XLOC_016007 (mRNA) -

Overview
NameXLOC_016007
Unique NameXLOC_016007
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000485_pilon:68224..68681+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016007 ID=XLOC_016007|Name=XLOC_016007|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=458bp|location=Sequence derived from alignment at sc0000485_pilon:68224..68681+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATTTTcttgtttaaagttttttgtcaGGCTCCATGTCTGGGCACCATA CAACAAGACCGACTGCACAGAGGCTTGGAAGAAGTCACGTTTTAACTCGA CAGACAAAGCTGATTTCCAGATTGATCTGAGGGAGTCTAGAGCCGACCAG GATTTTGCGATTCTTGATTCTACATCTTTAAAGGATGTTTGCAATTTGGC TACCGAGATAAACGAAAAGTTCCGCGATTTGATAGGATCACCATTCAGGG AGTTAATTGTACCATCTTGATTGAAAGTCATAAATTCTGTTTTTGACGCA TTGACGTAGAGATCGATTTCAGCAGCTACTTTTTCAACGGCTGTTTCCGT AAGCCAAAAATCGAACGTCTGGACCGGCTCATAACagaaaaattgacgaa aattgACCTCACTCCTTCATCTGTAGCTCCAGTTCTaaagattgttttga aattctgt

Coding sequence (CDS) from alignment at sc0000485_pilon:68224..68681+

>XLOC_016007 ID=XLOC_016007|Name=XLOC_016007|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=808bp|location=Sequence derived from alignment at sc0000485_pilon:68224..68681+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATTTTcttgtttaaagttttttgtcaGGCTCCATGTCTGGGCACCATA
CAACAAGACCGACTGCACAGAGGCTTGGAAGAAGTCACGTTTTAACTCGA
CAGACAAAGCTGATTTCCAGATTGATCTGAGGGAGTCTAGAGCCGACCAG
GATTTTGCGATTCTTGATTCTACATCTTTAAAGGATGTTTGCAATTTGGC
TACCGAGATAAACGAAAAGTTCCGCGATTTGATAGGATCACCATTCAGGG
AGTTAATTGTACCATCTTGATTGAAAGTCATAAATTCTATTTTcttgttt
aaagttttttgtcaGGCTCCATGTCTGGGCACCATACAACAAGACCGACT
GCACAGAGGCTTGGAAGAAGTCACGTTTTAACTCGACAGACAAAGCTGAT
TTCCAGATTGATCTGAGGGAGTCTAGAGCCGACCAGGATTTTGCGATTCT
TGATTCTACATCTTTAAAGGATGTTTGCAATTTGGCTACCGAGATAAACG
AAAAGTTCCGCGATTTGATAGGATCACCATTCAGGGAGTTAATTGTACCA
TCTTGATTGAAAGTCATAAATTCTGTTTCCGTAAGCCAAAAATCGAACGT
CTGGACCGGCTCATAACagaaaaattgacgaaaattgACCTCACTCCTTC
ATCTGTAGCTCCAGTTCTaaagattgttttgaaattctgtCTGTTTCCGT
AAGCCAAAAATCGAACGTCTGGACCGGCTCATAACagaaaaattgacgaa
aattgACCTCACTCCTTCATCTGTAGCTCCAGTTCTaaagattgttttga
aattctgt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016007XLOC_016007-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000485_pilongenomesc0000485_pilon:68224..68681 +
Properties
Property NameValue
Aaloc289-405:342
Aaloc229-285:228
Aaloc223-225:225
Aaloc1-222:1