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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:439788..442640+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010038 ID=XLOC_010038|Name=XLOC_010038|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2853bp|location=Sequence derived from alignment at sc0000238_pilon:439788..442640+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTCCCGAGAAAGATGTCAAGCCAGCTTTGAGGATGCCATAATTACACA
AAACATGATGTGCGCTGCTGCAAGTGGAACTGATGCTTGTCAGGTACATC
TATCTTTTTTACAATTGACGGAGATATGTAAATAAACTACTCCTAACACT
CAACTATTTCTTTTGAATggtaatattttgataataaatCATTTTCGAAG
AAACATATTATTTGTTGCATTATATAGGGAAAGGTTGCCATTGAAGGTTC
TTTTAATAGATCTCAACAACTATATCCCCGACTTTTAAGTGAATTAAATT
TcacgtggattaattttcacgacTTTCGCgagttttggcccttttcgcga
aaattagtcctcgcgaaatattcaaaatcaggattttggccaaaacccct
atgaAATTGAACGAATTTGGGTGAAAAAGTGCGGACACTTTTTATCCACG
CGAAACTTTTGGATTCTcaattcgcgaaaaaaagttcacgcgaaaattta
tccattaTATCGTcctttgaaatatattgaatattattttcaGGGTGACA
GTGGAGGTCCAATGGTTTTAAATCAAAGAGATGCAAATGGTATCGATCAG
TTTTATTTGGCCGGTATCATAAGTTGGGGAAGAGGATGTGCTCGGCCAGA
TTTCCCAGGAGTATACACAAATGTGGCTAATCTTCGTGGATGGATTGATG
AGATTGTAAGTGCTGACCAAGAAGTTATAATTGAAACACCTGAAGTTACT
GAACCATCTGAAACGATTGACACAGCTGAAGGTATCTCTCAACCTTTACC
TAAACGTCAAAATTACGTATATACGGAAACTTACTTTTTCATTAACATTA
TACATCAACTTTATAGCAACTATCTTTGATGCATAACATTGATAAAGTTT
TTAAGACATTCAACACTGCAAGACTACCTTGAATCAATTGAAATCAAGTG
AATCAATTTACGCGAGGATTATATAGTTTTTCGGAAAAATCCCGAAATTT
AATGATCGTGAAATTTTATAGCCAGGAATTTTGCCAAAAACTTTATATCT
TTTGCCAAAACCTCTAgggaaatgaaagaaattggactcttccagaaaaa
attcgctcatggggggggggggtggaggatatattattttgtctttgatc
tacccctggacatttcgatttttcaccccctggacacgtgttttacccct
ggacaagcatcaaattgaccccctggacacaaatatttacccctggacat
cgcTGATTCACCCCCATGtacatggcagtttttcaggtttttttcaatac
ccctggacaatatatcctccaccccccatgaatggtttttttctggaaga
gcccattagtAGAAAAAGAGACGAAAATGAAAAGATTCTTATTTGAGCAC
TTAGACTTCAAAATTCGCCCTAACTTACAGCCGTCACAAAAACTGCTTTA
GAAAATTCCAGCTTCCTCTATACTAACCAGCTTTTCATTTCCTTTGTTTT
AGATGTTGTTCCACTTTTCCAATTCTTCAGTCAAAGAAATAGAGATCACT
TTCACACATACAATCAAAGAGAAGCTACCCGAAGATACAGATTGAAGAGA
AATAACAATGTTGTCTGTAGGATCTTAAGAAGGGGCTTACCAGAAGGAAC
AAGACCATTGTATAGATATTTTGATGGAAGTCATAGAAGAAGGAGCAGAA
CTTTGAATGATCATTTCATGACTACTATTGAGGCAGAAACGCGGAGTAAG
TGAATGATTGTATTTTTACGACATATTTAAAAGTTATACAGACAcagtcc
tgatatgaaatatgtgtctgatatgaaacgggtgGTTATACCGGGTGGGC
CAAAAAACGCAACatatattttttggtttttatcttcaaatcgcttaaag
atataaaaatggatttttacattgttcccgtttcatatcagacacatatt
tcatatcaggactgtgtctgttatattatgctggtataagtaaaaaatag
tttttctgttcctctttttgaccaatcttgctccacatccgtgtcaattc
aatatcaaaaaggttgtgaattgaaattgacgagtaagcaaacgatatca
ctcttatttaaaaacaaaacctttaagcgaccgtagtgcaaagCTAGAGC
ATTCGGCTACGGTGCTCTGGGCTCACTTTTCACACACAGATATAACGTAA
AGAATGTTACAGATTCTATAAGGCTataaagaaatttatatttaGCACCG
TAGCTTAAAGTAAAACATTAACTCTGTCGTCACGTGTAATATTTCGGAGC
TACTCGGTTTTATTGTGTTGATTTCTGCGTCCTGACGTGGggaaaattta
acaaagaggCTGTGTTTTACTAGAATACGATACATTGAAGATAAGTCGCG
ATATTAATCCTGGCATACATTTCTAAATATTaatctgattggtcgaaaat
CAGAGCATTTTTAAAGACAAGCATCTTGAAATTCTACACAAACGAACCAA
GATTCGAtatcttcaataatttttctagATCCTACTCGGAATCTTTCTGA
AGTTGTTTTGTGAAATggttttgttcttttttcaagAGAACGATCTTCGT
CTTTATTTTGATATTCTAGTAAAACTTAATATTCCTTGCTTCGACTTTTG
TAGGTGCTGAATTCAGAAGTTACAGACGGCGAAGTATTGCTGGATATTGT
TTTACATCGCAAAAATCAGATACTCTTCCTTTACACCGCTATCATCTGAA
GACTGGAAACGTTAGAGACCACTATTATACTACTGAAGAGAATGGTCCTC
AAGGTTACACTCTCGATGATTTTACCGATCCTTGTTACGTTTATCCggca
taa Coding sequence (CDS) from alignment at sc0000238_pilon:439788..442640+ >XLOC_010038 ID=XLOC_010038|Name=XLOC_010038|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000238_pilon:439788..442640+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTCCCGAGAAAGATGTCAAGCCAGCTTTGAGGATGCCATAATTACACA
AAACATGATGTGCGCTGCTGCAAGTGGAACTGATGCTTGTCAGGTTTCCC
GAGAAAGATGTCAAGCCAGCTTTGAGGATGCCATAATTACACAAAACATG
ATGTGCGCTGCTGCAAGTGGAACTGATGCTTGTCAGGGTGACAGTGGAGG
TCCAATGGTTTTAAATCAAAGAGATGCAAATGGTATCGATCAGTTTTATT
TGGCCGGTATCATAAGTTGGGGAAGAGGATGTGCTCGGCCAGATTTCCCA
GGAGTATACACAAATGTGGCTAATCTTCGTGGATGGATTGATGAGATTGT
AAGTGCTGACCAAGAAGTTATAATTGAAACACCTGAAGTTACTGAACCAT
CTGAAACGATTGACACAGCTGAAGGGTGACAGTGGAGGTCCAATGGTTTT
AAATCAAAGAGATGCAAATGGTATCGATCAGTTTTATTTGGCCGGTATCA
TAAGTTGGGGAAGAGGATGTGCTCGGCCAGATTTCCCAGGAGTATACACA
AATGTGGCTAATCTTCGTGGATGGATTGATGAGATTGTAAGTGCTGACCA
AGAAGTTATAATTGAAACACCTGAAGTTACTGAACCATCTGAAACGATTG
ACACAGCTGAAGATGTTGTTCCACTTTTCCAATTCTTCAGTCAAAGAAAT
AGAGATCACTTTCACACATACAATCAAAGAGAAGCTACCCGAAGATACAG
ATTGAAGAGAAATAACAATGTTGTCTGTAGGATCTTAAGAAGGGGCTTAC
CAGAAGGAACAAGACCATTGTATAGATATTTTGATGGAAGTCATAGAAGA
AGGAGCAGAACTTTGAATGATCATTTCATGACTACTATTGAGGCAGAAAC
GCGGAATGTTGTTCCACTTTTCCAATTCTTCAGTCAAAGAAATAGAGATC
ACTTTCACACATACAATCAAAGAGAAGCTACCCGAAGATACAGATTGAAG
AGAAATAACAATGTTGTCTGTAGGATCTTAAGAAGGGGCTTACCAGAAGG
AACAAGACCATTGTATAGATATTTTGATGGAAGTCATAGAAGAAGGAGCA
GAACTTTGAATGATCATTTCATGACTACTATTGAGGCAGAAACGCGGAGT
GCTGAATTCAGAAGTTACAGACGGCGAAGTATTGCTGGATATTGTTTTAC
ATCGCAAAAATCAGATACTCTTCCTTTACACCGCTATCATCTGAAGACTG
GAAACGTTAGAGACCACTATTATACTACTGAAGAGAATGGTCCTCAAGGT
TACACTCTCGATGATTTTACCGATCCTTGTTACGTTTATCCggcataaGT
GCTGAATTCAGAAGTTACAGACGGCGAAGTATTGCTGGATATTGTTTTAC
ATCGCAAAAATCAGATACTCTTCCTTTACACCGCTATCATCTGAAGACTG
GAAACGTTAGAGACCACTATTATACTACTGAAGAGAATGGTCCTCAAGGT
TACACTCTCGATGATTTTACCGATCCTTGTTACGTTTATCCggcataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:439788..442640 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-774:2656 |
| Aaloc | 334-573:1505 |
| Aaloc | 94-330:544 |
| Aaloc | 1-93:1 |
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