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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000131_pilon:678772..684194+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043448.2 ID=XLOC_043448.2|Name=XLOC_043448.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5423bp|location=Sequence derived from alignment at sc0000131_pilon:678772..684194+ (Clytia hemisphaerica_ch_hm2_pilon)
CAtggttttatcaatatttctttttctgttgAATTCTCAGTGTGCTATTT
TCTTGCGAGTTCATgtgtcattttttctttgtgcgtctcactttgctcat
tttcagtttgttcaatcacatttttctcagttttcatttgcgtcatttca
gtttaagtattttataatttcaattttcaaattttcaaatagtcAATCCT
TGTCattatttacttttcaattcAATAGTTTGAACCTGTCAATCGTTACA
AACGTCTCAAGTTTTATATCCCGCCACATTCAAACAAGTAGTCGATCATT
CATCAAATTAATTCGTCGATTACATGTCAAGAAATCTTCGAAACGTTCCA
AGGATCGACTATCAAATTCTCCACTCAACTGGGAAACGTGtaatcaaacc
aaatcaaacgtcAATACGAACCACCAACAGGACAGTTAATATGTCCGTCG
AAATAATCAATTCAACGAAAATCGCCATTCAAGAGGTCACCGATGTCATT
GAGGAGAATCCAACCTCCACGTTGACCGACATAGATGAATCTATTCAACA
ACTGATGGGGCTACGTTTGCTCCTCAGAGAAAACGAGAACGCAATCCATG
CCGAAAACCCAGAACACGAGCTTCTCGTCTCGACAAAAGCATCTCTTCAA
TCAATCAGAGATTATGTACGTAAAATCAAAGACTCCAGAGCAAAACTCAG
ACAAATCGTGGACACAAAGATTCAACAACAAAACGATGGTAAGAAAGACG
CTCTACTCTTCTCCATCAAGGACACTACACGAACAGTCAACGACCTTATC
AAAGAATTCGAACAGAATACATCCAATCTCACCGATGAAGAGCTTATCCA
GATCAAATCCAGTCTTGCCAGCAGAGATAACCAAATCGACAGAATTGCCA
AGAAATATCAATCTATTCTGCTAGAAAAACCAGTTTCAACTCCTGAAACC
TTATTGGAAATTAAAACATTAGGAGAGAGGTATGAACTATTAATTACAAC
AAAGTCAAATTTTGTCGAACACTTAACCTCTTCTCTTGGAGATCGTGATG
TCTACAAACAAAAGCTCTTCTCAGCTGCCAAACTTAATATCGAAATTAGC
AAATTTAGTGGCTACGATGACGTCATAGACATTTATACTTTCAAAGACAA
TTTCAGTAAGGTCCACGAGAAATCAACACCAAAACATTTGTTAGGAGATC
TTCTAAAGAATAATTACCTACAAGAACCAGCTTTAGGTGTCGTCAAGATG
CTCACCGACATTGACGAGATTTGGTCACGCCTTAAATCAACATATGGTGA
CGTTATGATACTACTCAACCAAAAACTCAACCGACTGGCCAATCTCGATC
CTCTCTATCGGATGAAAGATCCTGAATCCACAGCCAACGCCCTCAACAAG
ATGGTCAATCTCCTCAAAGAGTTATCGACAACTGCAGAAACACACAAGAT
CGAGCAGTTCCTCTACTATGGAGGTGGTATCAACAAAATCTACTCGCTGA
TCGGAGATGCTAGATTATCTCGTTGGTTGACACAGATTTCAAACGAAACG
TTATCCCCCAAAGCTGAATGGAAGAGACTCATCATTTTCCTTGAATCAGA
GATGAAGATTCAGCAACAAAAGATGTTGATCAAAAAGCAAACCAACGAAC
CTCCAAAACAACCACCGAAACAACCACGTTCACATTATACTGATACAGAG
GTGAGTGATCCTACTTCATCCCCTCCTGACCAATCGAAATGTTTTATTTG
TGATTCGTCCGATCATATATTGACTTCTGGTCCACAGGGCACAAAATTGA
TTCAATACTTTGTGTGCAAAAAGTTCGTCGAAATGACACCTTCAAATCGT
TTTGCAGAACTCAAACGTAAAAACCTTTGCTATCAGTGCTTATTTCCAGG
AGCTCAAGCCACTACAGGAAAACATCGTGAAGGCAAATGTCAAAAGGTCT
TCACATGTCAACATCCGAGCCACGAGAAGTACACAATGAAGAAGCACATT
CTCGTTTGCAACGACCACAAGTCAGATCCCGGCAACCAAGAAGTACTGGA
ACAATTCAAATCGCGATGCATTGTCAAACGACCCAACATcccagaatttt
caaaaacgatATCGAACTACTACAcgtttcaatcttttccaatcCGTCCA
CAAAATGACGACTCAGCTTCAGGTATATATCAGCTTCAACAAATCATCAT
CAACTCAAAATCTTACCTGATCTTCTACGATTCTGGGTGCAGCGATTTTG
TTGTACGTGACCACGCGATCGATCAATTGGAATCGAGAGCCCGACTTCAA
GAAAAGGGACCTATCAAGCTTGGTGGTGTTGGCGACGTATCAACACTGTC
ATCCAAGGGCATCTACAGTATCGATCTACCAACCTTTGACGGCTCAAATG
TGACACTCACCGGTGTCGCTCTCAAGAAGATCACTTCAACATTTCCAAAT
TACCCTCTCGACTGTCAAGTCAAAGATGATATCCATGATGCATTTCGTCG
GAGTGGAGGGAATCCGTCAACTTTACCAAAGCTTCCATCATCTGTCGGAG
GTGACGTCGACTTTATGATTGGCATACGATACCTACGATACCACCCCAAG
GTGATCTTCCAAATGCCTTCAGGACTCACCATTTACAAATCATTGTTCAA
AAATCCAGATGGCAGTCGTGGTATAATTGGAGGACCACACGAAATATTCT
CAATGATCGAACAGCAATTCAAAGGAAGTGGTAAgaatactttcttttca
aatcaattaACAATTTACAAGTCTGGTTTTAGTGTCAACCCAGACGTACC
ACTCCTTTGTGCAAAACCCAACAAAAACCAATTCGACGAAGCAGAGACAG
CTGGTAGCATCATCAATTACCGATGTATGAAGTGTCGAGACTGCGAAAAC
TGCAAGACCAACGATTCCATAACAGCCATCAGTATTCGTGAAGAGATCGA
ACAAGATATCATCAACAAGTCAATCGAAGTCATACCAAACGAGAAGATCA
CTGTGGCGACTCTACCCTTCACACAAGATCCCAATATCAGACTACATCCA
AATCGAATGAAGGCCAAGAAGGTGTACGACCAACAAGTCAAGAAGTTATC
CTCTTACCCGAATGACAAACGTGACGTCATCGAATCTGAGGCTAAGCTCC
AAAAACTTGGCCACGTCGACTTCATCAGGAACCTTCATCCCAACGTTCAA
AACCAATTGGCACACAGCccaattcaaaactttataccATGGAGGGCAGT
TTGGAAAGCAAGCTCCGTCACAACACCTTGCCGAGTCGTTTTCGACGCAT
CACAACCAACAAACAGCGGCTACAGTCTTAACTCAATTCTCGCAAAGGGC
ACCAACGGTATGAATAAACTTGTCGAAATCCTCATTCGCTGGTACTGTCA
CAAAGTCGCATTTCATACTGACGTAACCAAAATGTACAACGCAATCAAAC
TCGATCAAAGCCAATGGTGCTACCAACGATACTTGTGGAACAACGATCTT
CATCCCAACCAACCTCCGGaagaaaaagttatcaaaaccTTGATTTATGG
GGTTAAGTCGAGCGGCAACCAGGCAGAGCGAGCAATACGACAAACGTCAG
CACTATCCAAAAACGAATTCCCTGAGATCGATCACATTGTCAACTTCGAT
CTCTATGTCGACGACTGTATCACTGGAGAAGACAATCTCAAAACCGCCAT
GGAAAGAGCCGACCAAATGGAAATCTCACTCGGTAGAGGTGGATTCGGAT
TAAAAGGCTTCACCTTCAATGGCAGCGATCCTCCAGAAGCACTCTCCAAA
GATGGCAAATCAATCGGTGTAGGAGGAATGATTTGGTATCCTAAAGATGA
CGAAGTATCGATCGACGTATCCGAACTAAACTTCGCCAAGAAACGACGAG
GAAAGAAACCAGATGAGAAAGTTGGTATCGTTCCATCCACCCTCACAAGG
CGTCATTGCGTATCCAAGGTGCACGAGCTATTCGACATCACTGGGAAGAT
CACACCAATCACTGCGTCACTCAAGATTGATCTCCACAACATCGTACAAC
GTGGTTTGAAGTGGGACGATGCCATACCGGACAACCTTAGAGCCATATGG
GAATCCAACTTCGAAATGATTCAAGAGATAAAATCAATTCGATACGCCAG
AACCATCGTGCCTAATGATGCAGCCAACTTAATGATTGAGACCATCGACT
TCGGTGATGCAACCAAAGAGATGGCAGCCGTTGCTATCTATGCCAGAATA
CTACGTTTAAACGGTGAATATTCGTGCCAACTCGTATTTgctcgatcaaa
gattttgtcaTCATCAACTCAACCTCGAGCTGAACTCGAAGCAGCTGTCC
TCAACACTCATACTTCCGAAGTCGTCAAACGTGCATTGAAGTCCAAACAC
AACGGATCAATCAAATTGACAGACAGCACCATCGTTCTACACTGGATCAG
TAATGATGAAATCTCCCTCAAGCCATTCGTTCGAAATCGAATAATCGAAA
TCATTCGACACACAACTCGTGAAGATTGGCAACACATCGACACAAACAAC
ATGCTCGCAGATATCGCAACTCGTAAAGGTgcaacaatagacgatatcag
cAGCAAATCAACATGGATCAATGGGCACTCCTGGCTCAGGGGTGACAAAT
CAACCTTCCCAACCAAAACTGTAAgtcaaattaatttcaattCTACTGAC
TTATGTGAAATCAAGAATGAGGCAATTCAAGGCAGTCGTGAAGTTTACTT
GGCATCAATGAAGATTGTGTCCGAAGTTCGAGATCACTATTCATGCTCCA
AATATCTGATTGACCCAAATAAGTTTCGTTTTCAAAAGGTCATCAGAATA
CTTGCTCAAGCCATTAAATTTCTACAACTACTTAGATCTTTAGTAGCTCT
ACGTAAACAATCATCTGCACCAACCTACGAATTCAAATCAAATGGACGAC
TGACTGACGATCAACTCAAGCAAGCCGAGACGTACTTCTGGCGCAAGGGT
ACTGAAGAGGTGAAACAGTTCGTCAGTAAAGAGAAGTACAAACGCATATC
AACAGAGATTGACGGCATCCTAACGTATACTGGTCGTATCATGCCAACAG
ACGAAATCAACGTGATCACTCCGATGACGAAAGTGATGAAAGATCTACAT
CAAACGACCTTCTGCGTTCCAATCATCAGCAAACATTCACCCATCGCCTA
CGCCGTCCTGAGTGACGTTCACTGGCACAACAAAGTCGTCAAACATTCCG
GCATCGAAGCTACGTTACGCTATGCATCCCAGAAGGCATTCATCATTGAA
GGACGCGAAGTTGCAAAGAAGGTCAAAGCATCTTGCAAATTGTGTCGTTT
CCTCGAAAAATCGAAAGTCAAAGTCAGCATGGGCAAAACACCAAGTTGTT
GCAGAACGATTGCTCCTGCTTTC Coding sequence (CDS) from alignment at sc0000131_pilon:678772..684194+ >XLOC_043448.2 ID=XLOC_043448.2|Name=XLOC_043448.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000131_pilon:678772..684194+ (Clytia hemisphaerica_ch_hm2_pilon)
CAtggttttatcaatatttctttttctgttgAATTCTCAGTGTGCTATTT
TCTTGCGAGTTCATgtgtcattttttctttgtCAtggttttatcaatatt
tctttttctgttgAATTCTCAGTGTGCTATTTTCTTGCGAGTTCATgtgt
cattttttctttgtCAGACGAAATCAACGTGATCACTCCGATGACGAAAG
TGATGAAAGATCTACATCAAACGACCTTCTGCGTTCCAATCATCAGCAAA
CATTCACCCATCGCCTACGCCGTCCTGAGTGACGTTCACTGGCACAACAA
AGTCGTCAAACATTCCGGCATCGAAGCTACGTTACGCTATGCATCCCAGA
AGGCATTCATCATTGAAGGACGCGAAGTTGCAAAGAAGGTCAAAGCATCT
TGCAAATTGTGTCGTTTCCTCGAAAAATCGAAAGTCAAAGTCAGCATGGG
CAAAACACCAAGTTGTTGCAGAACGATTGCTCCTGCTTTCCAGACGAAAT
CAACGTGATCACTCCGATGACGAAAGTGATGAAAGATCTACATCAAACGA
CCTTCTGCGTTCCAATCATCAGCAAACATTCACCCATCGCCTACGCCGTC
CTGAGTGACGTTCACTGGCACAACAAAGTCGTCAAACATTCCGGCATCGA
AGCTACGTTACGCTATGCATCCCAGAAGGCATTCATCATTGAAGGACGCG
AAGTTGCAAAGAAGGTCAAAGCATCTTGCAAATTGTGTCGTTTCCTCGAA
AAATCGAAAGTCAAAGTCAGCATGGGCAAAACACCAAGTTGTTGCAGAAC
GATTGCTCCTGCTTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131_pilon | genome | sc0000131_pilon:678772..684194 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 85-408:5100 |
| Aaloc | 1-81:1 |
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