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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000165_pilon:636306..642109+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037897 ID=XLOC_037897|Name=XLOC_037897|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5804bp|location=Sequence derived from alignment at sc0000165_pilon:636306..642109+ (Clytia hemisphaerica_ch_hm2_pilon) AtgcctaaaaagaaaaaagatacaCAGGATATACCTAATGATATGGCCAG
TGCAAGACAAAGCCTTGTGAATGGCCAGGGTACATCATCTTCTTATGGCA
GCACTCAAAGAAATTCACAGatgacttttcaaattcatgatGGTAGAAAT
GGTACCGTTCAAGATTTGGTTGTTGTCCAAAAGCTGGGGAAAGGTAGTTT
TGGAGATGTTTATAAAGTTGAAGATGAAAGAGGGAAAGCGTTTGCTTTAA
AGAGAATTTCGTGTAGAATGCCAAGCTATAGTAATGAACAAGCTAAATTG
ATTCAAGATCTTAtcggaaatgaaattttttctatGATAAATTTAAGACA
CCCAAACATTGTGCAATTATATTCTTACGATTTTGAAGGAATAGCAGCGC
TCCTTGTAATTGAGTTTTGTCCTGGCGGAAACTTGAATACCCGATTACGT
GACCCTGTCAATATGAAACAAAAGTTTGACTGGATGTCACAATTATTGGA
AGCAATGGCTTACCTCCATTACAATAATTTTGTTCATCGAGACCTCAAAC
CTGAAAACGTACTGCTTGGAGATAAAGGGCAGATGAAGCTGGCAGATTTT
GGTATCTCCAGAGCCTTTTTAACGcgagatttaaaaaataacgaagataG
CCTTTCAGAGTACGAAGAAAAATTTATGGATAAATATGCAGGTACCATGT
ATTGGATCGCTCCTGAAGTCTTTGATCGAAAATATACAGAAAAGGCTGAC
ATTTTCTCGCTTGGGGTGATATTCTATGCTATTTTGAcaaggaaatattt
aacttaTCAAGGTGAGTCTTATTATGGTGCATTTGTGAATCATCGTGGGA
AAGAAGTTGGCCTTGGTCTTGCTATGCATCGTTCTGAGAAAACACGCCTG
CCTTCCTTTGACGGATTGAAAAGTGAGGCGGAGAAGTTGGTTGTTGGCAT
GGTGACTGAAATGTTATGTTTTCGTGAAGAAGAAAGAATAAGTCTTAACC
GAGCGCAGAAAGTTCTTGAAGATGCAAAGCACTATTTACAAGAAGATGCC
ATATCCATGAAATCTTCTCATTCAAGAACCTCTTCGTTGTATACTGAAGC
TCCTTTCCAAGATGGGCAGGCTGACAAAAAATCCTGCTGTTGTACCTTTC
TTGGTGAGATTTGTTATAAAGACAAGTTGAACagcaaacattttttgaaa
tctggtCGATTTTCAGACCTTTTTGCagagttttttttacttctaaATCT
CTTCATCGAAAACTTCGATTCTTTACCTTTACAATTTCTATGTGTGAAAT
ACCTACCTACTTACCCTACTTCCTTCCTATTTATaaagaatttgattttc
tttttcaggaacGAAAAACGAGGATGAAAGGAATGAGGAGAAGAAATATT
TGGTTCAGTGAGAATTTTGTgttatctttattttcttatttataaaaaat
gaaatttcttttaaattacaCAATTCTTTCGAGTCACACACATTATACGC
CTCGAGCCCTGAAATCAGCAAATTTCTTTACTATCTCCTGAAGTAAAAAC
TATATTTAGATCAACTAACCATGACAAACGGTATAATTATGGTATAATAT
AATGGATGGTCAAAgctaatttctttgaaattgagATAGAATTCTAAGCA
ACCTTAGCCTTGAGCCGAAAATTGGGGTTGcttattaaaaatatataagt
aCTATGTAAGTTAAGGGCTCCATTTTTATTTGTTGTGGACCATATCAGAT
TAAACAATTTGAAGGGCTTTCATAGAAGCCAAAATGGAAGGCTGATAAAT
GTGTTTCTTTAGTTTTACTTCTTTCGTTTGTTTGTATTCAGCTTCTCTTC
GTGAATTCCAGTAAGAAAGCCCTCCTAACTTTATCATTGATGCTCTGAAC
CAACCGCTTGAAAATTGCTTAGTTGTTTTTCGTCATCTTTActttttaaa
tgataaattgttgaatttgatgGAGCCAATTTTTTGTGGAATCTTTCGTC
TGTACTTTTACACCTTAGTCCACCATCTTGCTACATAGataatttaaaat
attgaaaaacttttattgtAAGGAAATCAGAGGAAATCATTATTGTAGAA
AGATTTCATAATATAATTTATAGATAACAGACCTTAGTACGGAAGCCCAT
TAGTGCCATTTAGattttcctttaattttttaacgacgaaactaaaaaaa
ttgacgacgaaactaaaaaaattgatgacgaaactgagaaattgacgaaa
ctgacAATAAATTGTTATTTCGTTTCGTCGTTGAAAATTTTGACAACAAA
ACTACTACAAAGTCAAAATTGACAAcgaaactaaaaataaattgTTACTT
TGTTTCGTCGTTGaaaaaaaTCGAcaacgaaactaaaaaaaattgaaaat
ggtggccctaATGGTTTCAAAATGCAAATATCATTGATTCTGGTGGATTC
TGAAGATGGATTTGATAGTTCTGgttaaggacatgtttttttttgactgt
accaaaatgccgattttcaaccaacccggttcaaatcggcactaacagag
acagctgaaccctttcttatcgttattcaaaaataagaaaatagattagT
AGCTCTGTCTGATACTTTTTGTCCGACTttaatagcttttatggaactta
agatttcgcttgttgaatccggagtatttcaggatgaaaaaaatcatagc
ctatttcggatttataaagtcggctctatatttggcctttgtcgtgttca
atttatatacgaaacttatatcagggtgtagctaaaggattgaattttca
catcgacctcttttttttggaaaaaaccggaggaaaatgggatcaaattg
atcatttttgaaatctaggtgctaattctaatcgtatatattttcctgac
aagtctatctatcggggaagtgatttgagatttttgtttggttgataaga
aaggaatgaactaaagaaaacgggaattgttaaaatgagtgaaaaatgat
taaaaaagtcctttgtttgttttgatcataactcactccggcctttaaaa
aaattactcctcaggctattttatgattttaggctacctcaggaatgcat
agaaacctcctcaggaccgaataatgagtcatggagtgagatatgatcca
aaacactctatgattaattaatcctgaaatactccgaattttgagatttc
aaatagctcattttaaagcccttcccaaatatcaatacatatcaaaattt
tgggaaaattcatcatgcgaatgacgaaataattaaaataaagtgatttt
cacgattttcgaaaacctgattttggtacagtcaaaaaaaacatgtcctt
aatGCAATCCTGGTGAAGAAGCCCGTGAATAAGATGCTGGCAATGATGAA
TCAGAAGATTTTTGGAATCACCGGTGTCAATGGAATCATTTGAactaatc
aatgatgaaatgaatagtgcaaatgatgaaatcaatggttGATTCTTTCA
CCCGCACAATGGATTCCATCATCTCATCATGCTACAGCTTTTATTCCATA
ATCTGctccattgattccatcatttgcaccattgattccatcatttgcac
tattgattccatcatttgcaccattgattccatcatttgcaccattgatt
ccatcatttgcacctttgattccatcatttgcacCATCAAAGCTGTAGCA
TGATGAGATGATGGAATCCATTGTGTGGGTGATAGAACCaaccattgatt
tcatcatttgcactattgatttcatcattaattAGTTCCAATGATTCCAA
TGACACCGGTGGTTCCAAAAATCTCCACCATCACATCCTTATTCTGGTTC
ATCATCGCCAGCATCTCATTCACAAGAAGCAATTTGTTCGACGaagtaac
aattttttttcattttcgtcgtcaatttttcattttcgtcgtcaattttt
tagtttcgtcgtcattttttttcagtttcgtcgtcatcttttttagtttc
gtcgttaaaaaattaaaggatAATCTAAATGGCACTAATGGGCTTCCGTA
CCTTAGTACgcaatttttttacaattgatatatttttcataacgcttttt
ataattgtaatttttatagattaaattatTACCAGATAGCTGaccattat
ttttttcagtctTATGCTTACTTTATACGAGATAACTGAATATTGAAATC
AATTTAAATGACTTGGCCTAGTCTGGAGATTCATGCTCTCTAACCAAAAC
TTACACCATCCAAATAAATATCCCATGAGAAGCTACTCAGTGAGAGTATT
ATGGTATTTATATGTTCCATTTCGAATTTGTTAGCCACTCAAAATTGCGc
atttccaatcaaaacaattatatcacgtgatttcaacaattgtttaatag
ccaatagaattctgcgcTAGGATCCTGTATTTTCATAAATACTCGGCCTA
GTACTGGCTTTTCTCTGTTTTTCTGTTTAGTCCGGTACATACACACgtcg
aaatttttttatataaacgaTGAAGGCCCAGACTCTCAGCTAAACTTTGC
tgtactttttttcttattctgtTCCCCATATTTTGTCAATACAAATTCGT
ATTCTTGATCgtttttctaataaagtttCTCTTATCACTTTCAGATTGAA
TaagtaataaaaaaacaaatatgaaTTTATGGATGTATTATGAATGAGTT
AAATGGACCTCATAATCAAATTGGAACAATTAAAAAATGTCTTTCCAAAT
CTTGGACTGCAAAAGTGGATGTTTTCAGGAATTGACCATCGTCAGTAAAC
TCGACAAGGGTGCATTTGGAGATGTTTACAAAGTGGAGGATGCAAGAAAA
CATGTTTTCGCTTTAAGGAAAATGACCCCTGAACATTATTTAAATACAAA
AAACAATAGCGCCTCGAATGATAAACTTTATCAGGATGTTGTTGGTAATT
TGCTATATACCATGTCCTGCTTAAAACACCCTCATATTGTTCAATTGTAT
GCTTTCGATTTTGAAAGTACATCTACATTACTAGTTATGGAGTTTTGTCC
TGGAGGAAACTTGAATAACCGATTACGTGACCCTGTCAATATGAAACAAA
AGTTTGACTGGATGTCACAATTACTGGAAGCAATGACTTACCTCCATAAC
AATAATTTTGTTCACAGAAACTTCAAACCTGAAAATGTGCTGCTTGGTAA
TAGAGGGCAGGCAAAAATGGCTGATTTTGGACTTGCTCGACCGTTTTTAA
CGCgagatttgaaaaataacgaagatTACCTTTCAGAATACGAAGACATG
TTTATGGACAAATATGCAGGTACCATGTATTGGATTGCTCCTGAAGTCTT
TGATCGAAAATATACAGAAAAGGCTGACATTTTCTCGCTTGGGGTGATAT
TCTATGCTATTTTGAcaaggaaatatttaacttaTCAAGGTGAATCTTAT
TATTATGGTGCATTTGTGGAGCATCATGGGAAAGAAGTTGGCCTTGGACT
TGCTATGCATCGTTCTGAGAAAAACATTGAACCAAGTTTCGAGGGATTGA
AAGAGACAATAGAACAAGATATTGCAAACAATGTAATCAAAAGTCTGCTT
TGTTATGATTACAATAAAAGAATGAGTCTAGACCAAGCACACTCTTTCAT
TTTTGACGCACtcgctaaaattgaaaaacaatgcGAGAAATCAGTACTTG
AAGCAACAACGAATCCACCTGCAAGAAGGAAACCTTCGGTAGCCGGCTAT
TTCTTTAGTAAGTATTTTGTGGGCGAGGTTTTCTTAGGATACACGACATT
TTGA Coding sequence (CDS) from alignment at sc0000165_pilon:636306..642109+ >XLOC_037897 ID=XLOC_037897|Name=XLOC_037897|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2352bp|location=Sequence derived from alignment at sc0000165_pilon:636306..642109+ (Clytia hemisphaerica_ch_hm2_pilon) AtgcctaaaaagaaaaaagatacaCAGGATATACCTAATGATATGGCCAG TGCAAGACAAAGCCTTGTGAATGGCCAGGGTACATCATCTTCTTATGGCA GCACTCAAAGAAATTCACAGatgacttttcaaattcatgatGGTAGAAAT GGTACCGTTCAAGATTTGGTTGTTGTCCAAAAGCTGGGGAAAGGTAGTTT TGGAGATGTTTATAAAGTTGAAGATGAAAGAGGGAAAGCGTTTGCTTTAA AGAGAATTTCGTGTAGAATGCCAAGCTATAGTAATGAACAAGCTAAATTG ATTCAAGATCTTAtcggaaatgaaattttttctatGATAAATTTAAGACA CCCAAACATTGTGCAATTATATTCTTACGATTTTGAAGGAATAGCAGCGC TCCTTGTAATTGAGTTTTGTCCTGGCGGAAACTTGAATACCCGATTACGT GACCCTGTCAATATGAAACAAAAGTTTGACTGGATGTCACAATTATTGGA AGCAATGGCTTACCTCCATTACAATAATTTTGTTCATCGAGACCTCAAAC CTGAAAACGTACTGCTTGGAGATAAAGGGCAGATGAAGCTGGCAGATTTT GGTATCTCCAGAGCCTTTTTAACGcgagatttaaaaaataacgaagataG CCTTTCAGAGTACGAAGAAAAATTTATGGATAAATATGCAGGTACCATGT ATTGGATCGCTCCTGAAGTCTTTGATCGAAAATATACAGAAAAGGCTGAC ATTTTCTCGCTTGGGAtgcctaaaaagaaaaaagatacaCAGGATATACC TAATGATATGGCCAGTGCAAGACAAAGCCTTGTGAATGGCCAGGGTACAT CATCTTCTTATGGCAGCACTCAAAGAAATTCACAGatgacttttcaaatt catgatGGTAGAAATGGTACCGTTCAAGATTTGGTTGTTGTCCAAAAGCT GGGGAAAGGTAGTTTTGGAGATGTTTATAAAGTTGAAGATGAAAGAGGGA AAGCGTTTGCTTTAAAGAGAATTTCGTGTAGAATGCCAAGCTATAGTAAT GAACAAGCTAAATTGATTCAAGATCTTAtcggaaatgaaattttttctat GATAAATTTAAGACACCCAAACATTGTGCAATTATATTCTTACGATTTTG AAGGAATAGCAGCGCTCCTTGTAATTGAGTTTTGTCCTGGCGGAAACTTG AATACCCGATTACGTGACCCTGTCAATATGAAACAAAAGTTTGACTGGAT GTCACAATTATTGGAAGCAATGGCTTACCTCCATTACAATAATTTTGTTC ATCGAGACCTCAAACCTGAAAACGTACTGCTTGGAGATAAAGGGCAGATG AAGCTGGCAGATTTTGGTATCTCCAGAGCCTTTTTAACGcgagatttaaa aaataacgaagataGCCTTTCAGAGTACGAAGAAAAATTTATGGATAAAT ATGCAGGTACCATGTATTGGATCGCTCCTGAAGTCTTTGATCGAAAATAT ACAGAAAAGGCTGACATTTTCTCGCTTGGGGTGATATTCTATGCTATTTT GAcaaggaaatatttaacttaTCAAGGTGAATCTTATTATTATGGTGCAT TTGTGGAGCATCATGGGAAAGAAGTTGGCCTTGGACTTGCTATGCATCGT TCTGAGAAAAACATTGAACCAAGTTTCGAGGGATTGAAAGAGACAATAGA ACAAGATATTGCAAACAATGTAATCAAAAGTCTGCTTTGTTATGATTACA ATAAAAGAATGAGTCTAGACCAAGCACACTCTTTCATTTTTGACGCACtc gctaaaattgaaaaacaatgcGAGAAATCAGTACTTGAAGCAACAACGAA TCCACCTGCAAGAAGGAAACCTTCGGTAGCCGGCTATTTCTTTAGTAAGT ATTTTGTGGGCGAGGTTTTCTTAGGATACACGACATTTTGAGTGATATTC TATGCTATTTTGAcaaggaaatatttaacttaTCAAGGTGAATCTTATTA TTATGGTGCATTTGTGGAGCATCATGGGAAAGAAGTTGGCCTTGGACTTG CTATGCATCGTTCTGAGAAAAACATTGAACCAAGTTTCGAGGGATTGAAA GAGACAATAGAACAAGATATTGCAAACAATGTAATCAAAAGTCTGCTTTG TTATGATTACAATAAAAGAATGAGTCTAGACCAAGCACACTCTTTCATTT TTGACGCACtcgctaaaattgaaaaacaatgcGAGAAATCAGTACTTGAA GCAACAACGAATCCACCTGCAAGAAGGAAACCTTCGGTAGCCGGCTATTT CTTTAGTAAGTATTTTGTGGGCGAGGTTTTCTTAGGATACACGACATTTT GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000165_pilon | genome | sc0000165_pilon:636306..642109 + |
Properties
| Property Name | Value |
| Aaloc | 766-1176:5394 |
| Aaloc | 1-765:1 |
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