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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000391_pilon:424..3459+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032959 ID=XLOC_032959|Name=XLOC_032959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3036bp|location=Sequence derived from alignment at sc0000391_pilon:424..3459+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttagCATGCGAAATTATGGACGATGAAACAGAAATTAAAGAAGTTTA
CGACTTTGAAGGCGAGGAGCATGATCTTAAGCATGTTTGTTTTGACATCG
AAGAAGATCTTCTCGATTTCGAGGAGAAATATGACGGCGATATCGAATCG
TTTTGGGGCGAGCATGACAGCGAAGAAGTCGAAGGACCAACAGGAAATGA
AGGTAGAGCTTATTTTAACCTTTAATAAACGAAATCCATTTGTATACTTC
CTACTTTATTGTCATGGACACCTGCAGACCTCGTCGATTGGCACGCCATT
TGTTATCCTTTTATAAACCAACCTGGCAGGTGGCTGAACGAAAACCTGGC
AAATCACcttgttggacctacctgaagtcCTATAAATAAATTAACCGacg
tttgttcgtccgttcgttaccagcttttctctagattggttcattcaatt
tttcagatttttcttgCACAAAGGTGCGttaccctcgaatgtgacggagc
ccgattttcgaggaaaaaaattgggtaaatttcagccaaaGAATGGCTAG
TTGAAACCAGTTGAAATTATCTTTGCAATTTCATCTCGTCTTTTTAGGTT
CGTCGCGTGATCGTTGGTATTCAAATTATATTATTCTCGCCATTCCTGaa
agtcaaaaattcaaattgctCTGTCAGAGTGGAATAAAGGAAAGCCTTCA
ATATCTGTCTGAAGAATTTGAATCATCTTCACCAAAGTTCAAAGATAATT
TCCGTACATTTTTGACAAAGTTCAAAGCTTCTGCTTACAAGGATGAAAAG
CCCTATTCCAGACAGCCCCAAAATATCGTCAATAAGCAACCGCCTGGTCG
AAAAAGTATGACGAAAGTCATGTCAATGCTGGAGAAGACACGAGACCCTG
ACCTTGCCAATTTGTTCGTCAAGAACGTTCTTAATGGAAGTAAATCTTCA
TATGCATATCGTGGTGATGGCGAAATCTTCAGCATCTATTACGAGAACAT
CGAGAAACCTGTAGCCGATTTGCTGAATTCAGTATCGTGGGAATCCATTA
AAGAGGAAGTTGAATCTGTCATCGTTGCGTCTCCAATTAACCATTATCTC
CGATGGATGAAAGCTTACAACCATAATGGCATCACAGAAATCGCGCACAA
AATCATAGAACTGAGTTTACGAAAGGTGGAAAAACTAACTGGAGAAGAGT
TCTACCCTTTATGGGGAGAAATCTTTTCACTGATCTTCAACAATGAATTG
TCTGGCACACGATGGTTGGATTCAATCATGACTTGCACTCAAATTATCTC
CAACCTTCCACTTCTTTCCCACTTGTGCTCTCGTTTGTCTCCTGAAAACC
AGACAAAGTTTCCGCGCCTTCAACGGATTAATCGACCTCATGAAAAAACC
AACTACATCGCATTCTAACGATACCATTGCATCAAATTTGTTCTCGGCTA
TAAAACAAATTATCGAAAACTTATTCTATAAAAGACAACTTCAAGAGCTT
TGCGACGCCCTCGTTGCAAACAACAAATTACCAGTTATCGGACttttttt
GGGTTTACTACTAAAAGATAAACAGTCGTGTACAGACTCTGAagctttca
aattatttttgtgtGCTTACATGAGCTGGATGGATAACACAACTTTGAAC
GGATCGAATCTGAAAGAAATTGTCAACATCGCAAACGTCGTTTACCAGAG
TAACACACCTTCAAATGAAACATCTGCTAAATTTATCGTTTCCTGCAAGA
AAATTGCCAACCCTGATCTACTTTGCATGACCCTGAACGAGCTATTCGCA
GTCTTCAAAGAGAAAAATGTTCCTGACCATTCTATCGTTTTGAAGTCCCT
CTTAGATTCGCTGTTAAATCTGATCACATTGCAGCCTCTGCGTAACGCGA
AATCGATGTCTgccttgattttgtTTAtttttgaaaaaggaagaaCATTT
GAAGACATCCTATGTAAATTCATTGCAACCAAGTATGTCTCTAACTCAAT
GGAAACCCTTGGCAACGTTCTCGCGACTCTATGTACATCTGACAATAAGG
AAACGTTAAGACCAAACAATAACTTTCAAGCAATCTTAGGACTCTATACA
CTTCTCTTACAAAATGGTGTAAAACCTGATCTAAAATCGTATTCGGCAAC
GTTGACTTTTTTGTTCAACGATGAAAGCTGGTCATTGTCTCTACCTCTTT
TACCAACGCTGTTAGAAATTGACTTTAttaagaaagatttcaaaaactgT
GCATTCAGTATCAGTCAAGTTCCCTCTGGTATCATAACTGACAATTTCAA
AAAGCTTCTCAACACTGGAGTGGATTCACTGGAGCTGTTCCTCGTCCAAA
ACAAAACAGTTAGTGATCCTGATTACAAAGTCATCTTGGGGTTTGTTCAA
GTTTTATTCGATGATTTAACCAACTTTGGTGATATCGTACTACGTTTCAT
TTCCATTGCTCAGCTGAAAATTAACGATTATTCAAACATGTCCGCTCCTT
CATCCGTCCTCAAACGATTGATTAACGACCTTAGACCGAAATACGTGGCT
ACAGAGATGTATGCAAAGCTTCTCCTCGTACGCGTTTCGAATTTGCAGCT
CATTCAATCTTTTGGTCAACCGAAATTAAGTTGGGTTCAACCTAATGCTA
TCTTAACTGATCACCCAACGGTTCAGCAATTCCTTCGAAGTCCGCGAGAG
GATTTTGCTTATCGAAATTTCAATGGAATTGCTCATGCCAGAAACTGGGC
AAGTAAGCATCAAGGATACCACCCTCAAAAAGGTTACAGTTTCAGAGCGT
CTACTCACGGTACGGGAAGAAATGCCACCGCTCAATTGAAAAAAGGGAGA
GAATTTTACAGTTTGAAGTTGAAAGCTTATCAAACTCTAATGACTGAATT
GGAACAATTGCGAACTAAATTGAAAGCTTTCCCGAACGTTCATTCTGAAA
TAGGTGACAAAAGACCTGCGACTACCCCGTTATCAAATATTTCGAACATG
CCGCCATCAAAGAAAGTTGTCATTGAGATTGATTGA Coding sequence (CDS) from alignment at sc0000391_pilon:424..3459+ >XLOC_032959 ID=XLOC_032959|Name=XLOC_032959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5282bp|location=Sequence derived from alignment at sc0000391_pilon:424..3459+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttagCATGCGAAATTATGGACGATGAAACAGAAATTAAAGAAGTTTA
CGACTTTGAAGGCGAGGAGCATGATCTTAAGCATGTTTGTTTTGACATCG
AAGAAGATCTTCTCGATTTCGAGGAGAAATATGACGGCGATATCGAATCG
TTTTGGGGCGAGCATGACAGCGAAGAAGTCGAAGGACCAACAGGAAATGA
AGtttttagCATGCGAAATTATGGACGATGAAACAGAAATTAAAGAAGTT
TACGACTTTGAAGGCGAGGAGCATGATCTTAAGCATGTTTGTTTTGACAT
CGAAGAAGATCTTCTCGATTTCGAGGAGAAATATGACGGCGATATCGAAT
CGTTTTGGGGCGAGCATGACAGCGAAGAAGTCGAAGGACCAACAGGAAAT
GAAGGTTCGTCGCGTGATCGTTGGTATTCAAATTATATTATTCTCGCCAT
TCCTGaaagtcaaaaattcaaattgctCTGTCAGAGTGGAATAAAGGAAA
GCCTTCAATATCTGTCTGAAGAATTTGAATCATCTTCACCAAAGTTCAAA
GATAATTTCCGTACATTTTTGACAAAGTTCAAAGCTTCTGCTTACAAGGA
TGAAAAGCCCTATTCCAGACAGCCCCAAAATATCGTCAATAAGCAACCGC
CTGGTCGAAAAAGTATGACGAAAGTCATGTCAATGCTGGAGAAGACACGA
GACCCTGACCTTGCCAATTTGTTCGTCAAGAACGTTCTTAATGGAAGTAA
ATCTTCATATGCATATCGTGGTGATGGCGAAATCTTCAGCATCTATTACG
AGAACATCGAGAAACCTGTAGCCGATTTGCTGAATTCAGTATCGTGGGAA
TCCATTAAAGAGGAAGTTGAATCTGTCATCGTTGCGTCTCCAATTAACCA
TTATCTCCGATGGATGAAAGCTTACAACCATAATGGCATCACAGAAATCG
CGCACAAAATCATAGAACTGAGTTTACGAAAGGTGGAAAAACTAACTGGA
GAAGAGTTCTACCCTTTATGGGGAGAAATCTTTTCACTGATCTTCAACAA
TGAATTGTCTGGCACACGATGGTTGGATTCAATCATGACTTGCACTCAAA
TTATCTCCAACCTTCCACTTCTTTCCCACTTGTGCTCTCGTTTGTCTCCT
GAAAACCAGACAAAGTTTCCGCGCCTTCAACGGATTAATCGACCTCATGA
AAAAACCAACTACATCGCATTCTAACGATACCATTGCATCAAATTTGTTC
TCGGCTATAAAACAAATTATCGAAAACTTATTCTATAAAAGACAACTTCA
AGAGCTTTGCGACGCCCTCGTTGCAAACAACAAATTACCAGTTATCGGAC
tttttttGGGTTTACTACTAAAAGATAAACAGTCGTGTACAGACTCTGAa
gctttcaaattatttttgtgtGCTTACATGAGCTGGATGGATAACACAAC
TTTGAACGGATCGAATCTGAAAGAAATTGTCAACATCGCAAACGTCGTTT
ACCAGAGTAACACACCTTCAAATGAAACATCTGCTAAATTTATCGTTTCC
TGCAAGAAAATTGCCAACCCTGATCTACTTTGCATGACCCTGAACGAGCT
ATTCGCAGTCTTCAAAGAGAAAAATGTTCCTGACCATTCTATCGTTTTGA
AGTCCCTCTTAGATTCGCTGTTAAATCTGATCACATTGCAGCCTCTGCGT
AACGCGAAATCGATGTCTgccttgattttgtTTAtttttgaaaaaggaag
aaCATTTGAAGACATCCTATGTAAATTCATTGCAACCAAGTATGTCTCTA
ACTCAATGGAAACCCTTGGCAACGTTCTCGCGACTCTATGTACATCTGAC
AATAAGGAAACGTTAAGACCAAACAATAACTTTCAAGCAATCTTAGGACT
CTATACACTTCTCTTACAAAATGGTGTAAAACCTGATCTAAAATCGTATT
CGGCAACGTTGACTTTTTTGTTCAACGATGAAAGCTGGTCATTGTCTCTA
CCTCTTTTACCAACGCTGTTAGAAATTGACTTTAttaagaaagatttcaa
aaactgTGCATTCAGTATCAGTCAAGTTCCCTCTGGTATCATAACTGACA
ATTTCAAAAAGCTTCTCAACACTGGAGTGGATTCACTGGAGCTGTTCCTC
GTCCAAAACAAAACAGTTAGTGATCCTGATTACAAAGTCATCTTGGGGTT
TGTTCAAGTTTTATTCGATGATTTAACCAACTTTGGTGATATCGTACTAC
GTTTCATTTCCATTGCTCAGCTGAAAATTAACGATTATTCAAACATGTCC
GCTCCTTCATCCGTCCTCAAACGATTGATTAACGACCTTAGACCGAAATA
CGTGGCTACAGAGATGTATGCAAAGCTTCTCCTCGTACGCGTTTCGAATT
TGCAGCTCATTCAATCTTTTGGTCAACCGAAATTAAGTTGGGTTCAACCT
AATGCTATCTTAACTGATCACCCAACGGTTCAGCAATTCCTTCGAAGTCC
GCGAGAGGATTTTGCTTATCGAAATTTCAATGGAATTGCTCATGCCAGAA
ACTGGGCAAGTAAGCATCAAGGATACCACCCTCAAAAAGGTTACAGTTTC
AGAGCGTCTACTCACGGTACGGGAAGAAATGCCACCGCTCAATTGAAAAA
AGGGAGAGAATTTTACAGTTTGAAGTTGAAAGCTTATCAAACTCTAATGA
CTGAATTGGAACAATTGCGAACTAAATTGAAAGCTTTCCCGAACGTTCAT
TCTGAAATAGGTGACAAAAGACCTGCGACTACCCCGTTATCAAATATTTC
GAACATGCCGCCATCAAAGAAAGTTGTCATTGAGATTGATTGAGTTCGTC
GCGTGATCGTTGGTATTCAAATTATATTATTCTCGCCATTCCTGaaagtc
aaaaattcaaattgctCTGTCAGAGTGGAATAAAGGAAAGCCTTCAATAT
CTGTCTGAAGAATTTGAATCATCTTCACCAAAGTTCAAAGATAATTTCCG
TACATTTTTGACAAAGTTCAAAGCTTCTGCTTACAAGGATGAAAAGCCCT
ATTCCAGACAGCCCCAAAATATCGTCAATAAGCAACCGCCTGGTCGAAAA
AGTATGACGAAAGTCATGTCAATGCTGGAGAAGACACGAGACCCTGACCT
TGCCAATTTGTTCGTCAAGAACGTTCTTAATGGAAGTAAATCTTCATATG
CATATCGTGGTGATGGCGAAATCTTCAGCATCTATTACGAGAACATCGAG
AAACCTGTAGCCGATTTGCTGAATTCAGTATCGTGGGAATCCATTAAAGA
GGAAGTTGAATCTGTCATCGTTGCGTCTCCAATTAACCATTATCTCCGAT
GGATGAAAGCTTACAACCATAATGGCATCACAGAAATCGCGCACAAAATC
ATAGAACTGAGTTTACGAAAGGTGGAAAAACTAACTGGAGAAGAGTTCTA
CCCTTTATGGGGAGAAATCTTTTCACTGATCTTCAACAATGAATTGTCTG
GCACACGATGGTTGGATTCAATCATGACTTGCACTCAAATTATCTCCAAC
CTTCCACTTCTTTCCCACTTGTGCTCTCGTTTGTCTCCTGAAAACCAGAC
AAAGTTTCCGCGCCTTCAACGGATTAATCGACCTCATGAAAAAACCAACT
ACATCGCATTCTAACGATACCATTGCATCAAATTTGTTCTCGGCTATAAA
ACAAATTATCGAAAACTTATTCTATAAAAGACAACTTCAAGAGCTTTGCG
ACGCCCTCGTTGCAAACAACAAATTACCAGTTATCGGACtttttttGGGT
TTACTACTAAAAGATAAACAGTCGTGTACAGACTCTGAagctttcaaatt
atttttgtgtGCTTACATGAGCTGGATGGATAACACAACTTTGAACGGAT
CGAATCTGAAAGAAATTGTCAACATCGCAAACGTCGTTTACCAGAGTAAC
ACACCTTCAAATGAAACATCTGCTAAATTTATCGTTTCCTGCAAGAAAAT
TGCCAACCCTGATCTACTTTGCATGACCCTGAACGAGCTATTCGCAGTCT
TCAAAGAGAAAAATGTTCCTGACCATTCTATCGTTTTGAAGTCCCTCTTA
GATTCGCTGTTAAATCTGATCACATTGCAGCCTCTGCGTAACGCGAAATC
GATGTCTgccttgattttgtTTAtttttgaaaaaggaagaaCATTTGAAG
ACATCCTATGTAAATTCATTGCAACCAAGTATGTCTCTAACTCAATGGAA
ACCCTTGGCAACGTTCTCGCGACTCTATGTACATCTGACAATAAGGAAAC
GTTAAGACCAAACAATAACTTTCAAGCAATCTTAGGACTCTATACACTTC
TCTTACAAAATGGTGTAAAACCTGATCTAAAATCGTATTCGGCAACGTTG
ACTTTTTTGTTCAACGATGAAAGCTGGTCATTGTCTCTACCTCTTTTACC
AACGCTGTTAGAAATTGACTTTAttaagaaagatttcaaaaactgTGCAT
TCAGTATCAGTCAAGTTCCCTCTGGTATCATAACTGACAATTTCAAAAAG
CTTCTCAACACTGGAGTGGATTCACTGGAGCTGTTCCTCGTCCAAAACAA
AACAGTTAGTGATCCTGATTACAAAGTCATCTTGGGGTTTGTTCAAGTTT
TATTCGATGATTTAACCAACTTTGGTGATATCGTACTACGTTTCATTTCC
ATTGCTCAGCTGAAAATTAACGATTATTCAAACATGTCCGCTCCTTCATC
CGTCCTCAAACGATTGATTAACGACCTTAGACCGAAATACGTGGCTACAG
AGATGTATGCAAAGCTTCTCCTCGTACGCGTTTCGAATTTGCAGCTCATT
CAATCTTTTGGTCAACCGAAATTAAGTTGGGTTCAACCTAATGCTATCTT
AACTGATCACCCAACGGTTCAGCAATTCCTTCGAAGTCCGCGAGAGGATT
TTGCTTATCGAAATTTCAATGGAATTGCTCATGCCAGAAACTGGGCAAGT
AAGCATCAAGGATACCACCCTCAAAAAGGTTACAGTTTCAGAGCGTCTAC
TCACGGTACGGGAAGAAATGCCACCGCTCAATTGAAAAAAGGGAGAGAAT
TTTACAGTTTGAAGTTGAAAGCTTATCAAACTCTAATGACTGAATTGGAA
CAATTGCGAACTAAATTGAAAGCTTTCCCGAACGTTCATTCTGAAATAGG
TGACAAAAGACCTGCGACTACCCCGTTATCAAATATTTCGAACATGCCGC
CATCAAAGAAAGTTGTCATTGAGATTGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391_pilon | genome | sc0000391_pilon:424..3459 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2113-3780:1369 |
| Aaloc | 1342-2109:600 |
| Aaloc | 1138-1338:1 |
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