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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:142107..145885+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038811 ID=XLOC_038811|Name=XLOC_038811|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3779bp|location=Sequence derived from alignment at sc0000117_pilon:142107..145885+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGGTGGCTGGCTTAGTTTCCAAAAAGACCATGAATCTACCGAAGATGT
CAAAAAATATTGCCAATCTATCATTTTTGTACGATTTTATGGACAGACGA
ACAGTATGGTAaggctacacgctttttttataagaaccatgcttttccat
ttcatcatggatactCTTAATTTTTGAGGGGAAAATTATCCTAAATTACG
GTATTCTTGGATTAGGATTCAAATTTAACTTCAATTTAACATGAAATACA
TAGCTGAAGCATAAACTGGCACTTTTGTGAAAGCCTTGAGCTTTATAGAT
GGGTAATTGGCGATTAAcagttaaaaatgctctaaaaactaaaaatggca
ttcttaggttccatgatggtgatattcttacatactatattcttaaattt
ttcgcCAATTTCACTATAAATATTctgagtatattcttataaaaagagtg
cGTGTATTTAATGAAATAAccattaaagtctattcacgataagtgtgcac
tcttttttcttttacctataacttttgaaggaattctttaatatttataa
atttggtatcattggaaagatattagtgagtggaacaatttgaaataaaa
aaatctttagaaaagttctaaaaatgaagatgaaaatgaagaagaaaaat
ataaaaatcttgtagaaaagtgctatgactataattttcactgaagtgaa
ttcttaattgtcgaacgtcatcactgtgaaaaaatttctcaaaaataatc
attcaatcaaaagatatcaaacaaagttataagctgattgacgtcaaaaa
acgatgttttctgctgttttttagggtcaatcacttattaactttgtatc
ataactttatcttgaataaatattttagtgaaatttcttcccagtgatga
cctcctaagatcaaagaatctctccagcgaaaatgaaagttatactgtag
cacttttctacaagatcttcatttttttcttctttattttcatcttcgtt
tttagaatttttttcaaaacttttttatttcaaattgttccactcacaaa
tatctctccaacgataccaaatttataaaaattgaagatttccTTCAAag
gttataggtaaaagaaaaaagagtgcacacttatcatgaacagactttag
ataggaaaagaaacttttggtcaattcaaaattttaagccaCTCTTTCTC
Gatcaataatttttgaattagctattttttccaactaattttgttaagaa
aaaaatttccttcgcAAAGCAAAATCCTTTAATTGTGTAGCCTAAATtct
taaatattcttaaataGCTTTTGATAAAGTAGCCGCTCGTTAAAATTTGT
ATTCACTTCCTCTAAAAACTAGTTGACACGACATGAGGTAATATACCTTA
AGAACTTTTCTCGAGGTGGAGAAAACTTTTACTTATTGGTAATTTGGAAT
TTTAGATGCTACCAAGGACCATGTTTATTAGCGAGTgcctcactaaaaac
cgagaTTTTTTATCCCGTtgattgcgtagaaaaaacgcgggtgacgtcta
gtataggctacatGTTTATCAGAATATTTTCGTTTATAGAAATCACACGA
AATGGACCGCGATGATGTCGATGCTGGAGGAAGGGAGAAATCTAGCCTTG
GTATTATTCTGAATGAGCTAGACCGTGAGATCAAAATGGCTCCAACAGTT
GCCGAATTCGAAATGACGGAACCAATGAAAGCATTGTTGAAGAAGTTGGC
AGTCATTAGAGTTTGCACAAAAGAATGTGAGAATGAAGAAGATTGCCTTA
AAAGGCTTTTGGaagattcaaaacattttgagaaGATTTATCGCGAAAGG
GGTCGTAAGTATTCTTCTTTTCAAACAAGATTATACAAATTGtgtctcca
taacttgaacatgCGCAGAGGGAACAAGAATTTATGCgttcgaaattttg
aattatcgAGTAAGGTTAataaagcattgttaactgaagggacaagaaaa
cttgtttgagttaagggaTAGTACTTAAAAAACGACAGTTTTCTTcctgt
tttattcaaaatactttaataaaATACCATAACTTTGTATCGGGGGATAA
AGTCGTCTTTGACGACGGTTGAGATGGCTATCGAAGTATATTATGTTGTC
TTAAATGAAGCTGAtgaatgaaaaagtgaaaagtccTCTTTGACGACGTC
TTGGACAATGAGAGAATAATAGACCTTCATAGCAGTTTTGGAGTACTTTC
TGTAAATTCTAGCGGTTAGAGGAAAAGGAGACAATGGAATTGGAAAAGaa
gttttttatctttataGACAAATCAGAGAATCTGCATGATGACCATGACT
TCTATTGGGGAACGCGACAGCAAATGTTGTTTGGCAAAGTGATCGTTGAT
TGGTTACCTGAACACATCGAGACAAAAACTCCACCTATGGATCCTATTTT
TGGAGTTCTGTTGAACCCTACTGGAGGTTTgtatattgggctcttccaaa
aaGTTTTCGTACATGAGGAGTGGATGATAGAGTTTcctaaaatctacaaa
atttgccttgtccgaggggggggggtaacttTAATCattttgagggtaat
tttgactGTCAAGGGGGTCAAgaaatgcttgtccggggggtaaatttcca
aaataattttatatcctccaccccccccatatatttaaatattttctgga
aaagcccattctcatttttgtcatattttttttgattccaTCTTCCCAAA
CTCGAACTAAAAAAGTCTCTTAGCTATGGtatttttcatgattctgatag
cgctcacgattGTTCATGTTCATCAGgtatataagaatatttataagaac
aattttagaaaaacaacgaGGCTCGaaaaaaaaccccaaaaatagaaaat
tttaagaacattgttgAGCCAAGAataactacaatcatggtcgtaatatt
tgagaaaaaagggaaatccaccagGAAGTTTTGAATAATAACcgcaatcg
atttgtaagtgctctaaagtaggttggaagggtagagttttaactctgag
ttttaacatgagacttaagactgaggatcgaaatgttcaaaaatggtcca
ttaaggctcataatatagcctggaggtctataaacccgagccaaattgat
agatggcccaaaatcggcTTTCTcacccgaactccaaatttcgaaaaacg
agaaaataagcttaattctcaatagatttcgaccatgattgtaaatGCTT
AGTAAATTATCACATTAGAATAGACCTCAATCCTATCTATTAAAAACCAG
AACAGGCCAATTGATGCTCATACCacgaaaacaataaaaaataaccgagc
ctgaaaaaaattaccttatcggccctttttacaccggtcCTTATTACgtc
acgagcccaaaaataccGCCAATaaaggccggtgtaaaaagTGCCGATAA
GATatactgattcttataaagaagttTAAAATTTAGTTCTCATTCTTGGT
ATTTATTAAGGGCTTGTTGGGCCAGGTGATTTAAAATGGATGCACGATTC
TTTATTCGACGATTTGGGACCTTTTGCATATCATTCAGCTGTTCATGATG
CTTTCGgatatttgaaaacaaaccataATTCTGGTCCTGGATATTGTTAT
TTGAACAAAGGAATTTTTGGTGATTGGAGTCCATTTGGTGGACAATTATT
TGGCTTGAGGTATTGGAATGGGCTTTTGGGTGAAGCCCAACCAGAAGAAG
CAAAGGCAGATCAGTTTGTGTTCAAATAA Coding sequence (CDS) from alignment at sc0000117_pilon:142107..145885+ >XLOC_038811 ID=XLOC_038811|Name=XLOC_038811|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1602bp|location=Sequence derived from alignment at sc0000117_pilon:142107..145885+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGGTGGCTGGCTTAGTTTCCAAAAAGACCATGAATCTACCGAAGATGT
CAAAAAATATTGCCAATCTATCATTTTTGTACGATTTTATGGACAGACGA
ACAGTATGatgGGTGGCTGGCTTAGTTTCCAAAAAGACCATGAATCTACC
GAAGATGTCAAAAAATATTGCCAATCTATCATTTTTGTACGATTTTATGG
ACAGACGAACAGTATGAAATCACACGAAATGGACCGCGATGATGTCGATG
CTGGAGGAAGGGAGAAATCTAGCCTTGGTATTATTCTGAATGAGCTAGAC
CGTGAGATCAAAATGGCTCCAACAGTTGCCGAATTCGAAATGACGGAACC
AATGAAAGCATTGTTGAAGAAGTTGGCAGTCATTAGAGTTTGCACAAAAG
AATGTGAGAATGAAGAAGATTGCCTTAAAAGGCTTTTGGaagattcaaaa
cattttgagaaGATTTATCGCGAAAGGGGTCAAATCACACGAAATGGACC
GCGATGATGTCGATGCTGGAGGAAGGGAGAAATCTAGCCTTGGTATTATT
CTGAATGAGCTAGACCGTGAGATCAAAATGGCTCCAACAGTTGCCGAATT
CGAAATGACGGAACCAATGAAAGCATTGTTGAAGAAGTTGGCAGTCATTA
GAGTTTGCACAAAAGAATGTGAGAATGAAGAAGATTGCCTTAAAAGGCTT
TTGGaagattcaaaacattttgagaaGATTTATCGCGAAAGGGGTCACAA
ATCAGAGAATCTGCATGATGACCATGACTTCTATTGGGGAACGCGACAGC
AAATGTTGTTTGGCAAAGTGATCGTTGATTGGTTACCTGAACACATCGAG
ACAAAAACTCCACCTATGGATCCTATTTTTGGAGTTCTGTTGAACCCTAC
TGGAGACAAATCAGAGAATCTGCATGATGACCATGACTTCTATTGGGGAA
CGCGACAGCAAATGTTGTTTGGCAAAGTGATCGTTGATTGGTTACCTGAA
CACATCGAGACAAAAACTCCACCTATGGATCCTATTTTTGGAGTTCTGTT
GAACCCTACTGGAGGGCTTGTTGGGCCAGGTGATTTAAAATGGATGCACG
ATTCTTTATTCGACGATTTGGGACCTTTTGCATATCATTCAGCTGTTCAT
GATGCTTTCGgatatttgaaaacaaaccataATTCTGGTCCTGGATATTG
TTATTTGAACAAAGGAATTTTTGGTGATTGGAGTCCATTTGGTGGACAAT
TATTTGGCTTGAGGTATTGGAATGGGCTTTTGGGTGAAGCCCAACCAGAA
GAAGCAAAGGCAGATCAGTTTGTGTTCAAATAAGGCTTGTTGGGCCAGGT
GATTTAAAATGGATGCACGATTCTTTATTCGACGATTTGGGACCTTTTGC
ATATCATTCAGCTGTTCATGATGCTTTCGgatatttgaaaacaaaccata
ATTCTGGTCCTGGATATTGTTATTTGAACAAAGGAATTTTTGGTGATTGG
AGTCCATTTGGTGGACAATTATTTGGCTTGAGGTATTGGAATGGGCTTTT
GGGTGAAGCCCAACCAGAAGAAGCAAAGGCAGATCAGTTTGTGTTCAAAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:142107..145885 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 535-801:3513 |
| Aaloc | 376-531:2320 |
| Aaloc | 109-372:1590 |
| Aaloc | 1-108:1 |
|
