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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000146_pilon:489556..492759- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041048 ID=XLOC_041048|Name=XLOC_041048|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3204bp|location=Sequence derived from alignment at sc0000146_pilon:489556..492759- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAAGAAAGGAGAAAACGCCGCAGTTACTCAGTAGACATTGACCT
GGATCGCCTGTCGCAGCTTATCCCACTGAATCATCAAAGAAAGAAAAATT
TCAATAAAGCTTTATGGAAGGGAATAACGCAGAGGTACTACAATCTTTCT
AAACCTCCTCCGGACAGTAAGGTGAAGCATATCTTTCGGCAATATGTAAA
AACAATCAGAGAAACCCATTCACCAGTGGCCAAATTGTACTGTGACGAGA
TTGAAGATGAAACCAATACTCCAAATCCTCAAGCAAGCTCCAGAATCACT
GAACCGTACGACCAGACCGTGAAGCAGACCGTGGAGAAAGTTGAAGAACT
CTTTACCCCTGTGAAAGACATCGATCAGGAGATAAAAAAAGTTGAGAGGA
TTTCATTAAACCATGACTCCGTGACATTAGACAGAATTGAACGCTTAGCA
GCAACAATAGTCTCGAAAACAGCGGTAGAGCTGACTAAATATGCCACAGA
AAGAATTTCAAATGGAAATCAAAATACAGAAGATCTATCAAATGCAAATC
TAATGAATATGAAAAATATAATCCGTGAAAATCAAAATAAAGAAGATCTA
TCAAATGCAAATCTAATGAATATGGAAAATATAATCCACGAAAATCAAAA
TGCAGAAGATCTATCAAATGAAGATTTAACGAATGAAAACATTGAAGCTG
GATTAGACCTAGCAACAAATGAATCCGAGAGCGACACTTCATCAGAATCA
AATCAAGGAAACAATAATCAAAATTTCTTCTTATCCGAGATAAGTTCGAC
AACTGCCAATCTTTTGACGTCAGCTCAAATTCCTCGAGATGGCATATTCA
CACATCAATTCAAGAAAACAAGCTTTCGCGAGAAACTTCCAAACAATTGG
ACTAAACTGAAGATAGTGCAATGTGGCAATTCCGCCTTTCGAAGATTTGA
AAATAAGTACAGAGAATATCTTCTCCCGCTGGTCAAAGAACATAACAAAT
ATTGTAACCTAATCATCAAAAGCCAAAGATTGAGGAAAAAGGATTCGAGG
AAGTCATCTAGTTGCCCATTTTGGAATTGCTATATACGTTGCAAAAGACC
CGAATGCAATTTTTCGGCTAAGGTCACGATCGAAAACGAGGAATGTAAAT
ATGCAACACTTCGCTTTTATGGAAATGTGAACCATGATATCCGGAAAACT
AGTGCTGACAATATCTCTGGCTCAAAAAGAAAAATCGAACATCAAAGGTT
CGAAAAAAATTTGAAGACCCCACCAAGTAAAGTATACGGAGAGAAACTGG
CAAAGATTGATCCAGAAGCATTTGCTGCTGGCAACAGAGAGGATGCAGGA
AGATCTTCAAAAGTGTATCAAAAAATTAAGTCAGAAGTTAGAAGCCCTCA
CACTAAAAAGGCCTTTCTTCACAGGAATGTTCAAGAAATAGCATCTAAAA
TCGAGAAAGAGGACCGCACTAAGGCACGAGAGAAGAAGAAGGCAAGAAAG
TTTTATGGGTATGTCCATGATGTCATGGTGGACAAGGAGGTGAGAATCAC
GTTAACGAATGAGGCGCTGATAAGGTTGTACAATGAAAAAAACAAGAAGG
ATATTATTTACCTAGATGCGACCGGAAGTGTCACTCTTCCACTTAAAGAG
TGCAAACGAATTCTTCTTTACTCAATTTGCGTCCGCCACCCATATGGTTT
AACACCACCTCTACCAGTGGCGCAATATTTATCAAGTTCTCATTCTGTAT
CGTCCATCCGGCAATTTCTAATATCGGTACAAGAAAAGGAGAAGCTTGTC
TTTAATTCAATTTCAACGCCGTCCCTTGTTCTGGTTGATTATTCCATGGC
AATTATTGTCGCTTGTGTGAGAGAATTTTGTGGAGAAACACTTCCCGAGT
ACATCAACCGAACATTCAAGATTATCACTGGGCATGAAAAAATGTTGACG
AAAACGTTGCTACATATTTGTTTCTCTCATATAACAAGAAGAAACAAATA
CATATTGGGAAGGTTGAAAATAAACAAAGAAACTACAATCCTCTGCATGC
ACTGGTTTTCAAGATTGACAGAATGCAGATTTCTTGGAGAGCTTGAATAT
TTAGTAAAGCTTGGTCAGATTGTATTTATGTCTCCAACAATTGATGCTGT
CAACTATGGAAAAACAGTCAATGAGGCGGTTGAAGAGATCGAAAAATCGA
TCAAACAATTCCCCCATATCGAAGAAGAGTTGAAAGAAACTTTGGAAGAA
ACAGCAGTGCACGAGAGCATCACCAACAGTTTTGAAGCTGATGAGGACAA
TCTTCTAGCGTCTCTCGAAGAAACAACGAAAAGCAAGAAAAATGAGAAAC
GTAAACCTGTAACAGAACTGTCCGGGTTCTGGGATGATGTACTATCGACT
TTTTCAGTGCAAGCAACAACCAATGAAGAGATCAACAACCAATTTTACGC
GCCAGGTTATTTTAACTTTATTTCTACTTACCGACTTCCGATGGCAACTC
TTTGGACTGGTCTCTGCCTTGGTAATTTGACAAGATTTGGAGCCAACAAC
CATGAAGAGCAACAACCTTCTGCTTCGAAATCAACATTGAAAAATAATAC
TACAACTGCCCAAGTTGAGGGATATTTCTCCAACCTGAAACGTCTGCAAG
GCTTACATCAGCCTATCCCAGCATTTATTGAAAACACTTACATAGATCTC
CAATGGCAGATGCGACAGTTTTATGATGGTCTTTTAGAGGGCAGGTCAAA
ATATGTTTTGGAGAGAACACCAAAGATTTCTGATGAAGATTTTCTTCCTA
ACAAATCTATTAAAGTTGAAGAGGGCTGGAAAAAAAGAGAGAAGCGGACC
GATTTGAATGAACAGGGGTTTTACCGATCCACCAGGAGGAAGACCCTGGA
TTTCAAACCTAAGCCAAAATTTGAAAGAACGAAAGAAGAATCTAGAAATA
TCTGTGCTGTCTGCAAAGAGGAGGATAATGACTTGTTTGAATGCATCATC
TGTCGCAACCCTTACCATGCACATTGCGCAGGAACAGATATTGCATACGC
CAGAGTTACGCCACGTTTTGTTTGCGACCGCTGTATTAAGTCTCGCTTCT
TACCGTTTACTGATTACATCGGGTTCAAAAACGAAGAAGAAACAGACATC
GCAGTTTTGGAGTTTCTTTGGAATTCGAAGGAAAAGGAAGAAAAAGAAGT
TCTG Coding sequence (CDS) from alignment at sc0000146_pilon:489556..492759- >XLOC_041048 ID=XLOC_041048|Name=XLOC_041048|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6408bp|location=Sequence derived from alignment at sc0000146_pilon:489556..492759- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAAGAAAGGAGAAAACGCCGCAGTTACTCAGTAGACATTGACCT
GGATCGCCTGTCGCAGCTTATCCCACTGAATCATCAAAGAAAGAAAAATT
TCAATAAAGCTTTATGGAAGGGAATAACGCAGAGGTACTACAATCTTTCT
AAACCTCCTCCGGACAGTAAGGTGAAGCATATCTTTCGGCAATATGTAAA
AACAATCAGAGAAACCCATTCACCAGTGGCCAAATTGTACTGTGACGAGA
TTGAAGATGAAACCAATACTCCAAATCCTCAAGCAAGCTCCAGAATCACT
GAACCGTACGACCAGACCGTGAAGCAGACCGTGGAGAAAGTTGAAGAACT
CTTTACCCCTGTGAAAGACATCGATCAGGAGATAAAAAAAGTTGAGAGGA
TTTCATTAAACCATGACTCCGTGACATTAGACAGAATTGAACGCTTAGCA
GCAACAATAGTCTCGAAAACAGCGGTAGAGCTGACTAAATATGCCACAGA
AAGAATTTCAAATGGAAATCAAAATACAGAAGATCTATCAAATGCAAATC
TAATGAATATGAAAAATATAATCCGTGAAAATCAAAATAAAGAAGATCTA
TCAAATGCAAATCTAATGAATATGGAAAATATAATCCACGAAAATCAAAA
TGCAGAAGATCTATCAAATGAAGATTTAACGAATGAAAACATTGAAGCTG
GATTAGACCTAGCAACAAATGAATCCGAGAGCGACACTTCATCAGAATCA
AATCAAGGAAACAATAATCAAAATTTCTTCTTATCCGAGATAAGTTCGAC
AACTGCCAATCTTTTGACGTCAGCTCAAATTCCTCGAGATGGCATATTCA
CACATCAATTCAAGAAAACAAGCTTTCGCGAGAAACTTCCAAACAATTGG
ACTAAACTGAAGATAGTGCAATGTGGCAATTCCGCCTTTCGAAGATTTGA
AAATAAGTACAGAGAATATCTTCTCCCGCTGGTCAAAGAACATAACAAAT
ATTGTAACCTAATCATCAAAAGCCAAAGATTGAGGAAAAAGGATTCGAGG
AAGTCATCTAGTTGCCCATTTTGGAATTGCTATATACGTTGCAAAAGACC
CGAATGCAATTTTTCGGCTAAGGTCACGATCGAAAACGAGGAATGTAAAT
ATGCAACACTTCGCTTTTATGGAAATGTGAACCATGATATCCGGAAAACT
AGTGCTGACAATATCTCTGGCTCAAAAAGAAAAATCGAACATCAAAGGTT
CGAAAAAAATTTGAAGACCCCACCAAGTAAAGTATACGGAGAGAAACTGG
CAAAGATTGATCCAGAAGCATTTGCTGCTGGCAACAGAGAGGATGCAGGA
AGATCTTCAAAAGTGTATCAAAAAATTAAGTCAGAAGTTAGAAGCCCTCA
CACTAAAAAGGCCTTTCTTCACAGGAATGTTCAAGAAATAGCATCTAAAA
TCGAGAAAGAGGACCGCACTAAGGCACGAGAGAAGAAGAAGGCAAGAAAG
TTTTATGGGTATGTCCATGATGTCATGGTGGACAAGGAGGTGAGAATCAC
GTTAACGAATGAGGCGCTGATAAGGTTGTACAATGAAAAAAACAAGAAGG
ATATTATTTACCTAGATGCGACCGGAAGTGTCACTCTTCCACTTAAAGAG
TGCAAACGAATTCTTCTTTACTCAATTTGCGTCCGCCACCCATATGGTTT
AACACCACCTCTACCAGTGGCGCAATATTTATCAAGTTCTCATTCTGTAT
CGTCCATCCGGCAATTTCTAATATCGGTACAAGAAAAGGAGAAGCTTGTC
TTTAATTCAATTTCAACGCCGTCCCTTGTTCTGGTTGATTATTCCATGGC
AATTATTGTCGCTTGTGTGAGAGAATTTTGTGGAGAAACACTTCCCGAGT
ACATCAACCGAACATTCAAGATTATCACTGGGCATGAAAAAATGTTGACG
AAAACGTTGCTACATATTTGTTTCTCTCATATAACAAGAAGAAACAAATA
CATATTGGGAAGGTTGAAAATAAACAAAGAAACTACAATCCTCTGCATGC
ACTGGTTTTCAAGATTGACAGAATGCAGATTTCTTGGAGAGCTTGAATAT
TTAGTAAAGCTTGGTCAGATTGTATTTATGTCTCCAACAATTGATGCTGT
CAACTATGGAAAAACAGTCAATGAGGCGGTTGAAGAGATCGAAAAATCGA
TCAAACAATTCCCCCATATCGAAGAAGAGTTGAAAGAAACTTTGGAAGAA
ACAGCAGTGCACGAGAGCATCACCAACAGTTTTGAAGCTGATGAGGACAA
TCTTCTAGCGTCTCTCGAAGAAACAACGAAAAGCAAGAAAAATGAGAAAC
GTAAACCTGTAACAGAACTGTCCGGGTTCTGGGATGATGTACTATCGACT
TTTTCAGTGCAAGCAACAACCAATGAAGAGATCAACAACCAATTTTACGC
GCCAGGTTATTTTAACTTTATTTCTACTTACCGACTTCCGATGGCAACTC
TTTGGACTGGTCTCTGCCTTGGTAATTTGACAAGATTTGGAGCCAACAAC
CATGAAGAGCAACAACCTTCTGCTTCGAAATCAACATTGAAAAATAATAC
TACAACTGCCCAAGTTGAGGGATATTTCTCCAACCTGAAACGTCTGCAAG
GCTTACATCAGCCTATCCCAGCATTTATTGAAAACACTTACATAGATCTC
CAATGGCAGATGCGACAGTTTTATGATGGTCTTTTAGAGGGCAGGTCAAA
ATATGTTTTGGAGAGAACACCAAAGATTTCTGATGAAGATTTTCTTCCTA
ACAAATCTATTAAAGTTGAAGAGGGCTGGAAAAAAAGAGAGAAGCGGACC
GATTTGAATGAACAGGGGTTTTACCGATCCACCAGGAGGAAGACCCTGGA
TTTCAAACCTAAGCCAAAATTTGAAAGAACGAAAGAAGAATCTAGAAATA
TCTGTGCTGTCTGCAAAGAGGAGGATAATGACTTGTTTGAATGCATCATC
TGTCGCAACCCTTACCATGCACATTGCGCAGGAACAGATATTGCATACGC
CAGAGTTACGCCACGTTTTGTTTGCGACCGCTGTATTAAGTCTCGCTTCT
TACCGTTTACTGATTACATCGGGTTCAAAAACGAAGAAGAAACAGACATC
GCAGTTTTGGAGTTTCTTTGGAATTCGAAGGAAAAGGAAGAAAAAGAAGT
TCTGATGTCAAAAGAAAGGAGAAAACGCCGCAGTTACTCAGTAGACATTG
ACCTGGATCGCCTGTCGCAGCTTATCCCACTGAATCATCAAAGAAAGAAA
AATTTCAATAAAGCTTTATGGAAGGGAATAACGCAGAGGTACTACAATCT
TTCTAAACCTCCTCCGGACAGTAAGGTGAAGCATATCTTTCGGCAATATG
TAAAAACAATCAGAGAAACCCATTCACCAGTGGCCAAATTGTACTGTGAC
GAGATTGAAGATGAAACCAATACTCCAAATCCTCAAGCAAGCTCCAGAAT
CACTGAACCGTACGACCAGACCGTGAAGCAGACCGTGGAGAAAGTTGAAG
AACTCTTTACCCCTGTGAAAGACATCGATCAGGAGATAAAAAAAGTTGAG
AGGATTTCATTAAACCATGACTCCGTGACATTAGACAGAATTGAACGCTT
AGCAGCAACAATAGTCTCGAAAACAGCGGTAGAGCTGACTAAATATGCCA
CAGAAAGAATTTCAAATGGAAATCAAAATACAGAAGATCTATCAAATGCA
AATCTAATGAATATGAAAAATATAATCCGTGAAAATCAAAATAAAGAAGA
TCTATCAAATGCAAATCTAATGAATATGGAAAATATAATCCACGAAAATC
AAAATGCAGAAGATCTATCAAATGAAGATTTAACGAATGAAAACATTGAA
GCTGGATTAGACCTAGCAACAAATGAATCCGAGAGCGACACTTCATCAGA
ATCAAATCAAGGAAACAATAATCAAAATTTCTTCTTATCCGAGATAAGTT
CGACAACTGCCAATCTTTTGACGTCAGCTCAAATTCCTCGAGATGGCATA
TTCACACATCAATTCAAGAAAACAAGCTTTCGCGAGAAACTTCCAAACAA
TTGGACTAAACTGAAGATAGTGCAATGTGGCAATTCCGCCTTTCGAAGAT
TTGAAAATAAGTACAGAGAATATCTTCTCCCGCTGGTCAAAGAACATAAC
AAATATTGTAACCTAATCATCAAAAGCCAAAGATTGAGGAAAAAGGATTC
GAGGAAGTCATCTAGTTGCCCATTTTGGAATTGCTATATACGTTGCAAAA
GACCCGAATGCAATTTTTCGGCTAAGGTCACGATCGAAAACGAGGAATGT
AAATATGCAACACTTCGCTTTTATGGAAATGTGAACCATGATATCCGGAA
AACTAGTGCTGACAATATCTCTGGCTCAAAAAGAAAAATCGAACATCAAA
GGTTCGAAAAAAATTTGAAGACCCCACCAAGTAAAGTATACGGAGAGAAA
CTGGCAAAGATTGATCCAGAAGCATTTGCTGCTGGCAACAGAGAGGATGC
AGGAAGATCTTCAAAAGTGTATCAAAAAATTAAGTCAGAAGTTAGAAGCC
CTCACACTAAAAAGGCCTTTCTTCACAGGAATGTTCAAGAAATAGCATCT
AAAATCGAGAAAGAGGACCGCACTAAGGCACGAGAGAAGAAGAAGGCAAG
AAAGTTTTATGGGTATGTCCATGATGTCATGGTGGACAAGGAGGTGAGAA
TCACGTTAACGAATGAGGCGCTGATAAGGTTGTACAATGAAAAAAACAAG
AAGGATATTATTTACCTAGATGCGACCGGAAGTGTCACTCTTCCACTTAA
AGAGTGCAAACGAATTCTTCTTTACTCAATTTGCGTCCGCCACCCATATG
GTTTAACACCACCTCTACCAGTGGCGCAATATTTATCAAGTTCTCATTCT
GTATCGTCCATCCGGCAATTTCTAATATCGGTACAAGAAAAGGAGAAGCT
TGTCTTTAATTCAATTTCAACGCCGTCCCTTGTTCTGGTTGATTATTCCA
TGGCAATTATTGTCGCTTGTGTGAGAGAATTTTGTGGAGAAACACTTCCC
GAGTACATCAACCGAACATTCAAGATTATCACTGGGCATGAAAAAATGTT
GACGAAAACGTTGCTACATATTTGTTTCTCTCATATAACAAGAAGAAACA
AATACATATTGGGAAGGTTGAAAATAAACAAAGAAACTACAATCCTCTGC
ATGCACTGGTTTTCAAGATTGACAGAATGCAGATTTCTTGGAGAGCTTGA
ATATTTAGTAAAGCTTGGTCAGATTGTATTTATGTCTCCAACAATTGATG
CTGTCAACTATGGAAAAACAGTCAATGAGGCGGTTGAAGAGATCGAAAAA
TCGATCAAACAATTCCCCCATATCGAAGAAGAGTTGAAAGAAACTTTGGA
AGAAACAGCAGTGCACGAGAGCATCACCAACAGTTTTGAAGCTGATGAGG
ACAATCTTCTAGCGTCTCTCGAAGAAACAACGAAAAGCAAGAAAAATGAG
AAACGTAAACCTGTAACAGAACTGTCCGGGTTCTGGGATGATGTACTATC
GACTTTTTCAGTGCAAGCAACAACCAATGAAGAGATCAACAACCAATTTT
ACGCGCCAGGTTATTTTAACTTTATTTCTACTTACCGACTTCCGATGGCA
ACTCTTTGGACTGGTCTCTGCCTTGGTAATTTGACAAGATTTGGAGCCAA
CAACCATGAAGAGCAACAACCTTCTGCTTCGAAATCAACATTGAAAAATA
ATACTACAACTGCCCAAGTTGAGGGATATTTCTCCAACCTGAAACGTCTG
CAAGGCTTACATCAGCCTATCCCAGCATTTATTGAAAACACTTACATAGA
TCTCCAATGGCAGATGCGACAGTTTTATGATGGTCTTTTAGAGGGCAGGT
CAAAATATGTTTTGGAGAGAACACCAAAGATTTCTGATGAAGATTTTCTT
CCTAACAAATCTATTAAAGTTGAAGAGGGCTGGAAAAAAAGAGAGAAGCG
GACCGATTTGAATGAACAGGGGTTTTACCGATCCACCAGGAGGAAGACCC
TGGATTTCAAACCTAAGCCAAAATTTGAAAGAACGAAAGAAGAATCTAGA
AATATCTGTGCTGTCTGCAAAGAGGAGGATAATGACTTGTTTGAATGCAT
CATCTGTCGCAACCCTTACCATGCACATTGCGCAGGAACAGATATTGCAT
ACGCCAGAGTTACGCCACGTTTTGTTTGCGACCGCTGTATTAAGTCTCGC
TTCTTACCGTTTACTGATTACATCGGGTTCAAAAACGAAGAAGAAACAGA
CATCGCAGTTTTGGAGTTTCTTTGGAATTCGAAGGAAAAGGAAGAAAAAG
AAGTTCTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146_pilon | genome | sc0000146_pilon:489556..492759 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-3204:3205 |
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