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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000381_pilon:80276..84809+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019776 ID=XLOC_019776|Name=XLOC_019776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4534bp|location=Sequence derived from alignment at sc0000381_pilon:80276..84809+ (Clytia hemisphaerica_ch_hm2_pilon)
gtttctgttttttgcagaggttttacatttCGAAGGCTGGTAAACTCATC
ATCCACATCAACATCTAAGGCGGTAAAATACTTTTATAATACTTTTTGCT
CTTCATCTCTTTTCGTGTATCAGACTcttttatttgatctttttaataGT
TTCGGtccaaatttcacaaaattacTTATTTTGCTTCCTCACATATTCTT
GAGATTATCTGAAGATTACAAAAACATTTACAAAGCTATGTAAAAAAGTC
GTCATTATTATATGATTATAAAAAGGATTTCTGTTTTCTCTaggcttcaa
aagtttcttTGGTCGACAGTGAAGAAGATGAAAGTGACGAAACAAATGGA
AGTTTCATTACCacaacaaagaaaaagtttatctCAAATTCCAATAAACC
TAAAGAGAGGGATGTGAGAATTGTTACAAGCCCTATGAGGGATCAAGCTA
TTGGTAAGAAGTAAATGCTCATAATATTTCACCTTTTTAAtacggtttgt
gtaaaccgcaggttacaggtcgcatgttacaggttacaggtcaacaaagt
gcagaccggaaaaaagataataagatcataacatatacataacataacat
caatacataacgcattaataagttaatagcaagacataGTCGAACGAACT
TGACAGGagtaatgttaatttttatttttaaacatgtTTCGATTATATTA
ATATCATCATCAGTAATTATTTAGtgttctaaaaataaataaaaattagg
ttattaataaaagtgcaagtaaaatgataaaatgagaCGAAGTATAagga
caaaatcaaaataatcaaactatCAAATTAACTTTTCAACGTTTTCTGGA
TATTCAAGACACCTCTTAAACGTTCATTCCATAAGTACTCCCTTTCAGAC
AAAGAGTACTTTCCTCTAGAGTACATGTTTTCAAGGTACTGAACTGAGCA
taacataacgcattaaattacaaaaaagtaatacatgttatttagatatt
ataaaatgacaattgaatagaataacaacctagtgacacttacttacaaa
aataatgacaaaatcataaaatatgatgcctcacaagacaaaaacacaaa
aaatatttatcatgcaaaatgtgatgtggatggtgtgaatggataaaaaa
tggcaccaaacagaagcttgcaaggtccctaagagagtggttttagaagg
atggaactaattaattattcagttattattttaatgtcttaatgacaatt
tttgacaaaaatattaacagaatcataaaatctgatgcaagaaaagacaa
aaacacgaaaaaattttataatacagaatgtgatgttgatagtgtgaatg
gatataaaacggcaccaatcagaagcttgtgaggtccctaagagagtggt
tttagaaggatggaactaattaatcattcaattgttattttaatgactta
atgacaatttttgacaaaaatattgacagaatcacaaaatatcatgtctt
aaagagaaaaacaccaaaaatatttagcatactgaatgtgatgataacaa
tatggctggatataaaattacaccaatcagatgctcgtgagttctctgag
aaggtagttttagagcgatgtgttttattatatgtaaccatcatataaca
ttacaaacattacaatatgtaatatccctgttatacgtataatatggttt
caaatattttctggtctgcgttatacacggtgcaaactgcgaaagatcga
taaaaaaagcacatggttaattttgatgtttgaaatggttttatatggat
gaaattgcttgagaattatgtttttgataatttttccaaacattttcctc
tgcaatgacattgattagagtcgacctgtcatcactgacctgtaacctgt
aacctgtaacctgtgacctgtaacctgcggtttacacaaaccgttTTTAA
TATAGTTTCctgtaaagtttttttggatttgaaacaAGTTTGGAGTCAAC
ATTAAAATTTATTACAAACTTTATCTGAATTACATTACTTGACTTCAATA
ATTTTGTTTAATTTGCAGGCAATGATGAGATTGAAGAATTTCCTTCGTTC
AATCTTGTAAGATTTTTATAACCAATCCTAAACTATTTTATTTGTTAGCT
TTGTCAGGGCTGTGGTAGGTAAAGTGAAGTGTTCAAATAGCCTCCATAAT
AATCTATATAATAATAGCTGTTCGTGCCTGAAGCtttttttGCAGTATTT
TTGTTTCCGCTAACGATTTTAGCTCTTGCGGGACTGTTTAGTGGGTTAat
gtttcattaaaaagcaacagtttttgtcttttttgataTAAAAACGAATA
GTCTAATCCCCTGGTTAAAAATGATTAACACATCATAAAACTAATtgcaa
aattgagaaaaaacagCATTACTTTGACGACGTCTGGGGCCACAAAGTTT
TTAGAAATCACAATTTTATTAAATAAGGCATCTGATACAATGTAACACAA
CCAATTTTTGATGGCCTTAGCTGAATTGTGGTAATTCTAAtctgaaaatt
aattttcacattttcaggATGATACAAGCTTCAATATAAATGATGAAGAA
CTAGAAATGTTTGGTAATAACCGGTACACAGATGGAATTGTACCCACCAC
TCAAGATACTGACAAAGGTTGATTTTCCATTCACATATTGTTGAACTAGT
AAACATTAGTTTGTCTAAGAATTTTGTTTACTTATATCTATTCTATTTTA
GCTTTAAAGCGATAGTCATGTTTTTTATATATTCTAAAATTTGtgaggtt
tttttataatatttttacaCTGTTATCAATCTTCATCTTGTTTCATTCTT
AGATATTACTACTTGATAACATGATAACATTTACTTTTCTTTAATCAGGC
GAAGAAGAAGCTGCCAaggaaatagaaaaagaaaataattttcctggTTC
ACCACCTCTGTTCACCAATGATGACTTAGACTTGGGTATGATCCAAGACG
GGGATGATGATATTCCTTGTTCACCATCAATGATTTCTCCTAACTCCTCT
TCACGACAAAGAAATGATTCTCAATCGTCGTAAGTAAAATAACTTCAGTG
ATAACACTTGAAgattaaatttgaccaactctGCAACCCTGTGTTGATTC
ACTTTTGTTGTTGTGAACTTTTGTCTTTaggtttttcaaaatggtaattC
TTAGAATTTCTtgaagtctctcaaagggtgtactacaatcaaggtcataa
tatttgagaaaaaagggaagttcaccgggaagttttaaaaccacaatcga
tttgtaagtgctctaaagtaggttcgaagggtagagttttaactctgagt
tttaacatgagacttaagaccaaaagttcaaaaatagtccaataagtctc
agaatatagcctggaagtctttcaaatgaacaaaaaatggTTCAAACAAC
CAAAGTTCACAAtaatcaatatatttcaaccatgattgtacttAACACAG
GAGAGAATGTAGTGTTTTAAGCTTTTACTGCACttatttttttgactgaa
ttcTCCATCAAGTCAAAAGAAGTAATCAATTATTTGTTTGGATCtttcaa
caataaaaaaaacagctGATCTTACACACCTACCAACCCTTAGCGGCGCG
CTCAGCATTTTTGGAGACTGGTAATGAACTTACAAGGAACATTTGTTCTC
GGCGCACGGCATTTTTAAGTGCTACCtctaaaacaaaccaacaaattCAC
GCGGTAGTGTGCATACTATTTTTAGCATTCGAataacttaaaggttttgt
ttttaaataaagagtgatatcgtttgcttattcatcaattttaatttaca
agctttttcacattgatttgacacggatgtggagcaagattggtcagaaa
gaggaaaagaaaaacagttttttgtttattcagcacaatataacaatagg
tagacactaacctgatatgaaatatttgcttaatatgaaacgggaacacc
tactcttaggttccaaataaacggaggggggttcgaataaacggggagtt
ggaaaattttcgaaatttcaataaacgaggggggacctaattgccagaag
ggttggaaattttacttctgaaaacccaaaaataaggtaaatagaggcta
aaatcaggctatttcaGAGCAAAATAAGAGGCcatctctttgacagctga
aaatattattaaaaattaataaacgggggaggtcctaataaggtccgggg
gtgctggaaaattttcgaaaaattaacaagcgggggggggcgtttatttg
gaacctatgagtatgtaaaaataaaaccttttacaattttcataagAGCT
CTCTTGCGCTTGCGTTTTCGATACCGTCATCAGGAAgaattttccttgta
ttttcgttaccagtctcctcaaaagcgttaagggttgataggtgtattat
gtttagaaaaaagtttaacttttcgctgaatttttttccagaGACATATG
CAATGGAAATGATACATTTCTATCGACAAAATCT Coding sequence (CDS) from alignment at sc0000381_pilon:80276..84809+ >XLOC_019776 ID=XLOC_019776|Name=XLOC_019776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1188bp|location=Sequence derived from alignment at sc0000381_pilon:80276..84809+ (Clytia hemisphaerica_ch_hm2_pilon)
gtttctgttttttgcagaggttttacatttCGAAGGCTGGTAAACTCATC
ATCCACATCAACATCTAAGGCGgtttctgttttttgcagaggttttacat
ttCGAAGGCTGGTAAACTCATCATCCACATCAACATCTAAGGCGgcttca
aaagtttcttTGGTCGACAGTGAAGAAGATGAAAGTGACGAAACAAATGG
AAGTTTCATTACCacaacaaagaaaaagtttatctCAAATTCCAATAAAC
CTAAAGAGAGGGATGTGAGAATTGTTACAAGCCCTATGAGGGATCAAGCT
ATTGgcttcaaaagtttcttTGGTCGACAGTGAAGAAGATGAAAGTGACG
AAACAAATGGAAGTTTCATTACCacaacaaagaaaaagtttatctCAAAT
TCCAATAAACCTAAAGAGAGGGATGTGAGAATTGTTACAAGCCCTATGAG
GGATCAAGCTATTGGCAATGATGAGATTGAAGAATTTCCTTCGTTCAATC
TTGCAATGATGAGATTGAAGAATTTCCTTCGTTCAATCTTgATGATACAA
GCTTCAATATAAATGATGAAGAACTAGAAATGTTTGGTAATAACCGGTAC
ACAGATGGAATTGTACCCACCACTCAAGATACTGACAAAGgATGATACAA
GCTTCAATATAAATGATGAAGAACTAGAAATGTTTGGTAATAACCGGTAC
ACAGATGGAATTGTACCCACCACTCAAGATACTGACAAAGGCGAAGAAGA
AGCTGCCAaggaaatagaaaaagaaaataattttcctggTTCACCACCTC
TGTTCACCAATGATGACTTAGACTTGGGTATGATCCAAGACGGGGATGAT
GATATTCCTTGTTCACCATCAATGATTTCTCCTAACTCCTCTTCACGACA
AAGAAATGATTCTCAATCGTCGCGAAGAAGAAGCTGCCAaggaaatagaa
aaagaaaataattttcctggTTCACCACCTCTGTTCACCAATGATGACTT
AGACTTGGGTATGATCCAAGACGGGGATGATGATATTCCTTGTTCACCAT
CAATGATTTCTCCTAACTCCTCTTCACGACAAAGAAATGATTCTCAATCG
TCaGACATATGCAATGGAAATGATACATTTCTATCGACAAAATCTaGACA
TATGCAATGGAAATGATACATTTCTATCGACAAAATCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000381_pilon | genome | sc0000381_pilon:80276..84809 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 553-594:4493 |
| Aaloc | 373-549:2901 |
| Aaloc | 271-369:2568 |
| Aaloc | 235-270:2071 |
| Aaloc | 73-231:294 |
| Aaloc | 1-72:1 |
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