XLOC_038442 (mRNA) -

Overview
NameXLOC_038442
Unique NameXLOC_038442
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000013_pilon:1097877..1099061-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038442 ID=XLOC_038442|Name=XLOC_038442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1185bp|location=Sequence derived from alignment at sc0000013_pilon:1097877..1099061- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAACTCTCAACTTGCACTGGTTTTATGTTTGTCATTTTACAGCTG TAGTACTTATGCCAACGTCAATCACTTTTCTTATAAATTCTTGAGCCAAG AATCTAAAGGAAATGCTGGTAATATCATATTTTCACCAGCTAGTGTAATT GGTGCTTTAAATATTGTATTGGATGGTGCTAAAGGAGATACTAAGGACCA GTTGGAGATTGCTGTTGGTGGACAGGAGAGTTCCGGTGTACTAGATGGAT TGAAAAAAATCTCAAGACCTGAATCCAAAGACAACCAACCGTTAAAAATT GCTGAAAAAATCTGGGTTGATGACACGACAAAGGTTGTTGATATCTTTCA AAAGAAATATGAAAATGAAATCACTGAAGCTTCTTTCATCAAGAATTCTG AAGAGGTTCGTCAACAAATCAACGATTGGGTTGCCAAAAATGCTGATATT AAAGATCTTTTCAAGGAAGGTAGCATCGATAGTATGACGCGTCTTGTTTT GGTCAATGCAATCAATTTCAAAGGACTTTGGAAAACACCATTCGAAAAGC AATATACAAAGAAAAGTAAATTTATGCTTGAAGATGGCACGAAGAAGAAG ATTGATCTAATGTATCAAAACGGGAATTTCAAAATGGTATATGAAGATAG GTATGAGAGCGTCGAGGTGCCTTATAAAGGTGACGAATACAATCTATTGG TGACTATGCCAAGTAAAAAATCCACCAAAATTGATGACTTTATTGCACAG ATGAGTCAAGAAAAGATTCAACATATCTTTGATCGAATGCAGTTATTCAT GGATGGGAATAACATTGCACGCGGTGGGGATATTGAGTATAGTCAAGACA TCGATCTGTTTTTACCAAAATTCATGGCAAAAAGTGAGTTTGACTTGAAG AAAAGTCTCACTAAAATGGGAGTTGCTGATCTGTTTGAGCAAGGGAAAGC TGATTTGTCTGGAATCACTGGTGACCATAGCCTGTACGTCTCATCAGCTG TTCATCAGGCTAAAATTGAGATGGATGAGGAAGGAACAAAGGCTAGTGCT GCAACTGGTATTGGAATAGTGGCTATGTCTTTACCACCTCGTTTTGTGGT TAATCGTCCTTTCTTGTTCCACATTTTACACAAAGAGTCTGGAACTATCA TCTTCGCAGGCGTGGTCAAGGATTTGGGAGAGTAA

Coding sequence (CDS) from alignment at sc0000013_pilon:1097877..1099061-

>XLOC_038442 ID=XLOC_038442|Name=XLOC_038442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2370bp|location=Sequence derived from alignment at sc0000013_pilon:1097877..1099061- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAACTCTCAACTTGCACTGGTTTTATGTTTGTCATTTTACAGCTG
TAGTACTTATGCCAACGTCAATCACTTTTCTTATAAATTCTTGAGCCAAG
AATCTAAAGGAAATGCTGGTAATATCATATTTTCACCAGCTAGTGTAATT
GGTGCTTTAAATATTGTATTGGATGGTGCTAAAGGAGATACTAAGGACCA
GTTGGAGATTGCTGTTGGTGGACAGGAGAGTTCCGGTGTACTAGATGGAT
TGAAAAAAATCTCAAGACCTGAATCCAAAGACAACCAACCGTTAAAAATT
GCTGAAAAAATCTGGGTTGATGACACGACAAAGGTTGTTGATATCTTTCA
AAAGAAATATGAAAATGAAATCACTGAAGCTTCTTTCATCAAGAATTCTG
AAGAGGTTCGTCAACAAATCAACGATTGGGTTGCCAAAAATGCTGATATT
AAAGATCTTTTCAAGGAAGGTAGCATCGATAGTATGACGCGTCTTGTTTT
GGTCAATGCAATCAATTTCAAAGGACTTTGGAAAACACCATTCGAAAAGC
AATATACAAAGAAAAGTAAATTTATGCTTGAAGATGGCACGAAGAAGAAG
ATTGATCTAATGTATCAAAACGGGAATTTCAAAATGGTATATGAAGATAG
GTATGAGAGCGTCGAGGTGCCTTATAAAGGTGACGAATACAATCTATTGG
TGACTATGCCAAGTAAAAAATCCACCAAAATTGATGACTTTATTGCACAG
ATGAGTCAAGAAAAGATTCAACATATCTTTGATCGAATGCAGTTATTCAT
GGATGGGAATAACATTGCACGCGGTGGGGATATTGAGTATAGTCAAGACA
TCGATCTGTTTTTACCAAAATTCATGGCAAAAAGTGAGTTTGACTTGAAG
AAAAGTCTCACTAAAATGGGAGTTGCTGATCTGTTTGAGCAAGGGAAAGC
TGATTTGTCTGGAATCACTGGTGACCATAGCCTGTACGTCTCATCAGCTG
TTCATCAGGCTAAAATTGAGATGGATGAGGAAGGAACAAAGGCTAGTGCT
GCAACTGGTATTGGAATAGTGGCTATGTCTTTACCACCTCGTTTTGTGGT
TAATCGTCCTTTCTTGTTCCACATTTTACACAAAGAGTCTGGAACTATCA
TCTTCGCAGGCGTGGTCAAGGATTTGGGAGAGTAAATGTTGAACTCTCAA
CTTGCACTGGTTTTATGTTTGTCATTTTACAGCTGTAGTACTTATGCCAA
CGTCAATCACTTTTCTTATAAATTCTTGAGCCAAGAATCTAAAGGAAATG
CTGGTAATATCATATTTTCACCAGCTAGTGTAATTGGTGCTTTAAATATT
GTATTGGATGGTGCTAAAGGAGATACTAAGGACCAGTTGGAGATTGCTGT
TGGTGGACAGGAGAGTTCCGGTGTACTAGATGGATTGAAAAAAATCTCAA
GACCTGAATCCAAAGACAACCAACCGTTAAAAATTGCTGAAAAAATCTGG
GTTGATGACACGACAAAGGTTGTTGATATCTTTCAAAAGAAATATGAAAA
TGAAATCACTGAAGCTTCTTTCATCAAGAATTCTGAAGAGGTTCGTCAAC
AAATCAACGATTGGGTTGCCAAAAATGCTGATATTAAAGATCTTTTCAAG
GAAGGTAGCATCGATAGTATGACGCGTCTTGTTTTGGTCAATGCAATCAA
TTTCAAAGGACTTTGGAAAACACCATTCGAAAAGCAATATACAAAGAAAA
GTAAATTTATGCTTGAAGATGGCACGAAGAAGAAGATTGATCTAATGTAT
CAAAACGGGAATTTCAAAATGGTATATGAAGATAGGTATGAGAGCGTCGA
GGTGCCTTATAAAGGTGACGAATACAATCTATTGGTGACTATGCCAAGTA
AAAAATCCACCAAAATTGATGACTTTATTGCACAGATGAGTCAAGAAAAG
ATTCAACATATCTTTGATCGAATGCAGTTATTCATGGATGGGAATAACAT
TGCACGCGGTGGGGATATTGAGTATAGTCAAGACATCGATCTGTTTTTAC
CAAAATTCATGGCAAAAAGTGAGTTTGACTTGAAGAAAAGTCTCACTAAA
ATGGGAGTTGCTGATCTGTTTGAGCAAGGGAAAGCTGATTTGTCTGGAAT
CACTGGTGACCATAGCCTGTACGTCTCATCAGCTGTTCATCAGGCTAAAA
TTGAGATGGATGAGGAAGGAACAAAGGCTAGTGCTGCAACTGGTATTGGA
ATAGTGGCTATGTCTTTACCACCTCGTTTTGTGGTTAATCGTCCTTTCTT
GTTCCACATTTTACACAAAGAGTCTGGAACTATCATCTTCGCAGGCGTGG
TCAAGGATTTGGGAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038442XLOC_038442-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000013_pilongenomesc0000013_pilon:1097877..1099061 -
Properties
Property NameValue
Aaloc1-1185:1186