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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000264_pilon:179217..182642+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014109 ID=XLOC_014109|Name=XLOC_014109|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3426bp|location=Sequence derived from alignment at sc0000264_pilon:179217..182642+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACATGGTTGATGCTTTTGCAATTTGCATTCTTCATAACGTTATC
TTTTTGTGGCAATGAATTGCACATCATCAATGAGAGGAGACcagaaaacc
aaaaacatttcaCCTCATCTatagacttttttacaaacaaagATAAAGGG
AATAGAGATTTCTGTAACAGTTTGAATGCAACTTGTGTCCATAAAGAAAT
TTGTGATAAATGTCGGTGTGACAAGGATTTCATATGGCTGGATTATACTC
AAGGATGCAAGGGTCAACAATATTTGTATAACATTACTAATGGTTTGTCC
AATTCTTTCGGTGAAATATGTTATATGTAACGCCTTTTGCTCGGGGAAAA
GGTTAAGGAActtgccgctggtcagggtctcTTTTTAAGCCTCATCTGTT
TCAGTCATATTTTCACCCATGGTTAGAACTTGATCAGAAAAATACCGGAC
TAGCGGACTCAAACTTGGACCCTTacaatgcagagaaaatttagcccccg
ggggggggggcactttttgattttgaaaacgaccgtacgttcggccaaaa
atcaagTCTCTAAAATCGGgtccttacagtgcagaaaaaatttggttgaa
aatggacccttacagtgcaatttttcgaatttttttgcccttttcagttt
tacctcaaaatttagtattttctcaaattttatacccttacagtgcactt
tttcccacttgctcacaaatcaacccttacagtgcactttccaaagtcta
aaaaacctaccattaagggccgcacgtccggtaggtcacttacctgaagt
gccccccccccagattTAGCCCCAAATTTGAATTGTGAAATCGTGCATTT
TGGGAATTAAAAGTCAAGTTTTAAATATCTGTCCATCTTAAATGGTAGAA
TATATCCATTAAAACAAGTCGTTAAAAGTGTGCTAGCGAGACTTATCTTG
TTTTTagttctgatttttttcatcggCTGCACTTCCTGTATTTAATCAAG
GTCGAACACTTCACTCAGTAAATTCTTTATCAAACAAAACaccgatacac
gttttttataagaaaaaactatataagaacataaggcttcgatggccaaa
atgttaagaacaagttaagaacattttaaggctgtacagactctaaaaca
cccgatttcttaggaaaatggacaaaaatgctcaaaaaatggcgaaaatt
agaacttcttaaaacatttttaggtttaaaactccaaaagttaagaTCAT
CcgtaggcttcaaaaatgttggatgttcttataaaaaacaccgATGTTTA
GAACGTGAATAGTCTTGCAAAATAGTTGTGGCCACTTATTCATAATAGCC
TTTccatccatttttcttttaacccTTCGAAATCCTAAAGGTCGATTTAA
AACAATGCAGTGCTGATGAGATTATTTGGAGATAAAGGTAATCCATGAAt
agcaaaacattttttcattaaattataATGCAATTACACTGCCACTGATC
TATCTTTATAAGCATATTGAAATCAAAGTTTATATGGTAATTTAcatcag
atgagatggagtttttataagatactttaataattggtcatttgaagtaa
tgaaaatgacgcgttctttagaaaatgtaacaaaattgttttattactgg
ttaacgaccaagcaaatcaaataagagctttaaaaactccatctcgtccc
attTACATGTTGTCTTCATAAATTCAGTAAAACTTGactattttaccaaa
atttaaatTCGACTGCgttaaaacacccccttctcacaaacccagtagga
ttttttcagccagtggaggTAAAAGTAAAAGACCTAAACTCGACGGGGAT
TGATAtttacatgtttcttttatggCTGGGCATTTGAATTCTATACTTtc
cgagccagaaaattcagtgggatgaaaaaaataaaacaatattttcagTG
AAGATTTGGTTATCTAATTATTCACTGCTGAGACAAAAATTATAGTATAA
TTTACCACTGGGGACGGTATTATGGCCATTTTCTCCAGTGGGAAAGGGTC
CCAGTGGATCTGTGTGAAGGGTTATGTTAACCTATCCCAAACTTAAATCT
GTGTGTAAATGACTCACGACTTTTGTGCCTTTAAATGATTTGCGACATGG
TTAAAGTGCCAGGACAAGCATTATTATGATCTTCTTTGATCCGTTGGaag
taagggggggggggggggtaaaatcCTTGGGATAGTTTTTCTGTACCATT
GTTGGGCGATGAAGAGTGGTTTGCGCCTTCCAAACACTATAAAATGCTAT
TGAATTGGATAAAAAACTTAATTTCGGTCGGTAAAAAAGTGTGTGGACCA
TTCCCCCTGGCCACctatttgtactagtaataacatggtttagagggtga
tttgggattaataaccccgaggttcattgaaaacatttcaaaatagcctg
aacgtagtgagggctattttgaagtgtattcaatgaaacgaggggttatC
AATACAAAATCATCCGAGAaattccgcgttaattatatggtcaaaaaaag
aattgaagaacacttaatcgctattcttttcgaaacttataaaaacattc
gaaactataaaaaaccATTCGACTgaaactcttattttgattaaccaatc
aaaatattgtacgatacttttctttcaaccaatagaaattgtTGTTTATA
TCaaggcgattacaaaaaagcggggctattacggatttatcgccccgctc
gtcctttacaaatctaagctaaatgtaatcaaccatataattaacgggaa
tataatttatatcaaggcgattacaaaaaagcggggctattacggattta
tcgccccgctcgtcctttacaaatctaagctaaatgtaatcaaccatata
attaacgggaatataattattttaatcttaCGTCGTCGAAAGATTCAGCa
taaattattttcatgtttgGCTTTAAGTGTGGGTTATGTGTTGAATGCTT
GAGTTCTTTCACATTCACAAATAAGCCATTGCCAAATTATGGCAATTTCC
ACAATCGTTTAAATGCATAAAAGTTTGCGTGGTTGTGTCGTTGTGTACAA
TACCTCAATAGTGTAACACCTATATTGTTTCTATTACAGGGGAAAGGTGT
TTCACGCATTCAACTGATGCATCATGGGTACCCACAGTTCAAGAAAACAT
ATCAGAGAATACTACGTTACCTCTTTACGTCCATGATACTTCAAATTTAC
CCAATGATATTCAGAATGTTTCGTGGAGTTGCCAAACGGACAAAGTAGTT
TGGGTTTATAACGGGAGTATCATTTTGAAAGAGAGTTTTGCAAGTGATAT
CAAGATAAACAGCAATGGAAACAAAACTTTACAGGTATGTTTTCGCTCTC
TTAGAGCGACCGTAATGCAATGGTAG Coding sequence (CDS) from alignment at sc0000264_pilon:179217..182642+ >XLOC_014109 ID=XLOC_014109|Name=XLOC_014109|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1158bp|location=Sequence derived from alignment at sc0000264_pilon:179217..182642+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACATGGTTGATGCTTTTGCAATTTGCATTCTTCATAACGTTATC
TTTTTGTGGCAATGAATTGCACATCATCAATGAGAGGAGACcagaaaacc
aaaaacatttcaCCTCATCTatagacttttttacaaacaaagATAAAGGG
AATAGAGATTTCTGTAACAGTTTGAATGCAACTTGTGTCCATAAAGAAAT
TTGTGATAAATGTCGGTGTGACAAGGATTTCATATGGCTGGATTATACTC
AAGGATGCAAGGGTCAACAATATTTGTATAACATTACTAATGATGTCTAC
ATGGTTGATGCTTTTGCAATTTGCATTCTTCATAACGTTATCTTTTTGTG
GCAATGAATTGCACATCATCAATGAGAGGAGACcagaaaaccaaaaacat
ttcaCCTCATCTatagacttttttacaaacaaagATAAAGGGAATAGAGA
TTTCTGTAACAGTTTGAATGCAACTTGTGTCCATAAAGAAATTTGTGATA
AATGTCGGTGTGACAAGGATTTCATATGGCTGGATTATACTCAAGGATGC
AAGGGTCAACAATATTTGTATAACATTACTAATGGGGAAAGGTGTTTCAC
GCATTCAACTGATGCATCATGGGTACCCACAGTTCAAGAAAACATATCAG
AGAATACTACGTTACCTCTTTACGTCCATGATACTTCAAATTTACCCAAT
GATATTCAGAATGTTTCGTGGAGTTGCCAAACGGACAAAGTAGTTTGGGT
TTATAACGGGAGTATCATTTTGAAAGAGAGTTTTGCAAGTGATATCAAGA
TAAACAGCAATGGAAACAAAACTTTACAGGTATGTTTTCGCTCTCTTAGA
GCGACCGTAATGCAATGGTAGGGGAAAGGTGTTTCACGCATTCAACTGAT
GCATCATGGGTACCCACAGTTCAAGAAAACATATCAGAGAATACTACGTT
ACCTCTTTACGTCCATGATACTTCAAATTTACCCAATGATATTCAGAATG
TTTCGTGGAGTTGCCAAACGGACAAAGTAGTTTGGGTTTATAACGGGAGT
ATCATTTTGAAAGAGAGTTTTGCAAGTGATATCAAGATAAACAGCAATGG
AAACAAAACTTTACAGGTATGTTTTCGCTCTCTTAGAGCGACCGTAATGC
AATGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000264_pilon | genome | sc0000264_pilon:179217..182642 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 295-579:3142 |
| Aaloc | 1-291:1 |
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