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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:389966..393181- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043888 ID=XLOC_043888|Name=XLOC_043888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3216bp|location=Sequence derived from alignment at sc0000111_pilon:389966..393181- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATTTCTTTCGGACGGATTTTTTACGCGACGACACAAAGTTGAAAA
TGTCGAGTATTATTTGAAAGAGAGTGTAAAGAAAATGGCGGAACGAGATG
GTAAGATAAGAATTTAATTTTTGATTTTTGATTTTTTTCATTTCGAATTT
TATTTTTAAAGAAAAATCGGGTTATATCTTTTTCTGAAGGACTTTAAGTA
TTAAAACTTAAATATTTGCATGGGTCACAGGCAAGAAACAACAAAACTTT
ATTTATTGATAAATTTTCTCTCTACTCTACGGTAGAGTATCTTCTGATCT
AGACGCTCTACCATAGAGTAGAGATCCAAATATTTAAGTTTTAATAATGG
AAAAGCAATCACTTTCACTGAAGAGTTTCATAACATTATGCTTTCTCATT
CCAATATAAGGTAGGTACTTGATCAAATCCAATCGCTCTCTGCTCTACAA
AATCAATTTTTACGAACAAAAGATTATTTCATTCATCTCTAGTAACAGGT
TCAACTGCATTGGGCAAATCCATTTTATATACATACAGGGGATGGTAGAA
TATTTCCAGGGGGTCTAAAAGATTGATTTTAGTTCGCCCACCGTCACTTT
AAGGTGTGAAAAGAAATTTTCCACGGGGTTATTTGAAAGAGTTATTTTAT
CCACACATTTAAAAGAAATATTTTTTGACGTAAAAAGGTTCGTTCACCCC
CCCCCCTGTATGGAAATTTAATGGAATAGCTCATTTTCCACGTTAGAAAT
TGTTACAGTCGACGCTCTTTCTTTGATTCGACGTTTTACTATTCGGCATA
CTTCATTATTCGATAATATTGAAAGTCACCGTCAACAAGAAACTCCCATA
AACGATACTCTAACATTTCTCGGTGAAAATCCGATTTTTCTTGTAAATCG
AATCAGAGAGCGTCAACTTTATTAACTCTTCTTTGCTGGCATTTGGAAAC
CACTCTCTACGAAACTATTCTAAATACGCCGACACGGTTTCCTCGTGGTA
GTAAAAAAAGTGTGCATTTGAAGCGAATGGAATGGTTGCTGTTAAACGCA
TTTCCGTACTTTTTATTTTCCAGTGTTGATCAAGCGGCCCGCCAAAGTGG
TGAGCGAGCGCAATCAGATGACGGAGAGCGGAATACGAGATATTTTTCAA
CTCTACGGTGAAGGGAGAGGAAATTCAGTCCAAGCTTCTCAACTGAGAGT
GGTAAGCTTAAGTGTTTTGTATTTACACGTTTATTTTTTTTTTCATTGAA
GATTGGAATCAAGTCATGAAAACCTGGAGTATAAAATATCATCATCTATA
TGCTAAATAAGTTGAATTTCAAAAAAGCCAGTGTTCTTTCACCAAATTTT
GGCTTAGATATAATTATTTGAGATACTAACAGTATAACTTTCCTTTGACA
GTCGATGGCCTTTAGGTCTTTGGAGGAGGGGGGTTAGGTTTTTCTGCTTG
TGCAAGGTGCTTTAAAAGTTCATCAAAGAGAGCTATTAAAAGAATCATAC
CTAATTACTCTGAGAGGCCCCCCAGCGGTAGTGATCACGATATCACACAC
TTTTGTGTCTTTAATCAGGATTACGCAAATCAGGACAAAGAATGGACAAT
CATGCATTCCTTTGAAAAAGTCCAAATCACGTATAACGGCTCAAAAATCT
TTCAAAAAGTTTTAATCTCTCATCACGTAATCACGAAGAAAAAAATTTCC
AAATCACGTAATCACGAAAACCGCTTGGGGGCATCCTCAGAGCTATTAAA
AAAACTGTTTGTATCAGACTACCTATCTATATTTTTGTACTAAAAGATCT
TACAATCCAAACTACAGTTGGTGCTCTCTAATTCGACGTTCTACTATTCG
TTAGGCTCCTTTTTCGATGAGATTTAAAGTTCCTGTCAGCAAGAAACTCT
CATAAAGGACGCCCCCTTATTCGATGAAAATCCAATTCCCCTTGAAGATC
GAATTAGAAAGCGTCGACTGTATACAAAAAATTCTCACTCTACTTAGATT
TTCGAGCAGATGGGTTTTCCGATGTCAGACGATCATTGTGAGAATTTGAT
CGAAACTGCTGACCAAGATGGCGATGGAGCTTTGGATTTGAAAGAATTTG
TCAACTTCGTTTTGTATGGAGTGCTCAATGTGGAAGATACTGAGGTAAAA
GTTTTACTCACCTATCAACCACAGTTATCTATATAAAACATTAGATATAG
CTAATCTGTCTTTCCCAAGCCCCGGTTGTAATGATAATAATATGCCATCT
TTCCGAAATGTTGACACGAATAAATAGCAGTTCAGTGCCGGTAATTGTTT
CAATCAAAACAAACCTCAAGAGAATGGTCTTGATCGACTCTCCTCACACT
AAGGGTAGATAGTTTTTTTTCTAAACTCCTTTCATTATAACAGCACTTTC
TTGTTGTTATATTTGGCATTTCTAAACTTTTCTTTGATCTATTTTTGGGA
CTTGGTACTATTTCTCCAAATGTTTTATTCTGACACACTGTAGCACAGAG
TTAGGGATTTCCGGTATCTAAAAATCTTGATAAATGCTCACCAAAGTATC
ACCAACCTAGATTTAACAATCAAGTGAGAATTAATTGCCCTCCCAAACCA
GTCATGGTCCTTTTCAAGTTAATTCTCAGAAATGAGTCTGAATTTAATTG
TTGTACACGTTTTTTTAAAGAACATTCTTTTTGAGTTTTAAGCCTAAAAA
TGTTCTTAACATGTTCTTATTTTCCCCATTTTTTATGTATTTTTGTCCAT
TTTCCTAAGAAATTGGCTGTCCTCAAAGCCTTAAAGTGTTCTTAACTTGT
TCTTAACATTTTGACCATCGAAGCCTTATGTTCTTATATGATTTGTTCTT
ATGAAAGAAAGAAACACGTGTGCTCGTTGAAAAGATATTTGAAGCTTTAT
TTTTAAATCACTTTAGGATGAAATAATGGAATGCTTTCGTGTTTTTGATC
CTGATGAAACTGGCTTCATCCCGTCACAAGAGTTACGACGCATAATGACA
CAACTTGGAGATGAACTGACCGACAGTGAGATTAATAAAGTCATTCAACA
GTCAGATATAGATGGAGATGGGTCAATCAACTATGCTGAATATGTCAAAA
AAATTTATCTTTCCAACCATCGATACGAGGCAGTCAATAAAAGAGATTGG
GAAAATATTTTGGCCAAAATGAGAAATGTAAGCTTGGAAAATAATACTCC
TGAAGCTGAAGCTTAG Coding sequence (CDS) from alignment at sc0000111_pilon:389966..393181- >XLOC_043888 ID=XLOC_043888|Name=XLOC_043888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1350bp|location=Sequence derived from alignment at sc0000111_pilon:389966..393181- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATTTCTTTCGGACGGATTTTTTACGCGACGACACAAAGTTGAAAA
TGTCGAGTATTATTTGAAAGAGAGTGTAAAGAAAATGGCGGAACGAGATG
ATGGAATTTCTTTCGGACGGATTTTTTACGCGACGACACAAAGTTGAAAA
TGTCGAGTATTATTTGAAAGAGAGTGTAAAGAAAATGGCGGAACGAGATG
TGTTGATCAAGCGGCCCGCCAAAGTGGTGAGCGAGCGCAATCAGATGACG
GAGAGCGGAATACGAGATATTTTTCAACTCTACGGTGAAGGGAGAGGAAA
TTCAGTCCAAGCTTCTCAACTGAGAGTGTGTTGATCAAGCGGCCCGCCAA
AGTGGTGAGCGAGCGCAATCAGATGACGGAGAGCGGAATACGAGATATTT
TTCAACTCTACGGTGAAGGGAGAGGAAATTCAGTCCAAGCTTCTCAACTG
AGAGTGATTTTCGAGCAGATGGGTTTTCCGATGTCAGACGATCATTGTGA
GAATTTGATCGAAACTGCTGACCAAGATGGCGATGGAGCTTTGGATTTGA
AAGAATTTGTCAACTTCGTTTTGTATGGAGTGCTCAATGTGGAAGATACT
GAGATTTTCGAGCAGATGGGTTTTCCGATGTCAGACGATCATTGTGAGAA
TTTGATCGAAACTGCTGACCAAGATGGCGATGGAGCTTTGGATTTGAAAG
AATTTGTCAACTTCGTTTTGTATGGAGTGCTCAATGTGGAAGATACTGAG
GATGAAATAATGGAATGCTTTCGTGTTTTTGATCCTGATGAAACTGGCTT
CATCCCGTCACAAGAGTTACGACGCATAATGACACAACTTGGAGATGAAC
TGACCGACAGTGAGATTAATAAAGTCATTCAACAGTCAGATATAGATGGA
GATGGGTCAATCAACTATGCTGAATATGTCAAAAAAATTTATCTTTCCAA
CCATCGATACGAGGCAGTCAATAAAAGAGATTGGGAAAATATTTTGGCCA
AAATGAGAAATGTAAGCTTGGAAAATAATACTCCTGAAGCTGAAGCTTAG
GATGAAATAATGGAATGCTTTCGTGTTTTTGATCCTGATGAAACTGGCTT
CATCCCGTCACAAGAGTTACGACGCATAATGACACAACTTGGAGATGAAC
TGACCGACAGTGAGATTAATAAAGTCATTCAACAGTCAGATATAGATGGA
GATGGGTCAATCAACTATGCTGAATATGTCAAAAAAATTTATCTTTCCAA
CCATCGATACGAGGCAGTCAATAAAAGAGATTGGGAAAATATTTTGGCCA
AAATGAGAAATGTAAGCTTGGAAAATAATACTCCTGAAGCTGAAGCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:389966..393181 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 376-675:301 |
| Aaloc | 229-375:1220 |
| Aaloc | 103-228:2142 |
| Aaloc | 1-99:3217 |
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