|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:912811..915074+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040607 ID=XLOC_040607|Name=XLOC_040607|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2264bp|location=Sequence derived from alignment at sc0000041_pilon:912811..915074+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGCGACCACAGTACAAACTGTTGCCTACCCGACTGTGGCTCAACCACA
AATCGTGGTTCCGGCAAACAACCCACGTGGTATGAATGTCAAATCTATCC
GTGGACTAGGTAAGTTCttctgtatacttttttttctacgaacaaactat
ataagaacataaggcttcgatttgCGAAATGTTAAGAGGCCTCAAAattg
ttggatgttcttatttataaacaaaaggTGTAGTCTTTTTCTGCCTATCA
GCCCCAGATTATTGAAAAGCAGATCTTCTTAGGTATATTCAAGATAAGTT
ATAATTAAAATTCCTCTGCCAAGCCAGTTCACTAATGTTATCTTGTGGAT
CAAGTTTTATATGCTCTTTTTATTTTGGAAGCTTCTAAAcagaaaaagtc
agggaaaaggAACTAGATAACATAACCTGAGAGCTGCACTGGCatatata
ttcaaaaaatatattcaaaaaacgatcaaaaGGTCGATCTCTCTGAGTGT
GGTAATGCAATGATGAGAAAAGACGAAAGGCATAACTAATTAAATCACGT
GTTATATTATTTAGGGATCACACAAATTGTGATCGGAGCATTAACTGTTC
TTTTGGGGATTATCGCTATCGCTGTTTTCGAATATGGATACTGGGTGAAT
GGTAGTGGCTCTGGTATTTGGTTTGGTATCTGGATTCTGATCACCGGTAT
TATTGGTGTGATGTCGGCCAAGAATCCTCAACAAACATCTTTGAACGGTG
TCAACATGGGATTCAGTATCGTGTGTTGTGTCGTCTCATTTTTTGTTGGT
ATCTTCTATATCGTCGCCCTTGTGtaagttttgctttttttttttaattt
tgatctaTTTTGTTCTATTGGTCTAATGGTCTTTTCTTCTTGACATccca
atcaaaaatataaagCCTCATAAATGACAACGAGGTGACTGATTACAATG
GGGTAAACTTCCCCTAGTTTAGAATTTCCCTGATAAGAGGGATAGCAAAG
AAGGGAAAGGTTAAGAAAAGGGTTGAAAACCAAACTCATTTTGATGTTGA
GGGTAGATAGAATCGATATTTAACTTAGACAGCCCAGTAATTTAGGAATT
ATAGACAATCTTTTGTTTTCACGGGGCCTACGACCAGCCGGCTTGGCTtt
ctatgaactgaacagaacattAGAAGGAACATCCCCTAGTTTGCAACACT
GACGCCTTAGACTACCCAACCATCGCTAGGGGGTGTGCAGTAAAGTTACT
TCTAAAGTGTTCTAATTTTAAATTAAGTAAATGCAATGTCACAAAATGAT
CGTTATATATCATTAAGCCTAATCTAGTAGTAGGATTTTATTGGACTTCA
AAGTTGTGATATCTGTTCTCCCTATCCAGCTATTATAGCAATTGTGAAAG
TTATTGGAGTTACAACCACTGGAACAGTGGTGGCAGTTACCGCTACTACG
ATCCGTGTTATAATGATAAAGATTCCGGCACCGCTATTTATGCCATTCTC
ATGATACTGATGATCGCTGAATTCTTTATTTCCATGGCTGTTTCGATTGT
CTGTTGTCAAAACGGATGTTGCCGATCATCTGCTGCTGGAGGTAAGTGGT
TTTCTCACTTTCTCACTGgctaaacaaaatctttgatcgtagcttttttt
gaaaagctcaatgTAGGGTAAATGCACCGAAAGTGtattgatcttttttt
tcttaaacaCATTGTGATGTAGCGCCGTAGAACGTAAAGGCAACATAACG
TTGATTAGggtagtttttttcatttttatttaagcGTATAGATATCACGG
CCAAAAGTGAGAAGTCCTTCATTTGGATATATCTTTTTACAACTTCTTTA
CTTTCGTCGTTTTCAGTAGAGGAGAGATGATATTTTCACTTTAAAGTTGT
TTTAACGATTAtccaaattgaaaataaatatatatgcTGCAATCGATTTT
GATCATAACTctcgtgacattttcttttagGCGTGATCATTCAACAACAA
CCTGGTCCTACCATCGTTTCATCCACTGGTGTTGTCATGTCTTCTCAAGC
CCAATACCCTGCTCAACAAGTTGTCTACCCACCTCAATCTGTTGCTGGCT
ACCCACCCCAATCACAAGTCGTCTACCCTGCTGGTGGATACCCGAACCAA
CAATATGTTACAACTGCAGCACCAATGGGAGGTGTCCCACAGCCTGCTTA
CTCCAACCAGATGCCACCCCAGGATCCATCAAAGGTAGCCCCACCACCTC
CATACACTAGCTAG Coding sequence (CDS) from alignment at sc0000041_pilon:912811..915074+ >XLOC_040607 ID=XLOC_040607|Name=XLOC_040607|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1728bp|location=Sequence derived from alignment at sc0000041_pilon:912811..915074+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGCGACCACAGTACAAACTGTTGCCTACCCGACTGTGGCTCAACCACA
AATCGTGGTTCCGGCAAACAACCCACGTGGTATGAATGTCAAATCTATCC
GTGGACTAGatGGCGACCACAGTACAAACTGTTGCCTACCCGACTGTGGC
TCAACCACAAATCGTGGTTCCGGCAAACAACCCACGTGGTATGAATGTCA
AATCTATCCGTGGACTAGGGATCACACAAATTGTGATCGGAGCATTAACT
GTTCTTTTGGGGATTATCGCTATCGCTGTTTTCGAATATGGATACTGGGT
GAATGGTAGTGGCTCTGGTATTTGGTTTGGTATCTGGATTCTGATCACCG
GTATTATTGGTGTGATGTCGGCCAAGAATCCTCAACAAACATCTTTGAAC
GGTGTCAACATGGGATTCAGTATCGTGTGTTGTGTCGTCTCATTTTTTGT
TGGTATCTTCTATATCGTCGCCCTTGTGGATCACACAAATTGTGATCGGA
GCATTAACTGTTCTTTTGGGGATTATCGCTATCGCTGTTTTCGAATATGG
ATACTGGGTGAATGGTAGTGGCTCTGGTATTTGGTTTGGTATCTGGATTC
TGATCACCGGTATTATTGGTGTGATGTCGGCCAAGAATCCTCAACAAACA
TCTTTGAACGGTGTCAACATGGGATTCAGTATCGTGTGTTGTGTCGTCTC
ATTTTTTGTTGGTATCTTCTATATCGTCGCCCTTGTCTATTATAGCAATT
GTGAAAGTTATTGGAGTTACAACCACTGGAACAGTGGTGGCAGTTACCGC
TACTACGATCCGTGTTATAATGATAAAGATTCCGGCACCGCTATTTATGC
CATTCTCATGATACTGATGATCGCTGAATTCTTTATTTCCATGGCTGTTT
CGATTGTCTGTTGTCAAAACGGATGTTGCCGATCATCTGCTGCTGGAGCT
ATTATAGCAATTGTGAAAGTTATTGGAGTTACAACCACTGGAACAGTGGT
GGCAGTTACCGCTACTACGATCCGTGTTATAATGATAAAGATTCCGGCAC
CGCTATTTATGCCATTCTCATGATACTGATGATCGCTGAATTCTTTATTT
CCATGGCTGTTTCGATTGTCTGTTGTCAAAACGGATGTTGCCGATCATCT
GCTGCTGGAGGCGTGATCATTCAACAACAACCTGGTCCTACCATCGTTTC
ATCCACTGGTGTTGTCATGTCTTCTCAAGCCCAATACCCTGCTCAACAAG
TTGTCTACCCACCTCAATCTGTTGCTGGCTACCCACCCCAATCACAAGTC
GTCTACCCTGCTGGTGGATACCCGAACCAACAATATGTTACAACTGCAGC
ACCAATGGGAGGTGTCCCACAGCCTGCTTACTCCAACCAGATGCCACCCC
AGGATCCATCAAAGGTAGCCCCACCACCTCCATACACTAGCTAGGCGTGA
TCATTCAACAACAACCTGGTCCTACCATCGTTTCATCCACTGGTGTTGTC
ATGTCTTCTCAAGCCCAATACCCTGCTCAACAAGTTGTCTACCCACCTCA
ATCTGTTGCTGGCTACCCACCCCAATCACAAGTCGTCTACCCTGCTGGTG
GATACCCGAACCAACAATATGTTACAACTGCAGCACCAATGGGAGGTGTC
CCACAGCCTGCTTACTCCAACCAGATGCCACCCCAGGATCCATCAAAGGT
AGCCCCACCACCTCCATACACTAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:912811..915074 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-864:1983 |
| Aaloc | 370-579:1381 |
| Aaloc | 112-366:567 |
| Aaloc | 1-108:1 |
|
