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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000517_pilon:98546..101273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019480 ID=XLOC_019480|Name=XLOC_019480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2728bp|location=Sequence derived from alignment at sc0000517_pilon:98546..101273- (Clytia hemisphaerica_ch_hm2_pilon)
TTAACAGTAACAACAAGCAAAATGATTGCACATGCTAGTTTGGAACCTTC
CAAGCCACCTGTTCCAAGTTTACCTACTGTGAAGGTTGATTATCGAGTTG
ATAATAGCTTGGATATAACACCTGTCAAAGTCAAACCAGCCAAGAAGGTT
TCACTCCCGAAAAAAACAGAGAGTGGAAACAGTAGAAGAACAACTTCAAA
GAAGAAAGTGGAATTTATTGTGAATAATTATCCATCAGAGTCGATACAGG
AAAACAGGTAAAGCAAATTTCAGTTGCATATTCTATGTGTATTATTTCTC
ACATATCTTAGCTTAGCCCAAATCTTTGCCCATCATTACTGTGAGGGATG
CTTTAGTTACTCGAATGAGGGATGCTTAGTTACTCGAGTCTAGTGTCAGA
TGCAATGTTAGGATCAATCGACTATCTAATCAAAAAAGAGCCTACGAGGT
TAGTGTCACACCATGTTTTGGATACCATAACAGCAGTTTCTTGTTTGGAT
CGGTAGCAATCTCTAGAAGAACGAATGCGTTGTTCTATTAATATCGCCGT
TGACGAAATTCAAATAAGTTGATAAAATGTTTCTAGTTGGGTGCTTTCAC
AAGGAGGAGGATATAGAATTGTACGTCCGATTTTTTCGGACCTTACCAAT
CACTTTTTAATTTTTTAAATGCATTTGAATGGCTTTTTATTAAAATGGAA
GATTTAAATGTTACAGGTTCTGAAAAAATCGAGTTTTAAGACTTTCAAAA
ACTCTGGTTAGGTTGGGCTTGGAAAAATATTTGTTTGCCAATAGAGGTTT
TGATTTGAATAAAACAAATTATTCTTTAACATGACAATGAAATTTCTACC
GTGATATTACCGTGAATCAAAGATGTTATAAAAAAGTATAGAAGATTACC
AAACTTTTTACTATGTTTAATATCTGACGATGGAGTTGAGCTGTTACTCT
TTAAAGATGTGAAGAACGAACCAAAATGACTACTCAAACTTAAGAATCGA
AATATTGAGTATTCTTGAGTCGGCCAGGAAGGTTTGACTTTATCTTAAAT
GTCAGTCTATTGAGCGAGCTCCGTGCTTTGACGATGCTTTTTATACATTT
TTATCCAGCTATGTTTCATAAATGAATATTGCCGCACTCAACAATAATTC
GACGTTCTACTATTCTATACACTCCATTATTCGATAATATTGAGAATCAC
CTCCAACAAGAAACTCTCATAAACGAGGTCCTACCATTTGATACACTCCC
CTAGTCGATGAAATCCGATTCCCCTTAGAAATCGAATTAGAGAACGTCAA
CTGTATTACCTTACCTTCTTTACTTTACCTTTTCGTGTCAAAATGCCAGC
TTGTACTTTTTATTTTCTTTCGGATGTTTGTATTTGTTTACGTGTGGTTT
TGCTCTCGACAACAAAACGCCTGTTTTTTGTAACATTCTTTTGTGGTGAC
ACATATTCTCCGAAGTATACTAACCCAGCTGACACACAACGCTGTTTCAA
CGTTAATCTAATGTTCACAACGTCCATTATAACGTTAGATGAACGTTGAA
CCAATGTTGTGAGTTAGCTGGGAAGTAGACGATACTCTCGCACGTTAGAG
GGATAGTAAACGCGGGGATATATATATGTTTGGAGCTTAAAGCCGCCAGG
GTGGTTTGGGGGGAAATTAGCGGCCGTGTGACTTGTGTAGACGACAGGGT
CGGCCAGGTACAAAGATGCTATGCCTTGTAATTTATACAGGGGATTCTTC
ATAACTTGAACACGCACGAGGAACGCAAATTTGTTCGATTTAAGTAAATT
TCGAATTATGGAGTAAGGTTTATAAGACATTGTTAGCTGAAGGGGCCTAT
TTCTCAAATGGGACAATTTGGGGCTGTTAAAAATGTATGTGGGTTGGCCT
TCATTAACCTAACATTGTATAAATAAGGCTAAAAAAGTGTCAAATAAGGG
TTCTTGTGTATCGTCGTTCACTTGACTAATAGTTCGATCTAATAATTAAT
GCCTTACAAAATCAATATTTATACTGTGACTTTAATTTTTAGAAATTAGG
CACTTTTCAAACAGAGGAGTAATAAATGATTTCATTCGAAAAAAAGGCCA
ATTTCATACCACATAATAATAGAAATGCAAGATTTTTAATTTTCTAAGAC
ACTTATTTTAGTCATGTGCAAGACGATATGGTCAGTTAAAATTTTTCTCG
TCAGTATTTTACCAAGTCATATTTATCATATAGCAATTTTACGATGTTCT
TTTTATTTTAAACAGTCTGGCAAACCCAACCTTACACACGACCAATCTAT
TGAAAAAGCAACTCGACGCATGCGTGAATCAAGAATTCGATTACGAAAAG
ACATTAAAGGAAATCGAACTGTCAGATAGTTTCAATACGCGTATAAACGA
AGAAATGACATGTCTATTAAACTATAAACTGCACGATCAAAAATATACGA
ATTTAACATCGATTAAAGACGATTCGCCCGATTTAAAATCGATAGCTGTT
CAGCGGAAAACTCTATATAAACCTCGGAAAAAGAAAATTGATACCAAACC
AGACCTAAAAGACTTTTACGAAGAAGAGAATTTCATTACGGAAAAACCGT
GTACGGATTTTGGACTTGATTTCGATGAAGATTTTTATGGGAATGATACT
GACAATGAAAATGAATTAGATAATGATTATTTGTTTTATATGTATCGAAA
GTATGACTTAGGCTCTTCGTACACTTGA Coding sequence (CDS) from alignment at sc0000517_pilon:98546..101273- >XLOC_019480 ID=XLOC_019480|Name=XLOC_019480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000517_pilon:98546..101273- (Clytia hemisphaerica_ch_hm2_pilon)
TTAACAGTAACAACAAGCAAAATGATTGCACATGCTAGTTTGGAACCTTC
CAAGCCACCTGTTCCAAGTTTACCTACTGTGAAGGTTGATTATCGAGTTG
ATAATAGCTTGGATATAACACCTGTCAAAGTCAAACCAGCCAAGAAGGTT
TCACTCCCGAAAAAAACAGAGAGTGGAAACAGTAGAAGAACAACTTCAAA
GAAGAAAGTGGAATTTATTGTGAATAATTATCCATCAGAGTCGATACAGG
AAAACAGTTAACAGTAACAACAAGCAAAATGATTGCACATGCTAGTTTGG
AACCTTCCAAGCCACCTGTTCCAAGTTTACCTACTGTGAAGGTTGATTAT
CGAGTTGATAATAGCTTGGATATAACACCTGTCAAAGTCAAACCAGCCAA
GAAGGTTTCACTCCCGAAAAAAACAGAGAGTGGAAACAGTAGAAGAACAA
CTTCAAAGAAGAAAGTGGAATTTATTGTGAATAATTATCCATCAGAGTCG
ATACAGGAAAACAGTCTGGCAAACCCAACCTTACACACGACCAATCTATT
GAAAAAGCAACTCGACGCATGCGTGAATCAAGAATTCGATTACGAAAAGA
CATTAAAGGAAATCGAACTGTCAGATAGTTTCAATACGCGTATAAACGAA
GAAATGACATGTCTATTAAACTATAAACTGCACGATCAAAAATATACGAA
TTTAACATCGATTAAAGACGATTCGCCCGATTTAAAATCGATAGCTGTTC
AGCGGAAAACTCTATATAAACCTCGGAAAAAGAAAATTGATACCAAACCA
GACCTAAAAGACTTTTACGAAGAAGAGAATTTCATTACGGAAAAACCGTG
TACGGATTTTGGACTTGATTTCGATGAAGATTTTTATGGGAATGATACTG
ACAATGAAAATGAATTAGATAATGATTATTTGTTTTATATGTATCGAAAG
TATGACTTAGGCTCTTCGTACACTTGATCTGGCAAACCCAACCTTACACA
CGACCAATCTATTGAAAAAGCAACTCGACGCATGCGTGAATCAAGAATTC
GATTACGAAAAGACATTAAAGGAAATCGAACTGTCAGATAGTTTCAATAC
GCGTATAAACGAAGAAATGACATGTCTATTAAACTATAAACTGCACGATC
AAAAATATACGAATTTAACATCGATTAAAGACGATTCGCCCGATTTAAAA
TCGATAGCTGTTCAGCGGAAAACTCTATATAAACCTCGGAAAAAGAAAAT
TGATACCAAACCAGACCTAAAAGACTTTTACGAAGAAGAGAATTTCATTA
CGGAAAAACCGTGTACGGATTTTGGACTTGATTTCGATGAAGATTTTTAT
GGGAATGATACTGACAATGAAAATGAATTAGATAATGATTATTTGTTTTA
TATGTATCGAAAGTATGACTTAGGCTCTTCGTACACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000517_pilon | genome | sc0000517_pilon:98546..101273 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 259-720:463 |
| Aaloc | 1-255:2729 |
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