location=Sequence derived from alignment at sc0000080_pilon:982265..983464+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATATCAATTTATTACCAGATGAGATACTAGAAATAATCATTGCGTT
CTCGGAAAAGGAAGATGCAAAAGCTTTATCACGAACATCAAAAAGAATGT
ATAATCTTACTATAGAACGAATTTGGTCAAAACCAAGATTTTATGGGAAA
CGAAATCATTCCTTCTTGACAAAAATAACGAAATTTCCGATTAAAGAATT
GCATACAAATGAGTTTAATTGTCTTTGGTCTAATATTTGTGATATCATTT
CTGGGCTTGACTTATTACATATAGATAATGACGACGATGATGAAACTTTT
GAAGACAGATTAGACGATATTTGTGAAATTGCAAAACCACCAATTGTTCT
GCACACAAATGCCCTTAATATGAAATACAGAGACGActttaatttgtttt
tgaacGAAATTCTCGGCGGTGCTTGTTCGATACGAAAATTGATAATCAAT
CACAAGTTTAATAGCGACGAAAGAAGAAACTGTGCTTGGTCACCTAAACA
ACTTGAAATGGTCagtgaaaaagttttcattgaGGAAATTTTGTCGAGTT
CTTTATCGATCACTGATTTTGATGAGCTTGTTAAAGTTTTGTGTAAACTT
AAAGGAACACGTGTCAATATTTCTGAAACGTTCAATAACCAATATATTTT
AACTGTTGAAGATTTGGATAAACTTGCATCGAATAACATAAAAGTTTTCA
AGATTGATTGTGTTGCCCTTGAATATGGTTTGTCGAGTGATGGCCTTACA
AAGTTTGCTCCtgtactttcaaaatttcaatctttGGAAGAGTTTAGCAT
TCGTCATGCTTACTGCCAAGATCCAATACCTATTCAGTTATTTATTGGTT
TACCGCTAATTACGCTTTCTACAACACAGATTCGTTGGGAAGCTGGTAAG
ATTGCTGAGATTGTTAAATTATTATCTGAAATCAAAACCCTGACCCATTT
AGACTTAATAAAAAGTAATCATTCAGATTATAAACTTTCCCTTGCggatt
ttgaacttttcaaaattttaccagTAGTAATGTTTTTGGAGTTGGAAGCT
TTAGATTTGACAAAGAAAAACGTTCCAGAATTTCGTAACATCATGCTTGa
gatgaaaattgaagataTTTACTGGTCTTCTACGGGTGAATATTcgaatt
ttgatatttctctAAAATCACATGGACCAGATGATTACAAAACCATTTAA
Coding sequence (CDS) from alignment at sc0000080_pilon:982265..983464+ >XLOC_037478 ID=XLOC_037478|Name=XLOC_037478|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000080_pilon:982265..983464+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATATCAATTTATTACCAGATGAGATACTAGAAATAATCATTGCGTT
CTCGGAAAAGGAAGATGCAAAAGCTTTATCACGAACATCAAAAAGAATGT
ATAATCTTACTATAGAACGAATTTGGTCAAAACCAAGATTTTATGGGAAA
CGAAATCATTCCTTCTTGACAAAAATAACGAAATTTCCGATTAAAGAATT
GCATACAAATGAGTTTAATTGTCTTTGGTCTAATATTTGTGATATCATTT
CTGGGCTTGACTTATTACATATAGATAATGACGACGATGATGAAACTTTT
GAAGACAGATTAGACGATATTTGTGAAATTGCAAAACCACCAATTGTTCT
GCACACAAATGCCCTTAATATGAAATACAGAGACGActttaatttgtttt
tgaacGAAATTCTCGGCGGTGCTTGTTCGATACGAAAATTGATAATCAAT
CACAAGTTTAATAGCGACGAAAGAAGAAACTGTGCTTGGTCACCTAAACA
ACTTGAAATGGTCagtgaaaaagttttcattgaGGAAATTTTGTCGAGTT
CTTTATCGATCACTGATTTTGATGAGCTTGTTAAAGTTTTGTGTAAACTT
AAAGGAACACGTGTCAATATTTCTGAAACGTTCAATAACCAATATATTTT
AACTGTTGAAGATTTGGATAAACTTGCATCGAATAACATAAAAGTTTTCA
AGATTGATTGTGTTGCCCTTGAATATGGTTTGTCGAGTGATGGCCTTACA
AAGTTTGCTCCtgtactttcaaaatttcaatctttGGAAGAGTTTAGCAT
TCGTCATGCTTACTGCCAAGATCCAATACCTATTCAGTTATTTATTGGTT
TACCGCTAATTACGCTTTCTACAACACAGATTCGTTGGGAAGCTGGTAAG
ATTGCTGAGATTGTTAAATTATTATCTGAAATCAAAACCCTGACCCATTT
AGACTTAATAAAAAGTAATCATTCAGATTATAAACTTTCCCTTGCggatt
ttgaacttttcaaaattttaccagTAGTAATGTTTTTGGAGTTGGAAGCT
TTAGATTTGACAAAGAAAAACGTTCCAGAATTTCGTAACATCATGCTTGa
gatgaaaattgaagataTTTACTGGTCTTCTACGGGTGAATATTcgaatt
ttgatatttctctAAAATCACATGGACCAGATGATTACAAAACCATTTAA
ATGGATATCAATTTATTACCAGATGAGATACTAGAAATAATCATTGCGTT
CTCGGAAAAGGAAGATGCAAAAGCTTTATCACGAACATCAAAAAGAATGT
ATAATCTTACTATAGAACGAATTTGGTCAAAACCAAGATTTTATGGGAAA
CGAAATCATTCCTTCTTGACAAAAATAACGAAATTTCCGATTAAAGAATT
GCATACAAATGAGTTTAATTGTCTTTGGTCTAATATTTGTGATATCATTT
CTGGGCTTGACTTATTACATATAGATAATGACGACGATGATGAAACTTTT
GAAGACAGATTAGACGATATTTGTGAAATTGCAAAACCACCAATTGTTCT
GCACACAAATGCCCTTAATATGAAATACAGAGACGActttaatttgtttt
tgaacGAAATTCTCGGCGGTGCTTGTTCGATACGAAAATTGATAATCAAT
CACAAGTTTAATAGCGACGAAAGAAGAAACTGTGCTTGGTCACCTAAACA
ACTTGAAATGGTCagtgaaaaagttttcattgaGGAAATTTTGTCGAGTT
CTTTATCGATCACTGATTTTGATGAGCTTGTTAAAGTTTTGTGTAAACTT
AAAGGAACACGTGTCAATATTTCTGAAACGTTCAATAACCAATATATTTT
AACTGTTGAAGATTTGGATAAACTTGCATCGAATAACATAAAAGTTTTCA
AGATTGATTGTGTTGCCCTTGAATATGGTTTGTCGAGTGATGGCCTTACA
AAGTTTGCTCCtgtactttcaaaatttcaatctttGGAAGAGTTTAGCAT
TCGTCATGCTTACTGCCAAGATCCAATACCTATTCAGTTATTTATTGGTT
TACCGCTAATTACGCTTTCTACAACACAGATTCGTTGGGAAGCTGGTAAG
ATTGCTGAGATTGTTAAATTATTATCTGAAATCAAAACCCTGACCCATTT
AGACTTAATAAAAAGTAATCATTCAGATTATAAACTTTCCCTTGCggatt
ttgaacttttcaaaattttaccagTAGTAATGTTTTTGGAGTTGGAAGCT
TTAGATTTGACAAAGAAAAACGTTCCAGAATTTCGTAACATCATGCTTGa
gatgaaaattgaagataTTTACTGGTCTTCTACGGGTGAATATTcgaatt
ttgatatttctctAAAATCACATGGACCAGATGATTACAAAACCATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:982265..983464 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1200:1 |
|
