XLOC_023215 (mRNA) -

Overview
NameXLOC_023215
Unique NameXLOC_023215
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000239_pilon:466293..466903+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023215 ID=XLOC_023215|Name=XLOC_023215|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=611bp|location=Sequence derived from alignment at sc0000239_pilon:466293..466903+ (Clytia hemisphaerica_ch_hm2_pilon)
GAATCTGAAGGTGAACTGGCCGATaaagtagaaaatagaaacaaaaaaga aaaaaagtctcggttcaaaagtagatatatatttacaggcgaaaaaagga aaaataaaataaatttttttcaagtaccaatttttagcagtcacaaaata aaaaaagataaaaaaggaaTAGAGCATCAATAGTTTGGGACATTATGAAA AACTTTGTCAATTCAGATGATGAAAAAGATGCCGAAAGATTTCTTGCTGA TATGTTTTGCACGAAAAAAGGAGAGTACTAAATGCTGCCAAATTGGCTGG TCTCAACACTCGGTCACAAAAAATGTCAATCTCTGAAGCTACCCAAATGA TGTCACTTCTACGTTTCTCTCACaaaaaaaTGAGGGAGCTTAGGACTTTG CTCCAAAATAGAAACGAGATTTTATCCCTTCTGAAGATAAAATTCGGAAA GAGCAAGAAAAGCTATTAGGCCATCTAAACGCGAGCAACACAGAGTTTGC AaccacaaaattaaaatttggaaaaagtgtaaaaacattttcaaagagaG ACATAATGTTAAAATCAAAGAATTGATACCTTTCATAAACTCAGAAATCA TGAACATAAAG

Coding sequence (CDS) from alignment at sc0000239_pilon:466293..466903+

>XLOC_023215 ID=XLOC_023215|Name=XLOC_023215|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1222bp|location=Sequence derived from alignment at sc0000239_pilon:466293..466903+ (Clytia hemisphaerica_ch_hm2_pilon)
GAATCTGAAGGTGAACTGGCCGATaaagtagaaaatagaaacaaaaaaga
aaaaaagtctcggttcaaaagtagatatatatttacaggcgaaaaaagga
aaaataaaataaatttttttcaagtaccaatttttagcagtcacaaaata
aaaaaagataaaaaaggaaTAGAGCATCAATAGTTTGGGACATTATGAAA
AACTTTGTCAATTCAGATGATGAAAAAGATGCCGAAAGATTTCTTGCTGA
TATGTTTTGCACGAAAAAAGGAGAGTACTAAATGCTGCCAAATTGGCTGG
TCTCAACACTCGGTCACAAAAAATGTCAATCTCTGAAGCTACCCAAATGA
TGTCACTTCTACGTTTCTCTCACaaaaaaaTGAGGGAGCTTAGGACTTTG
CTCCAAAATAGAAACGAGATTTTATCCCTTCTGAAGATAAAATTCGGAAA
GAGCAAGAAAAGCTATTAGGCCATCTAAACGCGAGCAACACAGAGTTTGC
AaccacaaaattaaaatttggaaaaagtgtaaaaacattttcaaagagaG
ACATAATGTTAAAATCAAAGAATTGATACCTTTCATAAACTCAGAAATCA
TGAACATAAAGGAATCTGAAGGTGAACTGGCCGATaaagtagaaaataga
aacaaaaaagaaaaaaagtctcggttcaaaagtagatatatatttacagg
cgaaaaaaggaaaaataaaataaatttttttcaagtaccaatttttagca
gtcacaaaataaaaaaagataaaaaaggaaTAGAGCATCAATAGTTTGGG
ACATTATGAAAAACTTTGTCAATTCAGATGATGAAAAAGATGCCGAAAGA
TTTCTTGCTGATATGTTTTGCACGAAAAAAGGAGAGTACTAAATGCTGCC
AAATTGGCTGGTCTCAACACTCGGTCACAAAAAATGTCAATCTCTGAAGC
TACCCAAATGATGTCACTTCTACGTTTCTCTCACaaaaaaaTGAGGGAGC
TTAGGACTTTGCTCCAAAATAGAAACGAGATTTTATCCCTTCTGAAGATA
AAATTCGGAAAGAGCAAGAAAAGCTATTAGGCCATCTAAACGCGAGCAAC
ACAGAGTTTGCAaccacaaaattaaaatttggaaaaagtgtaaaaacatt
ttcaaagagaGACATAATGTTAAAATCAAAGAATTGATACCTTTCATAAA
CTCAGAAATCATGAACATAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_023215XLOC_023215-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000239_pilongenomesc0000239_pilon:466293..466903 +
Properties
Property NameValue
Aaloc544-624:531
Aaloc541-543:526
Aaloc475-537:463
Aaloc430-474:413
Aaloc280-420:272
Aaloc169-276:162
Aaloc166-168:157
Aaloc106-162:100
Aaloc1-99:1