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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:1914753..1917380- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036527 ID=XLOC_036527|Name=XLOC_036527|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2628bp|location=Sequence derived from alignment at sc0000028_pilon:1914753..1917380- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAGAGGTTTACAGATTTGATCCTCGCTTACCTCCACCTGAGCGC
TGTTTTCACACACAACATCATTCGCTCACCATCAGATGGTTACAACCAGG
CGCGTTTTGTGTTAAGACATATCAACAAAGTTCATGCGACCGCGCATTAC
AGTCAATCGAACGTCACCTGTATCGCAAAGTGTGTCGATAAATGCGTGAC
TGACACTAACTGCAAATCGGTCAACTTCTTTCTAAACCAGGACTCTGATA
CACTACCGGATGATATTTGTCAATTGGTATCAAGTGACCTTACTGATAAA
TATGAATATACGGAAAAGCCTGGCTGGAAACATTATGACACAGGACGTAG
TGTTTTGACCAGAATCACGGTACCGGCAGGTTCAGGGTGTATGTTCCCAG
AAAGCGGTTCAGATTGTTCCTACGTTAGTACCAACAGTTTGGAGCTCCGT
ACGGGTGATGAGTGTAACAGCGTACGTGCCTATTTTGAATACGATCGTGA
TGCAGGTAATATATCCGTTTTTCAAAAAATCTAAACTTTTTTGTACGTAT
TTCAAAAAGATGATTTCCTGTCCTTATTTCAAGACTGCGTAATGAATTGA
AAAGTTATGGGATTAGAAATAATTGATTTCTTATAGAACTTGAACTGGTG
AGAGTACTTGTTTATGAAATCTTTTTTTTTCTAGGTACTTTGAAACACTA
TTGTTCGGGGCTTTACGTTTGCCCTAACAGTATCCCTACAACAAGTTATA
TAGCGGCAAAGATTCAATCACTCTCATCATCTTATAAATGCCAGGGTAAT
TTTTATAAAGCTGGTGATGAACAGTATAAATGGAGAACTAACTTCGGTAA
GCAAATTTATTTCATTTTACTTTTGTATTTATTATGACTCAGAGGTTCCT
ACGATTACATTTGATTTGATCTTCTTTTCTGTACACCAAGAACTCGTACG
AATTTGGCATTTTCACAACAAAATTAACGAAAATTTGTCGATATCTGCCC
TTTTTGTCATTATTTTGTTAAGTGTTATATTGGTGTAATAACGTAAAGAT
TTTTAGAATCTTTACCGGGGATTCAAAATAAATCTGTCAGTATTTTGACG
TTGGAAACCCTACTGCTCGCCTACCGACCCTTAGTATCAAGCTTTGACTC
ATACAAATATTTATATTTCTTTTAGATAACGGAATGGAATTCAAAGGGGT
TTGCTTGTACGTTAATGAATTGGGTGTCAACCACAATTTTGATATCAGTC
ACGCAGCATGCTATGACGGAAATACAAAACACATGTTTGCTTACGATTTT
GGTGAGTAGCAATGTTTCCCATCCCCTGTTTTTTGAAAGAACTGATGAGA
CAGAAAGAGACTAACTATCTAATGGGAATTTCTCACTATTTAAGGTGATT
TTTTAATCCGCCTTGTCATCTTTTTCAGATGACTGGACGTAGATGCACCT
ACCAAATTGTAAAATTAAGTAAAATAGACAAACTTTAGAGTGGTTCTAAT
TATTGTGTGTATATTTCCTCTGATCTTCGATGTGTTATAGCTTCGTTTTT
TTCACAACACTGCTTCTCATTTTTCAACAGAACAAGGACCAGTTAAAGCC
AGTATTTACTATTCAACCGAATCGCATACCACATACAGTGGTTTTGTGGA
CTACATCAAAGGGAGGATTGATTACAACAGCCCACCTCGTGTTGAATACC
TCAATGATTTTTCATGGTTTCTGTCGTCACCATGGGATCATGTTGGCATT
CGCTTACAAGCGGCATTCCGTGCTCAAGAGACTGGTGAATATACTTTCAC
TATCCAAGGAGATGATTACGGTGTGATGTATATCCACAGTTGTATGACAT
GTACTGATTATGTTCGAGTGGCTCGATTCACCATTTCACAATGTTTCAAT
TGTCCAACGTAAGTTGGTCTAACCCTACCCTATTCAATATTTAGTTTCTA
AGCACTTTCCATGTCAAATATTTTATATAGAGCCGAAATGTTACCAGTAT
GAGAACCTTTAGATCATGTTCAGACGTTACGGTTTCGTATCGTTCCGGCA
TGGTTTCTGTTACGGATCGAGAGTGTTCATATTGGTTTCGGAACGTTTCG
GAGCAAGAAAACGGAGCAGTTCCGTTCCGATGAAAAAAGTGGAGCGAAAT
CGTTTCGATCTGTTTTGCTTTGTAACGTCTTTTTTTTGACGTTTCAAATT
TTGACGTTCACACTTGTTTCGGAACGGTCTGCAGATGGTCTCAAAGAGCT
TTGAATTTTGAATTTCGCAAAAAATAGCTATGTACGTCGTGTTACCGTAA
CATCAGTTACCAGCTGGCTTTCCTCCCACCACTCTTGAATGCCTCTCTAC
AAATTTCATGAATCCACAAATCCACAAATAAACCTAGTAGCATTTCCTAC
AAAAGTTGTTTGGGGCGTTCCTAATGTGGTATGGATTTTGTCTTTTTTTT
TAACAGGAATTCAGAAAGTTGGCCGATCGCAATGGAGAAAGACACTGCTT
ATTACGTGGAAGTGTTTTTCTTGGATACGGGAGCGGACGACAATCTCAAT
ATGAGAATGACCACGCCTTCTGGTGTCAAACGCCCGGTTAGTTTCAATGA
TCTGGAACCGTGGGCGCCTACATATTAA Coding sequence (CDS) from alignment at sc0000028_pilon:1914753..1917380- >XLOC_036527 ID=XLOC_036527|Name=XLOC_036527|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000028_pilon:1914753..1917380- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAGAGGTTTACAGATTTGATCCTCGCTTACCTCCACCTGAGCGC
TGTTTTCACACACAACATCATTCGCTCACCATCAGATGGTTACAACCAGG
CGCGTTTTGTGTTAAGACATATCAACAAAGTTCATGCGACCGCGCATTAC
AGTCAATCGAACGTCACCTGTATCGCAAAGTGTGTCGATAAATGCGTGAC
TGACACTAACTGCAAATCGGTCAACTTCTTTCTAAACCAGGACTCTGATA
CACTACCGGATGATATTTGTCAATTGGTATCAAGTGACCTTACTGATAAA
TATGAATATACGGAAAAGCCTGGCTGGAAACATTATGACACAGGACGTAG
TGTTTTGACCAGAATCACGGTACCGGCAGGTTCAGGGTGTATGTTCCCAG
AAAGCGGTTCAGATTGTTCCTACGTTAGTACCAACAGTTTGGAGCTCCGT
ACGGGTGATGAGTGTAACAGCGTACGTGCCTATTTTGAATACGATCGTGA
TGCAGATGGCTAAGAGGTTTACAGATTTGATCCTCGCTTACCTCCACCTG
AGCGCTGTTTTCACACACAACATCATTCGCTCACCATCAGATGGTTACAA
CCAGGCGCGTTTTGTGTTAAGACATATCAACAAAGTTCATGCGACCGCGC
ATTACAGTCAATCGAACGTCACCTGTATCGCAAAGTGTGTCGATAAATGC
GTGACTGACACTAACTGCAAATCGGTCAACTTCTTTCTAAACCAGGACTC
TGATACACTACCGGATGATATTTGTCAATTGGTATCAAGTGACCTTACTG
ATAAATATGAATATACGGAAAAGCCTGGCTGGAAACATTATGACACAGGA
CGTAGTGTTTTGACCAGAATCACGGTACCGGCAGGTTCAGGGTGTATGTT
CCCAGAAAGCGGTTCAGATTGTTCCTACGTTAGTACCAACAGTTTGGAGC
TCCGTACGGGTGATGAGTGTAACAGCGTACGTGCCTATTTTGAATACGAT
CGTGATGCAGGTACTTTGAAACACTATTGTTCGGGGCTTTACGTTTGCCC
TAACAGTATCCCTACAACAAGTTATATAGCGGCAAAGATTCAATCACTCT
CATCATCTTATAAATGCCAGGGTAATTTTTATAAAGCTGGTGATGAACAG
TATAAATGGAGAACTAACTTCGGTACTTTGAAACACTATTGTTCGGGGCT
TTACGTTTGCCCTAACAGTATCCCTACAACAAGTTATATAGCGGCAAAGA
TTCAATCACTCTCATCATCTTATAAATGCCAGGGTAATTTTTATAAAGCT
GGTGATGAACAGTATAAATGGAGAACTAACTTCGATAACGGAATGGAATT
CAAAGGGGTTTGCTTGTACGTTAATGAATTGGGTGTCAACCACAATTTTG
ATATCAGTCACGCAGCATGCTATGACGGAAATACAAAACACATGTTTGCT
TACGATTTTGATAACGGAATGGAATTCAAAGGGGTTTGCTTGTACGTTAA
TGAATTGGGTGTCAACCACAATTTTGATATCAGTCACGCAGCATGCTATG
ACGGAAATACAAAACACATGTTTGCTTACGATTTTGAACAAGGACCAGTT
AAAGCCAGTATTTACTATTCAACCGAATCGCATACCACATACAGTGGTTT
TGTGGACTACATCAAAGGGAGGATTGATTACAACAGCCCACCTCGTGTTG
AATACCTCAATGATTTTTCATGGTTTCTGTCGTCACCATGGGATCATGTT
GGCATTCGCTTACAAGCGGCATTCCGTGCTCAAGAGACTGGTGAATATAC
TTTCACTATCCAAGGAGATGATTACGGTGTGATGTATATCCACAGTTGTA
TGACATGTACTGATTATGTTCGAGTGGCTCGATTCACCATTTCACAATGT
TTCAATTGTCCAACAACAAGGACCAGTTAAAGCCAGTATTTACTATTCAA
CCGAATCGCATACCACATACAGTGGTTTTGTGGACTACATCAAAGGGAGG
ATTGATTACAACAGCCCACCTCGTGTTGAATACCTCAATGATTTTTCATG
GTTTCTGTCGTCACCATGGGATCATGTTGGCATTCGCTTACAAGCGGCAT
TCCGTGCTCAAGAGACTGGTGAATATACTTTCACTATCCAAGGAGATGAT
TACGGTGTGATGTATATCCACAGTTGTATGACATGTACTGATTATGTTCG
AGTGGCTCGATTCACCATTTCACAATGTTTCAATTGTCCAACGAATTCAG
AAAGTTGGCCGATCGCAATGGAGAAAGACACTGCTTATTACGTGGAAGTG
TTTTTCTTGGATACGGGAGCGGACGACAATCTCAATATGAGAATGACCAC
GCCTTCTGGTGTCAAACGCCCGGTTAGTTTCAATGATCTGGAACCGTGGG
CGCCTACATATTAAGAATTCAGAAAGTTGGCCGATCGCAATGGAGAAAGA
CACTGCTTATTACGTGGAAGTGTTTTTCTTGGATACGGGAGCGGACGACA
ATCTCAATATGAGAATGACCACGCCTTCTGGTGTCAAACGCCCGGTTAGT
TTCAATGATCTGGAACCGTGGGCGCCTACATATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:1914753..1917380 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1123-1293:172 |
| Aaloc | 796-1119:1047 |
| Aaloc | 670-792:1452 |
| Aaloc | 508-666:1943 |
| Aaloc | 1-504:2629 |
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