|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:280830..283598+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041294 ID=XLOC_041294|Name=XLOC_041294|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2769bp|location=Sequence derived from alignment at sc0000043_pilon:280830..283598+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCGTGGACAAGATGATATTGTTCTTGGCcacttttttgctgatttt
agCAACTAGCGAGGTAAGATAGGCTCAATATATagtgtttctttaaaaaa
aaattcattttttttttattttcttgtgttGTGCTGATTTGTCGGTTTGT
CACTTTTCTTCTTGTCACGTGAGTTggtgatatgatttcttttgatctta
attagctttttcagatctTTTACTTTTGAGATTTGTCAACACAATGTTTT
GTAACTAATACCTTAAGTAGTTTTTTCGTAAGAGGCTCATTTTCTAGTCT
ACACAAAGGACAGCCCTAGGTTTTTAGGCCTGAGTAGGTGTTTTGTATCT
AACTTAAGTAGTTTTTTCGCAAGAGATTGGTTTTCTAGCACTCTTTAAGT
CCCTGACAATGAGTTTGGATTGTAATTATGTACATTTTACTGTAAGTTAT
TGTATTCAAAATAGCCGAGCAAGCAAACAATTCTCGTGTTAAATGTAATA
CTTTTAAAGTCACTCTCGTTTATACTTGACAAAGACTAACGTTATTAACt
accattcaaaatttttggatagaATGTCTCAAATTCTAAGGAGTGTTGTA
TACATTTTGACCGAGAAAGAAAAGTTAGAACAGATCCAATGTGAAGTAAA
TCCTTTAAACTTGTCATCTCATTCGAGTATAGAATGACTGAAAGAAAAAG
CTAACTTCTTTGTTTAAGTAATAGATATTGAATTCCCAAAGATAAAAGTC
GCTTTTCGTACAAGAATTATGTTTTGCTTTTATTGTGTTCCGGACACACT
ATATATCTCAAGTTCTGTATGCAATCTTAAATAGCAATAAACGTATCTGT
ATTGTAACTGTTTTGGAAATATTGCTGCCTGTTGAATGAAAATACTTTAT
ACGTGATCCATATAAATAATGCTTAGCCATAAAATCAActagatattttt
ctttcatttattttagGGCATGCGCTCTCACCCACCCGCTGACGGGACTT
TCCTTCCGGAAATTCTCAACCAAAAAGAGGTTTCACAACTTAAATTAATG
GCTCCGGAAAACTTCAATCACTCTTCTGAATATCTGGAAACTCAATCCAA
ATTACGTTTGTCATTCCAAAACATCATCGAATACTTTATTCGCGAAAATA
TCGATTCGATGCGATTACTTGAGAACGGGCAGCgtaaaatgaaattaatt
aaagAGATCAATGTCCTCACACTCGAATTCTCCGCTCTTATTGACCGTTA
TTTTGGCGACGGTTTACCGCTATGGCAACGAGAGGTCCTTAGAGACCAGA
TGGATAAAACGAGTGATCATATCTTATCTCTTTATCAATCGCTACAGAAT
CATTATGATGATAGTTACCACACCCTTATCGAACAAACTCAACCCAAACG
TACTGACGGCGTTCTTATTCAAGGTGTTTATATCACGGATCCAGCATTTA
TTAAACTTCGCCTTGAGGTGGAGGAATTACGGCGTAAAGACCTTCCAGTG
GCGCAAGACGTTCTGGATGAACTGCACTCGATGGTGACTGAACTGGTTGA
CCGTGAGAAATCTTCTTTGGAGAATTTGAAATTCGATTATGTGTTTCAAT
GGAATCGCATCATTGAAGAACGTGCCAAATCCAAAACAAGCGATGCTGAC
GTATTCCGAAATGAATTTGTTTTCAGATTCAAACAGTTAGAAAGAACGGA
ACTAGCTGTTTTATTCTCTGTCAAGAAAAGTGCATTGCTTGCACAAATAG
ACGAACTATTGGTCATTGGtgaaaaacacaaacaaaacgtgattgacatt
caaaaagatttatcagataagaaaatcatcatcatcgGTCAATCTGCTAA
AAGTGTTGTCTCCTTATTCCAACAAATTTACGATTCTAAAATCAAGAACC
CGATCTTCGAAACCAAGCTTCGTAATGCTGTCGATAAAATTACTTACTCG
CTAAAGAAGgaatcgaaaaaatcaaaaattaagagTAAACACATGTCGAA
ATGGAATAAATATTTCGAACATACGATGAACGGTCGTTATGAAGCAGCCC
GCAAGGCTGAGAAACGCTCTTTGAAATTACTTAGAAAATTATTGGAAGCA
AAGCACATTCAAAATAAGAACGCCCgtaacaaaaaaaggaaaatggcATC
ACCTCCCTCGACAAGAAAATCAGGATCCAATCAACATGTGAAATCTAAAG
CAATTGGCAACTCCAAATCTGGCAATCCGAAATTTTCCACAAAGACCGAC
ACCGAATCTAAATCTTTCACCGGAATGCTTGCCAAGCTTTATGATGAAGC
TTTAGAATTGAGTTGGACTGCTTTCACAAATACCTTAGATCTCATCCCTG
ATTCGGAGTTTGCTAACGAAGTGATTATAGCAACATTCTCAACCATCAAA
ACCGTTTCCAGAGCAACAGCAAAAGCTTTTGATGACACAGTTGAAATGGC
GGCTAACGGACTTCACTCGACAAACGAATATGCTTTAAAGGTTTATCATG
CGGCTATGGAAAATGCTCAAACCTTTTACGGTCACGGCGTTAACGCCCTC
AGCGTAACAGCAGACAAGGGTGTTTCTGGATTCTGGTGGGCGTGTCAACA
AATGGACGAAACATTAGACACCTTGGACTCGATTCATGATATTTTACATG
AACTCACAAAACAAACCGTTTACAGTGGCCTGGAAAACGCAAAcgaattt
cttcaaattttgtcaaCTGGTACACAACGAATTCTCGATGGAGTTTACGA
CTACTTTTCTCTTCAATGA Coding sequence (CDS) from alignment at sc0000043_pilon:280830..283598+ >XLOC_041294 ID=XLOC_041294|Name=XLOC_041294|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3732bp|location=Sequence derived from alignment at sc0000043_pilon:280830..283598+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCGTGGACAAGATGATATTGTTCTTGGCcacttttttgctgatttt
agCAACTAGCGAGATGCTCGTGGACAAGATGATATTGTTCTTGGCcactt
ttttgctgattttagCAACTAGCGAGGGCATGCGCTCTCACCCACCCGCT
GACGGGACTTTCCTTCCGGAAATTCTCAACCAAAAAGAGGTTTCACAACT
TAAATTAATGGCTCCGGAAAACTTCAATCACTCTTCTGAATATCTGGAAA
CTCAATCCAAATTACGTTTGTCATTCCAAAACATCATCGAATACTTTATT
CGCGAAAATATCGATTCGATGCGATTACTTGAGAACGGGCAGCgtaaaat
gaaattaattaaagAGATCAATGTCCTCACACTCGAATTCTCCGCTCTTA
TTGACCGTTATTTTGGCGACGGTTTACCGCTATGGCAACGAGAGGTCCTT
AGAGACCAGATGGATAAAACGAGTGATCATATCTTATCTCTTTATCAATC
GCTACAGAATCATTATGATGATAGTTACCACACCCTTATCGAACAAACTC
AACCCAAACGTACTGACGGCGTTCTTATTCAAGGTGTTTATATCACGGAT
CCAGCATTTATTAAACTTCGCCTTGAGGTGGAGGAATTACGGCGTAAAGA
CCTTCCAGTGGCGCAAGACGTTCTGGATGAACTGCACTCGATGGTGACTG
AACTGGTTGACCGTGAGAAATCTTCTTTGGAGAATTTGAAATTCGATTAT
GTGTTTCAATGGAATCGCATCATTGAAGAACGTGCCAAATCCAAAACAAG
CGATGCTGACGTATTCCGAAATGAATTTGTTTTCAGATTCAAACAGTTAG
AAAGAACGGAACTAGCTGTTTTATTCTCTGTCAAGAAAAGTGCATTGCTT
GCACAAATAGACGAACTATTGGTCATTGGtgaaaaacacaaacaaaacgt
gattgacattcaaaaagatttatcagataagaaaatcatcatcatcgGTC
AATCTGCTAAAAGTGTTGTCTCCTTATTCCAACAAATTTACGATTCTAAA
ATCAAGAACCCGATCTTCGAAACCAAGCTTCGTAATGCTGTCGATAAAAT
TACTTACTCGCTAAAGAAGgaatcgaaaaaatcaaaaattaagagTAAAC
ACATGTCGAAATGGAATAAATATTTCGAACATACGATGAACGGTCGTTAT
GAAGCAGCCCGCAAGGCTGAGAAACGCTCTTTGAAATTACTTAGAAAATT
ATTGGAAGCAAAGCACATTCAAAATAAGAACGCCCgtaacaaaaaaagga
aaatggcATCACCTCCCTCGACAAGAAAATCAGGATCCAATCAACATGTG
AAATCTAAAGCAATTGGCAACTCCAAATCTGGCAATCCGAAATTTTCCAC
AAAGACCGACACCGAATCTAAATCTTTCACCGGAATGCTTGCCAAGCTTT
ATGATGAAGCTTTAGAATTGAGTTGGACTGCTTTCACAAATACCTTAGAT
CTCATCCCTGATTCGGAGTTTGCTAACGAAGTGATTATAGCAACATTCTC
AACCATCAAAACCGTTTCCAGAGCAACAGCAAAAGCTTTTGATGACACAG
TTGAAATGGCGGCTAACGGACTTCACTCGACAAACGAATATGCTTTAAAG
GTTTATCATGCGGCTATGGAAAATGCTCAAACCTTTTACGGTCACGGCGT
TAACGCCCTCAGCGTAACAGCAGACAAGGGTGTTTCTGGATTCTGGTGGG
CGTGTCAACAAATGGACGAAACATTAGACACCTTGGACTCGATTCATGAT
ATTTTACATGAACTCACAAAACAAACCGTTTACAGTGGCCTGGAAAACGC
AAAcgaatttcttcaaattttgtcaaCTGGTACACAACGAATTCTCGATG
GAGTTTACGACTACTTTTCTCTTCAATGAGGCATGCGCTCTCACCCACCC
GCTGACGGGACTTTCCTTCCGGAAATTCTCAACCAAAAAGAGGTTTCACA
ACTTAAATTAATGGCTCCGGAAAACTTCAATCACTCTTCTGAATATCTGG
AAACTCAATCCAAATTACGTTTGTCATTCCAAAACATCATCGAATACTTT
ATTCGCGAAAATATCGATTCGATGCGATTACTTGAGAACGGGCAGCgtaa
aatgaaattaattaaagAGATCAATGTCCTCACACTCGAATTCTCCGCTC
TTATTGACCGTTATTTTGGCGACGGTTTACCGCTATGGCAACGAGAGGTC
CTTAGAGACCAGATGGATAAAACGAGTGATCATATCTTATCTCTTTATCA
ATCGCTACAGAATCATTATGATGATAGTTACCACACCCTTATCGAACAAA
CTCAACCCAAACGTACTGACGGCGTTCTTATTCAAGGTGTTTATATCACG
GATCCAGCATTTATTAAACTTCGCCTTGAGGTGGAGGAATTACGGCGTAA
AGACCTTCCAGTGGCGCAAGACGTTCTGGATGAACTGCACTCGATGGTGA
CTGAACTGGTTGACCGTGAGAAATCTTCTTTGGAGAATTTGAAATTCGAT
TATGTGTTTCAATGGAATCGCATCATTGAAGAACGTGCCAAATCCAAAAC
AAGCGATGCTGACGTATTCCGAAATGAATTTGTTTTCAGATTCAAACAGT
TAGAAAGAACGGAACTAGCTGTTTTATTCTCTGTCAAGAAAAGTGCATTG
CTTGCACAAATAGACGAACTATTGGTCATTGGtgaaaaacacaaacaaaa
cgtgattgacattcaaaaagatttatcagataagaaaatcatcatcatcg
GTCAATCTGCTAAAAGTGTTGTCTCCTTATTCCAACAAATTTACGATTCT
AAAATCAAGAACCCGATCTTCGAAACCAAGCTTCGTAATGCTGTCGATAA
AATTACTTACTCGCTAAAGAAGgaatcgaaaaaatcaaaaattaagagTA
AACACATGTCGAAATGGAATAAATATTTCGAACATACGATGAACGGTCGT
TATGAAGCAGCCCGCAAGGCTGAGAAACGCTCTTTGAAATTACTTAGAAA
ATTATTGGAAGCAAAGCACATTCAAAATAAGAACGCCCgtaacaaaaaaa
ggaaaatggcATCACCTCCCTCGACAAGAAAATCAGGATCCAATCAACAT
GTGAAATCTAAAGCAATTGGCAACTCCAAATCTGGCAATCCGAAATTTTC
CACAAAGACCGACACCGAATCTAAATCTTTCACCGGAATGCTTGCCAAGC
TTTATGATGAAGCTTTAGAATTGAGTTGGACTGCTTTCACAAATACCTTA
GATCTCATCCCTGATTCGGAGTTTGCTAACGAAGTGATTATAGCAACATT
CTCAACCATCAAAACCGTTTCCAGAGCAACAGCAAAAGCTTTTGATGACA
CAGTTGAAATGGCGGCTAACGGACTTCACTCGACAAACGAATATGCTTTA
AAGGTTTATCATGCGGCTATGGAAAATGCTCAAACCTTTTACGGTCACGG
CGTTAACGCCCTCAGCGTAACAGCAGACAAGGGTGTTTCTGGATTCTGGT
GGGCGTGTCAACAAATGGACGAAACATTAGACACCTTGGACTCGATTCAT
GATATTTTACATGAACTCACAAAACAAACCGTTTACAGTGGCCTGGAAAA
CGCAAAcgaatttcttcaaattttgtcaaCTGGTACACAACGAATTCTCG
ATGGAGTTTACGACTACTTTTCTCTTCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:280830..283598 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 64-1866:967 |
| Aaloc | 1-63:1 |
|
