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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1739278..1742542+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043197 ID=XLOC_043197|Name=XLOC_043197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3265bp|location=Sequence derived from alignment at sc0000049_pilon:1739278..1742542+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAAAATTGTGTCCGCAAACTTTTGTATGTTTTTGAATCGATACcttt
agaaaaagaaagaaatttagtTTCACTAATCTATTGTCCATCGGTAATAC
TGTTAGAGCAGTAGGGTTTTGAGATgtagtttggaaaaaaaactgaaaat
taccatcaGGTTGGGTAAGGGGTCAATTTAGACTTCAAAGATTTGAGatt
gagataaaatttgctgAATCGTTATGGCGAAACATCACAAGAGTTTACCT
CCTTTGCAAACTGAAAGCAAGCTCATCATCCTCAAGCAGTTCAGATAGGG
GCTCTAAAATAGAAGAAAACAATTATATGGGCAACAAGAAAGGGGTAGCC
TTCAAAGACGTAACGTATGCACAGCGTCAGTCCAGGTTCAGCCCCAAAAA
AGAGCTCCCTTCCTTGAAATTTAGGTCTCCCCAAATAGTCGAGGATTCAA
CAGAAGCCCCCAATACCTATCTGAATAATTTATCATTGTAATATTAAAAA
GAAGAATGATTTCTGCATTTTTGTCATTCTCCAAATCATGATTGTTTTTG
GAGTGGATTAAGCCTATTACTTACTTAATTAAAAAATCCTGGCTTAGTAA
ATCAGCTAGGCACACTCATGCTAACTCATGACACGTAAACGTAATTTCTG
CACTCATTACAAGAAATTTGAGTGAAAAAGAGGGATGAAGGAGTTGGGCG
CAGTTAAAACACAATAGAAAAATCACCATATTCCTTCAAAGGACTGAGTA
GTGTCTACATGTGTTGCATTTGATAATTATattgaaatatcaattttgaa
tatttgatTACATGCATGTAAAGCCATTATTAAGTGAGCCTTGCAAAATc
aaggaattttttaaattcttaaacaaaataaaaccttaaGTTTTAGGACA
ACAGCAAAACAAATGTGAGGTTCACTAACAACAACATACCTGTCTCTGTA
TGCACGTTTCAACAAAATTCAACGAATCTTTATATTGCGTGTCCTCAAAC
ATTGcttaaaaaatgtgaaaaaagtaataacttaTCGATGACAAAAACCT
CAGAATTTCGACATGATAAATTACAGTTGATTATctcttattcaattttc
aagggatcgagaattttcttcgaattagagaaacatttgaattacagaga
gaataCACTATACATTCTATCCAGGGGATGCTATTCTTCATGTATCTATC
ATCGCATATTTCTTACAATTTCTAATACACCTTTAAACCTATAAACCTGT
GCAGTTAGCTTTTGAGAAGTCTGGTAACGAAACTACAAGAAAAATTCTTC
TCGACGACGATATCCAAAACACAAGTGCAGGAGTGCTGTTGTGAAAAATG
TAATAAGCGATCAAGCAGCGTCAATATAGTTAAGCTATTCGAATGCTGAA
CACTCGGGAAACTTTCTCTAGAGTTTTGGCGGAAATtagcttgttttgat
ttatttggaACCTTAAAGTGCCATGCGTCGAGAAAAAATCTTCCtagtaa
attcattaccagacCCCTAAAAAGCTCATCCCGCCGCCAAGCGTTGCACC
TATCAATCCTTGGAAGCACAAGGAAATGATATCAAAATTCTGCCACTAAG
GCGAGTAAAGAGTAAAGAAATACCTTGCTCGATAGCCAATACATCTTCAA
AGCTTCCAtccgttttcttcttcatgatGGCCTCACATGCGCCAATGTCT
GACAAAAAGAATGGAATCTTAATAAGATGAAGTTGCCTCTCAAcatgaaa
ttttcagtttggtgGTAGTTTGTAGTTTGTAGTTTGAGAAGTTTCAAATC
AATACCATCTGTTGGAAACAGCCGTGCTTATAAAAGGCATTTCCCAGTAC
ACACAAAGTTTATATTAAACTTGGATATCTTACGTAGTGCTAATGATTTG
TGTTGCGATTTCAACTCTTTCAAATCTTCCGAAACAAATTGCTTGAAGTC
AGACACCGAAGAtaaattatcttttttctaaaaggaaaaaaaaaacattt
ttggtaaACTTTGCGCTTCGAAAATAATCTACTTGTTTCATTCTGAATGT
TCTACTACTATAAAACCATGGGGATTAACGCTAAAGCAAAGtaaaagtga
aataaaattaAATGGAAATTCATACATCATATCCACTCTGCAGTTGTCTT
GCTTTTGAACTCAACAATGGAAATACTCCTGTGATATGCATCCCTCGAAT
CTCagcaaaaacctaaaaatattcaataaagtatatgaaataaaatgttA
TGCGAAGACTTAGAGGCATAGTGAAATTCGAATTAACACCGggaataaat
tcaaaaaaacttgatagtacaggcccggcggaaacggggagactggggac
acttcagcctctccacttttGAGTAAATTTTTCTCAAGTTTCTAGcgaat
ttcatctcattttgagctttcagcctccccacttttacggttgttccgcc
ggacCTGTAACACCGTTTTTTGGGGAATATTAATTCATTGTTTCCTACAG
AGTaaagggaaaagggataacaagaaagaaaaagcaaaagggccaaaaac
aagCAGTGTTTCTTTTAACGAATTAGGTACAAAACAATCGAAAATTCTCG
GAAACTTTATATAATAAATTTAAAACATACTTGATAGATGCAAGAAAAGA
TTCAACTGCTAAATTCAAGCGGAAAAAGACTAAATTTCATGCTAATTAAA
AaatgagcttcggaaagttTAGCCAGTTTCCGTATTAAATACCAGCTGTT
TTCCGTGTCAACCTCTAGAAACACGCTTTACTATTTCAGCCGGCTATCCC
GGAAGAAATGGCGGGAATAACCCGGAAAAACAAGTGGAATCCTACTCCGG
AAAGTGGAACCTTATCCAGAACGACGGCATCAGTCATAAATTCGTTATTT
CTTACCGAGAAGGCAAAAATTTAGACTCACTcgggaatagaccttttcat
aaattacgtcacgaacaacacttgccttgttttgaaattattcccATGGT
GATTAACCTCCCAGTTTTATAACTTAAcaactttctattcataaaaaaat
tattttatgtctcaagggacataatcactaCAGTAATTATTTggatacga
ggcaagtgatgttcgtgacgtaatttatgaacaGGTACTTAACCCTTTTC
AAGAATGAATCTATAGtttgacaaaattttctttcttaccTTATCCGTAG
AATTCAAGCTCAAAGTTAAAGGTGCATCTTGGCTTGTGACGTTCTTCTCG
AATTTAACAACACCT Coding sequence (CDS) from alignment at sc0000049_pilon:1739278..1742542+ >XLOC_043197 ID=XLOC_043197|Name=XLOC_043197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=972bp|location=Sequence derived from alignment at sc0000049_pilon:1739278..1742542+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAAAATTGTGTCCGCAAACTTTTGTATGTTTTTGAATCGATACcttt
agaaaaaTGTAAAAATTGTGTCCGCAAACTTTTGTATGTTTTTGAATCGA
TACctttagaaaaaACTGAAAGCAAGCTCATCATCCTCAAGCAGACTGAA
AGCAAGCTCATCATCCTCAAGCAGACCTGTCTCTGTATGCACGTTTCAAC
AAAATTCAACGAATCTTTATATTGCGTGTCCTCAAACATTGcttaaaaaa
tACCTGTCTCTGTATGCACGTTTCAACAAAATTCAACGAATCTTTATATT
GCGTGTCCTCAAACATTGcttaaaaaatAGCCAATACATCTTCAAAGCTT
CCAtccgttttcttcttcatgatGGCCTCACATGCGCCAATGTAGCCAAT
ACATCTTCAAAGCTTCCAtccgttttcttcttcatgatGGCCTCACATGC
GCCAATGTGTAGTGCTAATGATTTGTGTTGCGATTTCAACTCTTTCAAAT
CTTCCGAAACAAATTGCTTGAAGTCAGACACCGAAGAtaaattatctttt
ttGTAGTGCTAATGATTTGTGTTGCGATTTCAACTCTTTCAAATCTTCCG
AAACAAATTGCTTGAAGTCAGACACCGAAGAtaaattatcttttttATCA
TATCCACTCTGCAGTTGTCTTGCTTTTGAACTCAACAATGGAAATACTCC
TGTGATATGCATCCCTCGAATCTCagcaaaaacATCATATCCACTCTGCA
GTTGTCTTGCTTTTGAACTCAACAATGGAAATACTCCTGTGATATGCATC
CCTCGAATCTCagcaaaaaccTTATCCGTAGAATTCAAGCTCAAAGTTAA
AGGTGCATCTTGGCTTGTGACGTTCTTCTCGAATTTAACAACACCTcTTA
TCCGTAGAATTCAAGCTCAAAGTTAAAGGTGCATCTTGGCTTGTGACGTT
CTTCTCGAATTTAACAACACCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1739278..1742542 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-486:3191 |
| Aaloc | 325-408:2127 |
| Aaloc | 232-321:1886 |
| Aaloc | 166-228:1635 |
| Aaloc | 88-162:938 |
| Aaloc | 58-87:260 |
| Aaloc | 1-57:1 |
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