|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:56774..63852+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013100 ID=XLOC_013100|Name=XLOC_013100|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7079bp|location=Sequence derived from alignment at sc0000248_pilon:56774..63852+ (Clytia hemisphaerica_ch_hm2_pilon) CATCTTTATAACATGAAGATTTACCTACCGCGTTTTGTCACTGATTTTCG
TAGAAGTGAGTTGAATCTTTCAAATTGTATTACCTCGTACCGTAAACTCT
CTGATAATCACGGACGTGTATCATAAATTTCATGTGCTATAACGAAACTT
TCGAAAAACTTTATGCAAAATAGTGCCAGGGTGAGATAAAATACTCTTCT
TGGGGATAAGCAATAAGGTTAAACAGTACCCCAGTACCCTATTAAACTTA
TAAAGAGTCAATATAACAACTGGACACGGACACTTGAGTGTCCAGTTGCT
TTATTGTTGTTAATTCATTTTTCTCTCTTTGTATTTTACACGtccttttt
tttacaagaacatccaaaaaattttgaagccttcttaactttttttagtt
ttaagcctgaaaacgttcttaatatgttcttattttcaccattttttgag
catctTTGTCCATTTACCCAAGAAATTGGGTATTGGAGTCgtcaaagtct
taaaatgttctcaacttattcttaactttttggccaccgaagccttacgt
tcttatataatttgttcttataaaaaacgtgtagtattgTTTAACAAAGA
TATCATACTTTTGCttcattcttcatttttctttcatttacaGCTACTCC
CGATGCGAACGATGAGTCTTCGAAAGGGGAGCGTCCAAAAACCATCACTT
TCCGTACAGACAGTATCGAAAGTCCACCTTATTCACCTCTTGAGCCGAAA
AGTCTCAACCTGAACGCGTTACAAAATATGGACTTGACGCGACCGGATTT
GAAAGTAACCACACCAAAAGGTTACACACCAACCTTGACCACTCGCCCTG
TCGTTGCCACAATCTCAAGTCTTGTTAACAGCACAGTGAAATCGCCTTCG
CCTGCCGAACGAAAACGTACTCCCACTCCAACCCATTCAAAATCAACGAA
AAAGGAGAAGAAAGAATCGAAGAAAACTGAATCTCCTCAATCCTTACTCT
CTCCGCCAACTAGTACCAAAAGTAAAAGCCCTTCTCCTAAGCTATCCAAG
AAATCGAAACCAGCTCCTCCATCGCCCGCCGCGCTTGCTGCaaaagagaa
ggaacgtgaacagaaagaaaaggagaagaaggagaaagaacaaagagata
gagaaaggcgggaaaaggagaaacgagaaaaagagcagagagatcgtgaa
agacgagaacaaaaagagcgcgaaaaacaggaaagagaaagagaaaaaca
agagttgaaagaacaaaaggaacgcgaaaagcaagaacgagaacgcgaaa
aacaagaacaaaaagagcgcgaaaaaaaagaaagggaGCGTGAGAAAGAG
CGACAGAAACAAAGAGAACTTGAATTGAAAAAGGAGAAGGAAATACAAGA
GGAGGAAGAGAGGCTGGCGCAATTCGAAAGAGAACGTGAACAATCCGACC
CTTTCGATGATGACCCGCCCTCTTCGCCTAATCGCACTTATCTTTTACAC
GCCCCACGGGAAGATTCACCCACTTCCACCCTCTTCAGTCCGCCTCGCGT
TCGAATAGCATCATATCAATCGGACaaaaagaaacctaaggacaaagaga
agagagagaaaaaagactctagtaaagaagacaagaaatccaaacacaag
aaaaaatctTCTACGCTCAGTAGTCCAGCTTCGTCCATAGGCTCACTAAA
ATCTCCGCCTTCCGCCAAATCTGATTTATTATCTCCGCCCAAGCTTTCAC
AACCCATAATAAAACATGAGAAATCTTCTAATAAAACTGTTATGTTCCCA
CCAGATAGTTCACCTGATATTACAGACTCTCCCGCAAAGCACACTTTCGC
GTCGCCTGAGGAACGGAAATCTATCAAACAGGAAGAGGATGAAAGTCCGT
TGAAAATAAGCCCGATCTCTTTAAGTAAACACGTGAAGAAAGAAGCGAAA
ACAGACGTTTCTGAGAATGAAATCGACGTCACCTCCTTTTCACAAGGAGA
AGAAGCAGTGCCTAGTTATAGTGAATCCTTTCAACCAAATATGTTCTTCC
CAACCAAATTCaaagacgaaaagaagaaaaagaagaaaaagaaatctgag
aaagatcgagacgaaaaaatgagaaagGTTTGTGTCCCACTGATCTATTA
GACGGGGTTTTCTTATCCTTCTTCGGGGAAAAAAGCTTCCTGCAAAGTGA
ATTTGTTTAATTCTTCCTGAGATGCGTGAAATTATTGTCGGCATCGTTTT
CAATTTTATTAGGTTCACAAAAAGGTTTCTCTCTTTAAGGTGAATTTTCT
TGagttctaaaaattttgaaagaaataatcTTTTACCATTgggaagaaga
aagataaacttaaattttgatggatcatttattaaattcgactcattaga
tcaaaagttatgctccaTCGAATAAAAAGTTGCTtccagaaagtgctcga
aatcgTTGATTAAACAAATTAAACAGAATCATGATAACATAATacattag
tatatttttgagtcattaaaaatgataattagctgtcaaAATAACCTTTT
GCTATATAAAGGAGAGtcgaatttcaataaaaaaagaaaagtaaaaaaaa
gttgagattTTTCAGATACACTCATTATTTTAACTCAACTCAACTCAACT
CATCGGAAAATGCAGCAAAATCTAGTAAGATTCatgaaaatacatcaaat
atgggtttcgaggtaaaTCCAGCCTTACATTGACCCAGTCTAGAAGCCAA
AATCTGAGTAAAAGTTCGGTAAAAGCatattaaaatgattttggtgACGA
TTTCAGACCCTTTCGAGGCTTCAGTTTCAAAATCTATGGATTTAATTACT
AAGAATTGCTCTTAATTATGTGAAGGATCTTGCatttgccaattttaaaa
taagattttaataGGTCTATTTTCAACGATTTCGAGCACtgtctgaaagt
aactttttattcaattgagcataacttttgatctaatgagtCCGATATCA
GTTTTGATACAAGCGTGAAAACGTTCAAAAATGCTAATTAGGTATGATgt
tgaaataataattttttttaacattaatttttcGAATCTCGAGAAGAGTG
AATTCAGGTGAATTGGGAGTGTATTTTTGAGCGAAAATTTACTAAATAAC
TTGACCAAATGTAAGAAAAcgaaataccttaagggaagaaattttcgcgg
aaacaaaatttcgcggttttcgcggattttgcctaaaaccgtgaaattaa
gttcccgcgaaattttacaaaatcTTCAATCCGCGAAATTAAATTCCCGC
GAAATTTAATTTATTTCACGCATTCCCCAAAATTCGTACTATTTCAAGCC
Taaaaacaggttttttgcttatttaataacgcttttggccaaaaatatcc
tgcaaccgggaaattaaatttccgcgaatttttcgaaaatcgatgaaccg
cgaaattaaattcccgcgaaaaaaaataatttgaccaaccgcgaaattaa
attcccgcgaaaatttcttcccttaaggtatccaATCCCCTCTACACGCA
CAATCTCATCTTACGTTTAAACGCGTTAACGTCAATAATTCCAATTTGTT
TAGCATGTAGACCGGAGTCGTTTATAATGCATGTAATACAGTAGTATAGG
CATTATGTGATAATACGATTACCGTTACGGGATTTAGTTTGTATAAAATT
GTCCCCTCCATTCTCCATTGGGCTTTCCCAGAAAAAAAATTTACCCCCAC
TGTTGAGGATATTGATTTTTCGAAGTATCGAACCCCCTGGATATCCCACT
TTATTAGTAAAGACCCCTGGATATCCACTCTTAAAAATATGCTCAACCCC
CTGGATATCCTCTCTTATAAAGATGATTACCCCTGGATATCGTATTTTTT
TACTTAAAAAGACACTTTACCCCCTGGATATCCGCTCCCTTGTAGAAATT
TAATCCCCTGGATATCCACTTTTGAACGAAAATCGTTAACCCCCTGGATA
TCCGATATCCTCAACAgggggggcacggactatttctggaaaagcccatt
actttttgctttatttctactatgtctgatttagtcgtctagcttgatAG
ACTATTTAGCATACTTTGGACCACAACTTTCAATAATCgttttttcttcc
atttgttagaaagaagacagagagaagaagaagGATCGTAAACGAAAACT
GGAAGAATCTCCAACGCCTTCATCATCCTCTACCTCCACAATGATTCCAA
AACTCACTTTGAAAATGGGAAGTGAAAAGATCAGTGACGACCCTCCACCT
GCAAAAATGTAAGCTGTTAATGTGTTCTGCTTTTACTCTTTACTGACAAT
AATTGGCTACAAGCTCATTAGATTTTTGCTCTGACATCTTTGTTTGAAAA
GTTTTACTACAAGCTATTTTCCAGAGATAGCATGTCTATGTTCGAAGTTT
GCGATAAATGTCCAATCATTAAGTAAAGGGACATAAAAGTAGTAAAATGT
AAACATTGCGCGAACCACGTGTCATTAAAGAGAAAAATTAAAATCACGTG
TCCAAAACGAACTTGTAAAACAATTGAAACAATCAAAATCAGCCATAGtt
gttttgattttgtatcccgctgcatacggtttgtttacaaatttcgtttg
tacttttatgtccctttaacttTAAAAGatctaaaaacaaaagataTTTG
ACAACTAAGCAACATTGCCtggtgaaaaacatttttcggaccatcaaatc
tgagtttgactcgaaaagaaatttgaatctAGGAGATCATAAATAAACAA
CGTTCGTTGTAAATCTTTTCTATCAGACCAAAGAAGCGAGCGGGATCGCC
GCCACTCAGCTTGAAAACAGTGCTGAAGCCTTCCACGTCACAAATcgtta
aaaagaagaaagagaagaagaaagataaacacaaagaaaaatcacGTGAC
TTTGATGACGAGGATGATAATGTATCTAATAGTGGTTTCTACGTCGAATC
GCAAACCGATACCGCGGTAAGTGATAGCATATGGAGGCGCTTAAATATTA
CAAGTCTctattaaagtctattccaTAAAATTGGTACACCGTACTTTGTT
GGGCATTGCTCTTTCTTAAGGGAAAAATATACAATTAAAAGTTatacctc
gttggaaagatagttTTAAGcggattgggctcttccagaaaaaatccgtt
catggggggggtggaggatatattatttttttcatgaattatccctggac
attttgatttttaaccccctggacacgggttatacccctggacaaacatc
aaatcaaccccgtggacacaaaaaattacccctggacattggaatttacc
ccctggacattgcaatttttggtattttttcaatacccctggacaattca
tcctccaccccccatgaacagattttttctggaagagcccattgatGGAA
TCTTGTAGGTAGATGTAGAAAGGTTTTAAATGGATTCTCATTCTAttctc
atcttcagcatagttACGATAACAAGATTTATTACTGTCCTGGTTGTGGC
AAACCCGATGATGGAAGTCCAATGATTGGGTGTGACAAATGCGATGATTG
GTACCACTGGTAAGACAccttctaaaaatgaattcttaAAATACACAAAT
TTCCTATCAGCAGATTCGTGTGAAGAAGTCACGAAAAAACATCGAATAAA
actctgattggctgagacatgccaagattacctcatacttcggacatttg
aaaaaaagtatgTTTATGAATACAATACCTTATcggaatttttctaaaac
agtgatgcattgtgggattgtttcgggagtattacaatggAATTCCCTCG
aagaattcctaagagatttctattctAATACCTCCAAAAACAATCCcaaa
atgcatcgcttttttagaaaaatcaaaaactccgataggATCAATTTata
gccaatcagagctttgatcgacgttttttcgtgacttttacATGATTCTG
CTTATAGAAAATTCGTCTGTTAAGATTTAAAGAACCTGTCTGCGGTAAAG
TCAGGCTGGTCTAAGGTTTTTAGCGAACTGGAAAAGAGGGCAGTTGAAAT
ATTAGATCCGACCGAAATTTCGGTAGTACCTTGTTGTACCTAACGTGCTT
ACTTTGATAGACCAGCCCCCCAGTGGTAAGTGGGATCACGATATCGcgca
atttctttttcttcaattacgatcacgcaaatcatcaaaatacttgaata
atcatgcatccctttgaaaaagtccaaatcacgcatcacggctcaaaaat
cttttaaatcacGATCACATTTTGACttctgatcacgcaatcacgaaagt
aaaattccaaatcacgtaatcacgttagaaaaaagtccctatcacgccat
tgcgaaaaccgcttgggggcGGAGGCTCATAGAAGCCAACCTTCATGATT
TTAAACcttatttaaaacaagctcAATGTAATAAAAAGGATACTGTTGCA
GTTGGTCCCAGGTTGAAAATACAGTATACTCAGGAGTTCaacatagggtg
aaaaatttgCTCGAGATAGAGAATATCTGAGATAAAGGAAGGGAAGAGTT
CTAGCatgtggagtctctataactcgaatagaCAAAGAAGTCTTGTAGCC
CCTTCAGTCAACATAACAAACCATGTGCGTTTCTTGCACGTGTTTGAGTT
ATAGAAATTCCACTGTATTGTGaaaccatagtccgtataaaaaatcccgg
tctggaagcctttttttCCATTGTGtcttacttgaaattttttgctcact
ttttgatcatgtgattaaactttaaaccaatcccaagagaagGAAtcggt
aacgtgatcaaaaactgagcaaatcgactTTCGTCCTTTGATAGTAACAA
AAGGTTAAAACAAcaagcttccagaccagtgaCTATTGTACGTTAAACCT
GTTTCATTTTTCAGGCCATGTGTAAATATTGTTGAAGAGCCAGCGGAAGA
TGAGAAATGGTTTTGTCCGAACTGTCCGGGAGGtgttacaaagaaaaaga
agaagaaaaagaaacgaGATGGCGATtga Coding sequence (CDS) from alignment at sc0000248_pilon:56774..63852+ >XLOC_013100 ID=XLOC_013100|Name=XLOC_013100|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4188bp|location=Sequence derived from alignment at sc0000248_pilon:56774..63852+ (Clytia hemisphaerica_ch_hm2_pilon) CATCTTTATAACATGAAGATTTACCTACCGCGTTTTGTCACTGATTTTCG TAGAACATCTTTATAACATGAAGATTTACCTACCGCGTTTTGTCACTGAT TTTCGTAGAACTACTCCCGATGCGAACGATGAGTCTTCGAAAGGGGAGCG TCCAAAAACCATCACTTTCCGTACAGACAGTATCGAAAGTCCACCTTATT CACCTCTTGAGCCGAAAAGTCTCAACCTGAACGCGTTACAAAATATGGAC TTGACGCGACCGGATTTGAAAGTAACCACACCAAAAGGTTACACACCAAC CTTGACCACTCGCCCTGTCGTTGCCACAATCTCAAGTCTTGTTAACAGCA CAGTGAAATCGCCTTCGCCTGCCGAACGAAAACGTACTCCCACTCCAACC CATTCAAAATCAACGAAAAAGGAGAAGAAAGAATCGAAGAAAACTGAATC TCCTCAATCCTTACTCTCTCCGCCAACTAGTACCAAAAGTAAAAGCCCTT CTCCTAAGCTATCCAAGAAATCGAAACCAGCTCCTCCATCGCCCGCCGCG CTTGCTGCaaaagagaaggaacgtgaacagaaagaaaaggagaagaagga gaaagaacaaagagatagagaaaggcgggaaaaggagaaacgagaaaaag agcagagagatcgtgaaagacgagaacaaaaagagcgcgaaaaacaggaa agagaaagagaaaaacaagagttgaaagaacaaaaggaacgcgaaaagca agaacgagaacgcgaaaaacaagaacaaaaagagcgcgaaaaaaaagaaa gggaGCGTGAGAAAGAGCGACAGAAACAAAGAGAACTTGAATTGAAAAAG GAGAAGGAAATACAAGAGGAGGAAGAGAGGCTGGCGCAATTCGAAAGAGA ACGTGAACAATCCGACCCTTTCGATGATGACCCGCCCTCTTCGCCTAATC GCACTTATCTTTTACACGCCCCACGGGAAGATTCACCCACTTCCACCCTC TTCAGTCCGCCTCGCGTTCGAATAGCATCATATCAATCGGACaaaaagaa acctaaggacaaagagaagagagagaaaaaagactctagtaaagaagaca agaaatccaaacacaagaaaaaatctTCTACGCTCAGTAGTCCAGCTTCG TCCATAGGCTCACTAAAATCTCCGCCTTCCGCCAAATCTGATTTATTATC TCCGCCCAAGCTTTCACAACCCATAATAAAACATGAGAAATCTTCTAATA AAACTGTTATGTTCCCACCAGATAGTTCACCTGATATTACAGACTCTCCC GCAAAGCACACTTTCGCGTCGCCTGAGGAACGGAAATCTATCAAACAGGA AGAGGATGAAAGTCCGTTGAAAATAAGCCCGATCTCTTTAAGTAAACACG TGAAGAAAGAAGCGAAAACAGACGTTTCTGAGAATGAAATCGACGTCACC TCCTTTTCACAAGGAGAAGAAGCAGTGCCTAGTTATAGTGAATCCTTTCA ACCAAATATGTTCTTCCCAACCAAATTCaaagacgaaaagaagaaaaaga agaaaaagaaatctgagaaagatcgagacgaaaaaatgagaaagCTACTC CCGATGCGAACGATGAGTCTTCGAAAGGGGAGCGTCCAAAAACCATCACT TTCCGTACAGACAGTATCGAAAGTCCACCTTATTCACCTCTTGAGCCGAA AAGTCTCAACCTGAACGCGTTACAAAATATGGACTTGACGCGACCGGATT TGAAAGTAACCACACCAAAAGGTTACACACCAACCTTGACCACTCGCCCT GTCGTTGCCACAATCTCAAGTCTTGTTAACAGCACAGTGAAATCGCCTTC GCCTGCCGAACGAAAACGTACTCCCACTCCAACCCATTCAAAATCAACGA AAAAGGAGAAGAAAGAATCGAAGAAAACTGAATCTCCTCAATCCTTACTC TCTCCGCCAACTAGTACCAAAAGTAAAAGCCCTTCTCCTAAGCTATCCAA GAAATCGAAACCAGCTCCTCCATCGCCCGCCGCGCTTGCTGCaaaagaga aggaacgtgaacagaaagaaaaggagaagaaggagaaagaacaaagagat agagaaaggcgggaaaaggagaaacgagaaaaagagcagagagatcgtga aagacgagaacaaaaagagcgcgaaaaacaggaaagagaaagagaaaaac aagagttgaaagaacaaaaggaacgcgaaaagcaagaacgagaacgcgaa aaacaagaacaaaaagagcgcgaaaaaaaagaaagggaGCGTGAGAAAGA GCGACAGAAACAAAGAGAACTTGAATTGAAAAAGGAGAAGGAAATACAAG AGGAGGAAGAGAGGCTGGCGCAATTCGAAAGAGAACGTGAACAATCCGAC CCTTTCGATGATGACCCGCCCTCTTCGCCTAATCGCACTTATCTTTTACA CGCCCCACGGGAAGATTCACCCACTTCCACCCTCTTCAGTCCGCCTCGCG TTCGAATAGCATCATATCAATCGGACaaaaagaaacctaaggacaaagag aagagagagaaaaaagactctagtaaagaagacaagaaatccaaacacaa gaaaaaatctTCTACGCTCAGTAGTCCAGCTTCGTCCATAGGCTCACTAA AATCTCCGCCTTCCGCCAAATCTGATTTATTATCTCCGCCCAAGCTTTCA CAACCCATAATAAAACATGAGAAATCTTCTAATAAAACTGTTATGTTCCC ACCAGATAGTTCACCTGATATTACAGACTCTCCCGCAAAGCACACTTTCG CGTCGCCTGAGGAACGGAAATCTATCAAACAGGAAGAGGATGAAAGTCCG TTGAAAATAAGCCCGATCTCTTTAAGTAAACACGTGAAGAAAGAAGCGAA AACAGACGTTTCTGAGAATGAAATCGACGTCACCTCCTTTTCACAAGGAG AAGAAGCAGTGCCTAGTTATAGTGAATCCTTTCAACCAAATATGTTCTTC CCAACCAAATTCaaagacgaaaagaagaaaaagaagaaaaagaaatctga gaaagatcgagacgaaaaaatgagaaagaaagaagacagagagaagaaga agGATCGTAAACGAAAACTGGAAGAATCTCCAACGCCTTCATCATCCTCT ACCTCCACAATGATTCCAAAACTCACTTTGAAAATGGGAAGTGAAAAGAT CAGTGACGACCCTCCACCTGCAAAAATaaagaagacagagagaagaagaa gGATCGTAAACGAAAACTGGAAGAATCTCCAACGCCTTCATCATCCTCTA CCTCCACAATGATTCCAAAACTCACTTTGAAAATGGGAAGTGAAAAGATC AGTGACGACCCTCCACCTGCAAAAATACCAAAGAAGCGAGCGGGATCGCC GCCACTCAGCTTGAAAACAGTGCTGAAGCCTTCCACGTCACAAATcgtta aaaagaagaaagagaagaagaaagataaacacaaagaaaaatcacGTGAC TTTGATGACGAGGATGATAATGTATCTAATAGTGGTTTCTACGTCGAATC GCAAACCGATACCGCGACCAAAGAAGCGAGCGGGATCGCCGCCACTCAGC TTGAAAACAGTGCTGAAGCCTTCCACGTCACAAATcgttaaaaagaagaa agagaagaagaaagataaacacaaagaaaaatcacGTGACTTTGATGACG AGGATGATAATGTATCTAATAGTGGTTTCTACGTCGAATCGCAAACCGAT ACCGCGcatagttACGATAACAAGATTTATTACTGTCCTGGTTGTGGCAA ACCCGATGATGGAAGTCCAATGATTGGGTGTGACAAATGCGATGATTGGT ACCACTGcatagttACGATAACAAGATTTATTACTGTCCTGGTTGTGGCA AACCCGATGATGGAAGTCCAATGATTGGGTGTGACAAATGCGATGATTGG TACCACTGGCCATGTGTAAATATTGTTGAAGAGCCAGCGGAAGATGAGAA ATGGTTTTGTCCGAACTGTCCGGGAGGtgttacaaagaaaaagaagaaga aaaagaaacgaGATGGCGATtgaGCCATGTGTAAATATTGTTGAAGAGCC AGCGGAAGATGAGAAATGGTTTTGTCCGAACTGTCCGGGAGGtgttacaa agaaaaagaagaagaaaaagaaacgaGATGGCGATtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000248_pilon | genome | sc0000248_pilon:56774..63852 + |
Properties
| Property Name | Value |
| Aaloc | 1981-2094:6966 |
| Aaloc | 1879-1977:5509 |
| Aaloc | 1690-1878:4828 |
| Aaloc | 1540-1686:4160 |
| Aaloc | 58-1539:646 |
| Aaloc | 1-54:1 |
|