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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000017_pilon:937677..944922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041917 ID=XLOC_041917|Name=XLOC_041917|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7246bp|location=Sequence derived from alignment at sc0000017_pilon:937677..944922+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCGGAACCGATCCCTATAGAGAGTGCGTGCGTGAAGTGCTTGCA
GCAATCAAGACCTACATGGAGGTTTTtcgggaaaatcgggaaaatcggaa
aaaatcCGGAACGGGATtttgtgaaagtgaaagtgattttgaattttcga
gGATCCAGAAATAATTTCAGccaccaagcaagaagaccagaccaccaaca
accaacaaccaaggtccagacaagccacaaTTTATCTTACCAATAGAAAA
ACTGTGTCAACTTAGATGTAACTTGAGGATGGGAACAAGACCACCAAGAT
GGCTGAACTGTCCCAGGAAAAGTGTGATTATAAGtggtaaatttttattt
tttctacagtgcgtcacaaacagccatataaacaaaactcaacattctca
caaaagttgtctttttgatttcccaaacattcgtctcaagcgttcccttc
cacaataatttatgtaattgcaattgcggtcagtccacagtcggcttcaa
catatacacatgtttttatttacgtgaccgaagtgcctactaaaacaatc
cgggggtaaatagcgaagtaacacagcagattattcgtaagtatcttttg
acattgacaatcaaatacaatatattatactatatttccttaattcaaaa
atcaaaaattcatttttcattcgcgaaaaataaaaataaaagaataatga
attaatattacatactaagacgcccccgtcttttactctcatttaatttc
caatctcggcacgtgcaaaacgcccgtccgcccaatatccacccaatcag
cttaaattcactttaattgtccagacgatctcaatcgaacggaatcgacg
atcgaaccagtcgaaccaaatcgaacgcaatcgaccgattgaaattcgat
tgtcgaacgcaatcgaatctcaatcgaatattaccgcgattttcagattc
aattgatattcgattgcgttcgattgatgtttgaatgcgttcgattgcat
tcgatcgtcgattcattgacccccggattgttcatcgcataatttctacg
ggaaatcgaaagtaatttcattcggcttgtgatgtttgagagcttggatg
ttgggaagctgcaagactAAATCCAgatgatctcaatcgaacggaatcga
cgatcgaaccagtcgagcaacaatcgaaccaatcgaatattacccagaat
tttgacgttcgattgcgttcgacaatcaaatttcaattggtcgattgcgt
tcgatttggttcgattggttcgatcgtcgattccgttcgattgagatcgt
ctggtaataattacaaaaacaaaaagtttgatacttcatttgtgaaatat
tcaataaattcctggtttcaattttcagtgggcgttcttctagggcttcg
tttatcgcgtaatttttgcgtcacacaaactttcttggccgctcgtaata
attatacattgccaaatttggttctccattgtcgagtcaggatcgatggt
gacgtcacctaagcataaaaaagaaaggatttcgtcagttttatgcatat
attaatttgcgagatattctattcgccgcgcgagcgcacttttcgtagac
tagtcggagtactttcttttactcgcgggattgatggtaacttttcatct
tcgttatttttaaaatgaagcacaaccgaaaaaaaacgaaacttcagaaa
gttgcgtatttccagtgagtaaacgactctgacaattaacaaaattgatg
atgatgattttttttcggtcaggccaatgtctcgtattgggggttctagt
cttgagcccaaagcctacgcaggattgcagcgtttgggtaaacgagacaa
aactctaaaaaagctggtgttttgacgcgcttccgtgctctcgaaatatc
gcggtttgaGACGCACTGTTCTAGCTAGATGTGTTTTCCTGTTCCTGGCG
GCCTCTGCAGAACTTTTTTAGAACAAGGCAGTGAAGTTCCAAAGCTTTAA
ACCAAGCGATCGGGCTCGATAGGATCGAAAATCAGAACGAATCAAGAAAA
AGATCGATACCGTAAGTCAGACCTGCCAACTTCAGATGTTCATTTtgcgt
gagataaaaattttgaagcaaaatccgAAATCTTAGCcccatttttccaa
ttttttgacaTCAGAAAACGGagaatgttttccaaaaaatcaaattttct
gaaaatccgAAAAACAGGGCGGGACACCCCTCTAAAGACGACAcgggatc
tgtaaaataatcaaaacaaaccttgaatgaaattcttggtatcattgggc
cattccagaaaaaagaaattaccccctataatggatgacatcaatttttg
aaataaattttggcacggaattccaggcaaactttaaagagaaagtatcg
gaattccatgaattttacttaattttgcattaaagtattggaattccatg
atttttttaggttacagtaatggaattccacggttttgataggtattttg
taaatttgttatatacggaaattccggactttcttgaaagcaatttggtA
CGGAAATTCCAAGTCGTCCATTgggggggtaacgaataaaaactggaatg
gcccattcttatcaaacaagttcatgCATCAAattagaagttcagtaaac
attgcaatcctttcaatagacctttttttaaagaggcagccATGTTGAAT
AATTATGTACTCCAGCATAAAAACAAAgatacagccatgcataatttttt
aaatatgcatgatacagtaattatgcatggctgtatcattgtttttatgc
tggagtacataattattcaacatggctacctcttaaaaaaaaggtctatt
aaaaaagcagccaaattataagcagttttacacaacacacgaaacacATG
CATGCAAACTTCCCCGTAACTTtatcgtgtccatcattaaaattttacaa
ctttagtacgcttcaagtcatgtgataaaaataattCGcgcgcttAGTCA
ACCTGGTTTCCCCGTCCTTAATATTTATTGCAAGCcaagcacacgctcta
ggcgctaagaggTCGCATTAAACCTCTAGGCGCCGCACCTAGCCACCCGG
CAGGATGGTTGGCGGTCAcatcaaattcataaggaaaccaggttcttttt
attatttacgGTTCAATGTagaaaggtctactaaaaaattccttgcgtgc
aaaatgttgttttgatttaggCATCTTCGTTAatagcatgctaattagtt
ttttagtgattactacatcgttaaaggtttcttttcaaacatatataagt
aataacacttcacatttctcatattatatcaacaatctgtgacgtgatag
ggagagtacaatttagtgattgattgatagctttggtatgtatttgttta
tgtttgattttttatttcgaagaccagctatgtcgaaataacaagacgta
tgtcgatattagacgattctacgGTAATGGATAGAGGATAGGATTGATAT
GTAATCAATTTAGAGAAtcgtttgaaaaaaaagattgataAGGGATCATG
GAAGTAtcaatactcaagattttttagaGCTCAGGGTACCTAAGGCACTC
TCCAATGGTCTCTTGAGGTTGCGCCCGTTAacgtaaatgttttttatgtt
tttggaaGCGTTTCGATATAGAAAATGAGGTGGGGCATTGTCATATGGTC
CAACTTGTTaaaaaaccgaaaaatttcgaaaaaacctAGCTCGTTTGTTT
GGATGGTGGACATTTACTCGTGGCAAAGAAATTCTCACCagaaaaatcat
catttcatgCTAAATGTTACTTTGCCATGACCATGTTTCTTTTTGATAGC
TTGGGCTGTTttgaaaccaaaacaaacaaacggCCCAAAGTTTATGCCTC
AGGTTCTCTTTGTTTGACAGCCTGCACGGTCCACaaatttttgggtgaaa
aagtttagaaattatctctgttattttttaaatgtaaactaTACAAGCCG
AAGCAAAAGTAAAGATGGCTGACAAAACAGCCATTGATTTTGTATGAAGG
TTTTGGGCTACACTGTCCTGAGGCTGAAACCCTGATTGGAAGAAGTCCTC
CTATCCTCCCCCTTTAAAGCTTTTCTTGAAAAGTCAGATTTTTCccttaa
gaaggggggggggctcacaCAGGGTTAGACTATGTAATCACCAtatcatg
ttgaataatttaaGGTTTTGCTTTTACTGAAATTTGCCCTTGCATATATG
TAAGGCAATCTATACATTACATGtcacaacaaaaaaacaactgaGAAAGG
CCACTGGATAGGTAAAAAAGTAGTAGTAGTTCCTATGTTTCCTAGGTGGC
CAGTCTCAACCGGGCTTTTGTGTGTTGTCTACGCAATTGTAAAGAAGAGT
AGACTGGGatgagaaagttttttttgcagCCATCACAAATTTCTACAACC
CTACCTAGGTGTgtccaggcaaaaaaaaataaaaattggaaaactATTTC
ACAAAGCATACaggaatgaaaaataaagacaGCCCAATCTAAATACTTTC
TACAATTATTTTtgtagaaattattttcaatgaaacaagttttttattaa
atcttgtttcaaaagcttttattctttgtttttagataaaTTCATTGCTT
TCAAGACCTTTCTGGATGGCAAATTCGACTCTCAAGTCCCTATGGAAAAC
ATGTTTCAATACCCTATGCTGAAATCTTATGTTTCTAGCAATAAGGTTTG
AatactttttatataatttCCTTTTTCATTACTTTGAAGACTAATTCATG
GTAAAAGATGAATCATAGACAATAAAGACCATTACGTGCTCTGTCAACAA
CTTTGGTCTGTTctaaattttggatatttttgcGACAAACAAACAGGAAG
TGGATATGAGAGAGAAGAGCAGCGAGAAAATTGAACCCTCTGAATCATCT
GGAATTGGCCCTATCGCTGTATAGATACCTACTCTAGGATAGGGAAATTA
CCACGCTTACCAGATACTGTTAATCCTGCGCTCGTGACACAACAGAGTTC
TTAGTATAGAGACGACGCTACTCGAACTAAACGGGAAAACATATTAGGTT
ATGGGAGTCCTGATTACTATTGATTACTATCAGCTTTAATATTGATGGCC
ATTTTGGTGCAATGAATGTTCTTTTCTCTACAGAAAGAGCTTGGGATGGT
ATTAGATCTGACCAACACAGGTCGGTTTTATGATCGCAAAATCGTGGAAA
CTGATGGTGTTCGATACTGTAAATTGCAATGCAGAGGGTAATGCTATAAC
TTTCCTTACTTTTTAATAAATTCTTTTACCAATAGAAAATTTGATCCACC
TGAATTGTAAAATGTACTCtcaagaaattcttgaaattcattCTGATAAC
ggttttgtataaaaaaaattttttttctacttctCATGATGAATAATGAA
TTATgttgtaaatttgaaaataggTTCAAGTCCTTTTGCTCTGAATTTGA
AAACATTCACATGTTACATACTTCTTTTTAAATGGAGACAAGCCTCTTTA
TTTTCCATCAACAATATGATAAATGTTTTGTGTTTGAGTGAGAACGTTGT
TAATCCTGCGAGTTCAGGCTGACACTCAAGAGTATTGACCTTAAGGCTGG
TGTAAAtcctttttgtttttgctgCGGACCTGATTCAGCAAAGcctaatg
ggtaatcaggaccctgcgcgctaatgacgacttataCTATTGGtccgatg
ttttgaaaatttttgaagattattgcgtctagccaacagaaagccATAAT
ACACGTAATGGAGCCGCACTCAGTCCTGATTATCCATGATCCATTTTGAC
AGTGAAATGGCCTATTCACAGGGCTGCTGAAATCTCAAATTTGCAGCTTT
TTATATCTCCGTTGGCTTTCATAATCACCCAAATCTGAATTACAATTTTA
TCATACTCATTTTCCATCTTTTTTACATTCAGACATGGAGAAGCACCTAA
TATCGACCAAACAAAAATCTTCCTTCGAATTTGTGACAACTTCTTTCAAA
AGAACCCTAACAAAATCATCGGTGAGTTCTTTAAACAATTCTGCAGGGGA
TATCAGATTGGCTGCAGACTCTCGAAATCCTTGAAATGTCCTTGATTTCT
TTCCTATCCGTGAAATTTTGGAGACCCTAAAATTATGAAGGTTTTCTGAA
GACTCTTGAACCAAGAAATGTGCACAGTTAAAACTCTAACTAAAAGggaa
gattttaaatttaaaaatgcaaAACTATCCCCATTACTTGAAGTAAAAAG
AATGTAAAGATTGGATTTCTATCACTAATTTTAAAATGCAATCTCCTTTT
GAAAAAGGGGCTCAAAATTTTTCACCTGTGACACGAGATATACATAAACT
CCTCTGTTACTTGagcatttttgaactttttgagaaaaaacataTACCAT
ATACCCCCTGTTAAGGAGGTTCATTCCCATTCCAAAGTGGTGATGTTTGA
TATGTGATGGAATTCCATAGTGatatacaaaaatcttttacaaaaataca
gCATTATACGGaaaaaattgcctggaattccaggtgGTTACATGATTTCC
AGCCATCAAGGGTTGGCAAGGggtattagttttttttctgtatAATCCTA
TTTGAAGCTGAAGATTTTATGTAAAAATGCAGgcaaattttcaggatttt
gagCTGCTacagtttttattttaaagattgaGTTTGAATTCAGTTCGAAG
AACAAAATAATCAACCCATGCTCTGTTAATTAGTTGAGAActattaaaac
acaaagaattaaccTCAGAATGGGCTTTTTCTGTTAATTAAGGGCCTAGA
ACATCGAATTTTTGTCATGATTATCTTGgctcatgtacaaaaatttggac
taagtttcaaaattcaagcaaagattGAGTTTCTGCCACTGCTATCCGGT
AGCAGAAAAGGCCTGGGAATTTCCCTGAAATGCTATAATGCTAAAATTTT
ACTAGCATTTCACCTTTGAAATTGAGATTCGTCATTTGTCATACAGAGGA
ATATTCAATGTTTTCCTATGACAAAAAGCCCAATCTTAATACAGAAcaga
attgaaagattttcaattttccaaggcACTTGTTTGAGATGgacctctct
ctctctctttacAAAGGTGTTCATTGTACTCATGGCTTCAACAGGACAGG
CTTTCTGATTGTCTCTTATCTTTGCGAGACTGAAGAATGGAGGTAT Coding sequence (CDS) from alignment at sc0000017_pilon:937677..944922+ >XLOC_041917 ID=XLOC_041917|Name=XLOC_041917|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1438bp|location=Sequence derived from alignment at sc0000017_pilon:937677..944922+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCGGAACCGATCCCTATAGAGAGTGCGTGCGTGAAGTGCTTGCA
GCAATCAAGACCTACATGGAGGTTTTtcgggaaaatcgggaaaatcggaa
aaaatcCGGAACGGGATtttgtgaaagtgaaagtgattttgaattttcga
gGATCCAGAAATAATTTCAGccaccaagcaagaagaccagaccaccaaca
accaacaaccaaggtccagacaagccacaaTTTATCTTACCAATAGAAAA
ACTGTGTCAACTTAGATGTAACTTGAGGATGGGAACAAGACCACCAAGAT
GGCTGAACTGTCCCAGGAAAAGTGTGATTATAAGtgATGGCTGCGGAACC
GATCCCTATAGAGAGTGCGTGCGTGAAGTGCTTGCAGCAATCAAGACCTA
CATGGAGGTTTTtcgggaaaatcgggaaaatcggaaaaaatcCGGAACGG
GATtttgtgaaagtgaaagtgattttgaattttcgagGATCCAGAAATAA
TTTCAGccaccaagcaagaagaccagaccaccaacaaccaacaaccaagg
tccagacaagccacaaTTTATCTTACCAATAGAAAAACTGTGTCAACTTA
GATGTAACTTGAGGATGGGAACAAGACCACCAAGATGGCTGAACTGTCCC
AGGAAAAGTGTGATTATAAGtgataaaTTCATTGCTTTCAAGACCTTTCT
GGATGGCAAATTCGACTCTCAAGTCCCTATGGAAAACATGTTTCAATACC
CTATGCTGAAATCTTATGTTTCTAGCAATAAGataaaTTCATTGCTTTCA
AGACCTTTCTGGATGGCAAATTCGACTCTCAAGTCCCTATGGAAAACATG
TTTCAATACCCTATGCTGAAATCTTATGTTTCTAGCAATAAGAAAGAGCT
TGGGATGGTATTAGATCTGACCAACACAGGTCGGTTTTATGATCGCAAAA
TCGTGGAAACTGATGGTGTTCGATACTGTAAATTGCAATGCAGAGGAAAG
AGCTTGGGATGGTATTAGATCTGACCAACACAGGTCGGTTTTATGATCGC
AAAATCGTGGAAACTGATGGTGTTCGATACTGTAAATTGCAATGCAGAGG
ACATGGAGAAGCACCTAATATCGACCAAACAAAAATCTTCCTTCGAATTT
GTGACAACTTCTTTCAAAAGAACCCTAACAAAATCATCGACATGGAGAAG
CACCTAATATCGACCAAACAAAAATCTTCCTTCGAATTTGTGACAACTTC
TTTCAAAAGAACCCTAACAAAATCATCGGTGTTCATTGTACTCATGGCTT
CAACAGGACAGGCTTTCTGATTGTCTCTTATCTTTGCGAGACTGAAGAAT
GGAGGTATGTGTTCATTGTACTCATGGCTTCAACAGGACAGGCTTTCTGA
TTGTCTCTTATCTTTGCGAGACTGAAGAATGGAGGTAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000017_pilon | genome | sc0000017_pilon:937677..944922 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-723:7169 |
| Aaloc | 556-642:5984 |
| Aaloc | 451-552:5184 |
| Aaloc | 343-450:4638 |
| Aaloc | 214-339:210 |
| Aaloc | 196-210:195 |
| Aaloc | 181-192:183 |
| Aaloc | 1-180:1 |
|
