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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000287_pilon:21416..28164+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001445 ID=XLOC_001445|Name=XLOC_001445|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6749bp|location=Sequence derived from alignment at sc0000287_pilon:21416..28164+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtttgaaggaaaaaaCATACACTTATCACCGATCGATGGCAAACCATT
ATGCAGTTTCAGCAAGAAGCTTTGTCGACAAAGACGTCTTCACAATTACG
CGTTTTGTATACGGCATATTTTGGAAGATACTGATTCACCTTTCAAACAA
TGTCCTTATCAAACGAAGTCAGGAGATATTTGTATCAACGCTGTACCTGT
TGCTGCTGCAAGAGAGTATGTCTATTTTGCTATTCATTTGATCTTTATAC
GCCCGACAGTGCcagtattgattttttttttgttattacagtgaagtctc
tataactcgaacacgcacggggaaaaCAAATCTTTTTCGAATTATGTAGT
AAggcttataaggcattgttaactgaagggaccaaaCCTGTAAAacctgt
tcgagttaaagagacattagAGTTATAtgggttcgaattaaagaggttCC
ACAATATAAGATCTTTGCCTTAAGAAGGTCACCCTTTCGTTTGATAATTC
GGGAATTTTAGATTTCGTAGCAATACTTTATTGATTGTTCTCTTTTGATA
TTCATATATTTAGATATTGCAATAAGCATATGCTCATGATGGGGCTACAA
CCAAAGACTACCAAAACTCAAATAGACAAGAAACCTGTTACTACTACAGT
TAAGAAAGCATGTTCCAAGGCTATCAAAAGTAAAATCTCCACAAATAGCa
gtaaaaaagtgatgcatttgATGGAAACacttcaaaaagaagatgcaaCG
AAAAGTACGCATGCGCGTAAACGACAAAAATCATATGACCGTTATTTGTC
AATGTCGGTGATGAGGCGTCATATTTGGAGCAAACAACCTCGCTCTGATG
TCATGAAAGAATTGATTGAAAACAAGAAGTATTTTagaaagacaaagaaa
aagaagacgcTGACTAGCTACAGTAAGAAATTGTATTCGGTAAACTGATA
CTTGCTATTGTTTTACTCTAGATTGATATTATTTATTCCACAATATTGTT
TTTATGCCTTCGGCTATTGTCGGCTAAGGATCCTTATCTATGCTAGAGGT
GACCTCTCAGAGTTGAATCTTTTCAATGTGTTTTATTGGTTTTGGAAGTA
TGTATTTGTTTGCACGCGTAATTCATCGATAAATTTCTAAGAGCCGTGCT
TGTGTACTTCATAACGATAAAGGTTGGAAAACGAAGGCAAATGTTGGTTA
ACCTATTAAGTGCCACTGAAATCATGTGAGGTCCGCTCGAAATTTCGGTT
CTGCACCTGTGCTGGTAAGTCTTGGGCCTAGGAGCGCTGCGACGGCATTT
TCTTAGTAGAGGTAATGGTAATTTTAGTGGGTTgatgttatttttgaaaa
gtctctttttggacctaccccggtggaggtcctataaattaacctgtgtt
tgttcgtccgttcgtccgtccgtttgtctgttaccaacttttctcagggt
tgaatcataggaatcttttgatttttggtacaaaggtgcaaaatggtagt
ggccaaaatgtgacggagcccgattttcgaaaaaaaaaattttgggccaa
tttgggccaaaaaacggctaaaaaacgggttttttagactttgtgaaaaa
ttgggtcattaattttttctgattttttgtatgaaagtagggtaccatca
taggtaaaagatggctcaagcagatttttgcaaaaaaattttgttggctc
aaaaaacgcatgtttatctataagaatcactattaataagcatacatcaa
tgttcttagtcaaattactcaatttttttatgagatagatgttttttttg
ctcatgagggcttacttctagagagtatgtgtgtttagacatgaaatttt
ggttgcttagcgtgtttttaaagaaaaactggcCGAATtcggtatttttt
tataagcacattatcaattacttaggtattagcttttcttgagattagct
ctttcattctttgtgattttttgcacaaagatgcataactttaaaccctt
aaatgtgacggagcccgatttccgaaaaaaaatgtttttgggcaaatttg
ggccaaaaaacggctAaaaaaagggttttttggactttgtgaaacattgg
atcattgtttttttctgattttttctgattttttacatgaaagtaggtaa
aagatggctcgagcagatttttgtaaaaaataatttttcagctaaaaaac
gcatctttatttataagaatcactattaatgaGCATACaccaatgttctt
agccaaattactcaattttttaataagaaagatgtttttttttgctcacg
aagtcctgaatatgaaagattatttcaagagcatgaaattttggtttcta
gacgttttttttataagaaacaaacgactaattttagtAGATCGTCCCTA
Tttctgttctgaatgattgtttaacagtcatgctcacgtagatatcaatt
atatttgttaaatgcataaccaggtaggtccataaaagtatcacttgtct
cTTTTCATTTCAGCTCTGGGAACATCCGAAGATGAAAGTGACAGCTTCAT
TGAATCATTTCAACAACAATTTGATAACGATGGCAGGTAATgcactctct
ctctctttctctctagAAACTCGACAATGTATTTTCTTTACTATGGTAAA
GTTTTAtatgaaaattattgaaatcaaACAATATTACGCAGTAACTCGCA
TTTAAGATAAACTCTGATATTTCGTCCTAATGTCCATGTGTTGTGGGGAA
AGCAACGAAACTTTTAATGTGTAAGATAATCGAAGATTCCAGGTCAATCG
TATTGCTAATTTTTTATCGATTTgctttacaattttttctgcaAACAGAC
AAAATATTCCTCTGAGTCTCTGTTACTCTAATCCTTAGTTCAACAACACA
CAATagctttattttcattttcaatttgacaaataagatctttaaaaatg
atgttgacaaaataatgatcttcTTATCTCCTCTGGTCACGTTTTTCAGT
CATAATTCATCAGCTGAGAAGTTATTGACTCAACTGAAACACCAACATGT
TCAACTGCAAAACATtgtcaaagaaaaaatgaaaagtacttCACTCTCAT
ATTCAGTCCTATCAACTCTGGTGGAAGCAAGTCGTGAGAATGTTACGGAA
ACGGCAAACATTCTTACGGACGGTAACTCGAAAAACAAAGTTTATCAGTA
AGTATATTATAAAGTGTATTTAATGGAAAAATATACCGTATTTCCTcaca
atacacgcttttttatataagaataacttctataagtttatcagggtgag
attttagagttagaacaataggtctattgtttagaacaatagaaaaataa
gaataatgctcacccgcAGCCatagtacactattcttatttaaaaaaagc
gtgtaagcgCCGCAGCACCTATTTTCTTCTTGTGGTTTTAGGTGGGGCAC
TTGATAGAGGGATACCGGGTgcagcagaaaaaactttggacgtttggcga
gccactgaggccgaacaaagtcttgtttagactcaaaaccacttttatta
gaaagaggacatgctaacttaaattttgcggtataactttttaagtttgg
tcaagtagttgtcaagttataagcttttgaagttaaaattcacttttcga
aaagtgtgaaaaacacgtaataaaagggtattaaattaagcatttttaag
cgttttcgataagaatttttttcaaatatttctaaaaactgactatttac
taaaaactaactatgttgtaaacgaaaactgcttttaaaagtattttaac
aattaattatgtcgtaaaagtcgttaaataagtcaaatactgagctattt
tttcattatttgcataaatttaatacacctttttttacgtgttttttaca
cttttcgaaaagtgaattttgacttcaaaagcttataacttgacaactac
ttgaccaaacttaaaaagttataccgcaaaatttaagttagcatgtcgtc
tttctaataaaagtggttttgagtctaaacaagactttgttcggcctcag
tggctcgccaaacgtccaaagttttttctgctgcACCCGGTACGCTTAAT
TCGAATTTGAGTTTCATCTATTTCTATGAATTTGATCGATTCATGGGTTA
ATATCCTTATATTAGAGAAGTTGTTCTCACTATAAAATCCAGGGACCCTA
ACAGGAGTTACTGACGTATGACTAAAATCGGCGGATCTGTGatcattttt
cttgattttctaataaactccttatgcaacaaaaaaaagaacaatagccC
TTCATCCAAATTTAAtgattcttatgaaaaagagagTAGAGACAAAATGC
TATTATCATTTTTGTGTTCACATCGATCTCAACATCCGGTCGGAATttac
ttcataactcgaacgTCAACGTTCTTCAATCATCAATCgaatcttttttg
aattttttgataatATAATGTGAGTTTTATGAAAACATTGTTAACCCTCA
CTTAGTATTATGCCATTTTACATATTACCAttttaccaaagatttccaaa
atggtacttgatgcctctctgcttgaggctcagcaattaagagaaggatc
aagggtaaatggagcaatccaggggaaaagagtggcgccctcccctacct
tcgggtagatagctatcgaaagaggagccttcgggtcgccctggCTGCGG
TTGCAGACTTACCTACTTATTATGCCATTTTACACTTATTTCTTTACTCG
TACTCCCAGCCAAAAAGAAGAATCAATTACTACAAAAATTCCATGCTGTA
TGGTTACTGGTAGTACGCGTTGCTCACAAATGGCTCTACCGTTTTCTAGA
TATTGTCGTAACCGTATCCTTTTCACTTGTGATTTGTAACCCTTTGAGAT
TTTTGGGCTGTGTCTCTTCTATCTGAGCAACTTTTTATAAAGtcaagata
ttcaaatttttcaattcaagcAAGTAAAACAattagaatttcaacgtaaa
aTTCGTGTATTATAAAACAGCCTtaagggttttgtttttacataagtgtt
ctcgtttcatatcagacacatatttcatgtcgggacagtgtctgcctatt
gttttattatgcttatataagcaaaaaatgtttttcttttcctctttttg
accaatcttgctccacatccgtgtcaatctaatgtgaaaaagcttgtgaa
ttaaaattgatgagtaagcaaacgatatcactcttatttaaaataaaatc
tataatttaaatttgaattttgaatttaaagcaTCTTCTCATGTAATCTA
AAGAGTCTGATAATGGAATCTCCGTGAAACAACATCATGACTTTTCCTTG
ACAATATTATGACCACTACTACCACAACCAGATATAAACGAAGATACTGA
CCAATTGCTTTTCGTTCCGAAGAACATTGCATCATTGCAACGAAGTGATG
TGCCCGGCCTTAAGATCTTCAGACCTGACCTCTTGCCAAAGGTATTATTT
TCTAGCAGtgcttttttaaacattaaCTCTTGTTCACACTTAAGGCTACC
ATCTCTTTTAAACCAAAGATTCGAAACTGAATCGTTTTCCACAAGTTTCa
taaattcaaaactggtgACAAACGCCCGATGCTTTTCGGGTGTTTCTGTa
aaaaaaGATAACCTCATTAATATCAAGATTTGTTTTAGGTTTCTTTGCTT
TGATTGACATCGCTTATTCTATTTCTGCGTCATAGGGGTTAAAAGCGAGT
TCCTCTCTCaaagcgaaacgaaaagtgtgtcgaaaaagcaactggaaaag
aaaaggagctcaaaagaaaacaccgaagaaaccaaccaaacccaaaacca
CAGCTATCCAAGCTTCTTCGCAATCAAGTCAAGAAACAACCTCGGAGATT
GATTTATCTGACGTTCAACACCCGGATAACCTATCTATCGGAACACCACC
CATATTGAGTGAATCAAGTAGTAGCTACACTGAGAGCGATTCTGAGTCAG
ATATTTTAACACCGGAAGAAGCATTCCGTCTACCACCCGGTAGTCTGTCC
TATCCGCCTGGTTTGGATGATGAAGACTCCCTTACCGGGATGCATCACAC
AGCCCGGGCATGTAATATAGCAGACGAGGAGGATGAGTTAATGAGATGCG
GATCCAACTTCTCAATGGATAACGAAAAACAAGACATGATAACACGTGAA
TTATCTTCACCCACATTGAATCAGTTCTCGGAATTCGACCAATCACTGTT
CGGTGCTGCCACCGCTTTTTCACCAACATCCGGCAGTGACGTCACATTAC
CTCATACGTCATCTTTGACTTCACCAAACCAAGAAATAACACCCTTGTCA
GCCTCTTTTGGAACCAAtccaaaatattcttcaaagaATCCATCACCCTT
AAAAAATCATACAAATTCTCACACAGGGCACGGTTCAGTCACGACTCTCA
AAATCACACCCTTAAACATGTCACCTCGTAAAGCATCGTCTAAACTCAAC
GTTAGACCACCACTTTTGACATCACAATCCATGGTCAAACCTCCCTTAGT
TAGCAATACTTTCACACAAAGCTCGTCAACTAAAGATGAATCTTGGAATA
AACAATATATGCAGATTGATAATTTTGGCGATCCAGATCTTTTGAATGAC
ATTGCCATGGATGATGAAGAAACTCCATTAGAGAAAGTCAATcctgatat
tttcttttcatcagCTTTTCCAGTTACTACCACCGCATCTAATGATTAG Coding sequence (CDS) from alignment at sc0000287_pilon:21416..28164+ >XLOC_001445 ID=XLOC_001445|Name=XLOC_001445|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4146bp|location=Sequence derived from alignment at sc0000287_pilon:21416..28164+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtttgaaggaaaaaaCATACACTTATCACCGATCGATGGCAAACCATT
ATGCAGTTTCAGCAAGAAGCTTTGTCGACAAAGACGTCTTCACAATTACG
CGTTTTGTATACGGCATATTTTGGAAGATACTGATTCACCTTTCAAACAA
TGTCCTTATCAAACGAAGTCAGGAGATATTTGTATCAACGCTGTACCTGT
TGCTGCTGCAAGAGAatgtttgaaggaaaaaaCATACACTTATCACCGAT
CGATGGCAAACCATTATGCAGTTTCAGCAAGAAGCTTTGTCGACAAAGAC
GTCTTCACAATTACGCGTTTTGTATACGGCATATTTTGGAAGATACTGAT
TCACCTTTCAAACAATGTCCTTATCAAACGAAGTCAGGAGATATTTGTAT
CAACGCTGTACCTGTTGCTGCTGCAAGAGAATATTGCAATAAGCATATGC
TCATGATGGGGCTACAACCAAAGACTACCAAAACTCAAATAGACAAGAAA
CCTGTTACTACTACAGTTAAGAAAGCATGTTCCAAGGCTATCAAAAGTAA
AATCTCCACAAATAGCagtaaaaaagtgatgcatttgATGGAAACacttc
aaaaagaagatgcaaCGAAAAGTACGCATGCGCGTAAACGACAAAAATCA
TATGACCGTTATTTGTCAATGTCGGTGATGAGGCGTCATATTTGGAGCAA
ACAACCTCGCTCTGATGTCATGAAAGAATTGATTGAAAACAAGAAGTATT
TTagaaagacaaagaaaaagaagacgcTGACTAGCTACAATATTGCAATA
AGCATATGCTCATGATGGGGCTACAACCAAAGACTACCAAAACTCAAATA
GACAAGAAACCTGTTACTACTACAGTTAAGAAAGCATGTTCCAAGGCTAT
CAAAAGTAAAATCTCCACAAATAGCagtaaaaaagtgatgcatttgATGG
AAACacttcaaaaagaagatgcaaCGAAAAGTACGCATGCGCGTAAACGA
CAAAAATCATATGACCGTTATTTGTCAATGTCGGTGATGAGGCGTCATAT
TTGGAGCAAACAACCTCGCTCTGATGTCATGAAAGAATTGATTGAAAACA
AGAAGTATTTTagaaagacaaagaaaaagaagacgcTGACTAGCTACACT
CTGGGAACATCCGAAGATGAAAGTGACAGCTTCATTGAATCATTTCAACA
ACAATTTGATAACGATGGCAGCTCTGGGAACATCCGAAGATGAAAGTGAC
AGCTTCATTGAATCATTTCAACAACAATTTGATAACGATGGCAGTCATAA
TTCATCAGCTGAGAAGTTATTGACTCAACTGAAACACCAACATGTTCAAC
TGCAAAACATtgtcaaagaaaaaatgaaaagtacttCACTCTCATATTCA
GTCCTATCAACTCTGGTGGAAGCAAGTCGTGAGAATGTTACGGAAACGGC
AAACATTCTTACGGACGGTAACTCGAAAAACAAAGTTTATCATCATAATT
CATCAGCTGAGAAGTTATTGACTCAACTGAAACACCAACATGTTCAACTG
CAAAACATtgtcaaagaaaaaatgaaaagtacttCACTCTCATATTCAGT
CCTATCAACTCTGGTGGAAGCAAGTCGTGAGAATGTTACGGAAACGGCAA
ACATTCTTACGGACGGTAACTCGAAAAACAAAGTTTATCACCAAAAAGAA
GAATCAATTACTACAAAAATTCCATGCTGTATGGTTACTGGTAGTACGCG
TTGCTCACAAATGGCTCTACCGTTTTCTAGATATTGTCGTAACCCCAAAA
AGAAGAATCAATTACTACAAAAATTCCATGCTGTATGGTTACTGGTAGTA
CGCGTTGCTCACAAATGGCTCTACCGTTTTCTAGATATTGTCGTAACCAT
ATAAACGAAGATACTGACCAATTGCTTTTCGTTCCGAAGAACATTGCATC
ATTGCAACGAAGTGATGTGCCCGGCCTTAAGATCTTCAGACCTGACCTCT
TGCCAAAGATATAAACGAAGATACTGACCAATTGCTTTTCGTTCCGAAGA
ACATTGCATCATTGCAACGAAGTGATGTGCCCGGCCTTAAGATCTTCAGA
CCTGACCTCTTGCCAAAGGGGTTAAAAGCGAGTTCCTCTCTCaaagcgaa
acgaaaagtgtgtcgaaaaagcaactggaaaagaaaaggagctcaaaaga
aaacaccgaagaaaccaaccaaacccaaaaccaCAGCTATCCAAGCTTCT
TCGCAATCAAGTCAAGAAACAACCTCGGAGATTGATTTATCTGACGTTCA
ACACCCGGATAACCTATCTATCGGAACACCACCCATATTGAGTGAATCAA
GTAGTAGCTACACTGAGAGCGATTCTGAGTCAGATATTTTAACACCGGAA
GAAGCATTCCGTCTACCACCCGGTAGTCTGTCCTATCCGCCTGGTTTGGA
TGATGAAGACTCCCTTACCGGGATGCATCACACAGCCCGGGCATGTAATA
TAGCAGACGAGGAGGATGAGTTAATGAGATGCGGATCCAACTTCTCAATG
GATAACGAAAAACAAGACATGATAACACGTGAATTATCTTCACCCACATT
GAATCAGTTCTCGGAATTCGACCAATCACTGTTCGGTGCTGCCACCGCTT
TTTCACCAACATCCGGCAGTGACGTCACATTACCTCATACGTCATCTTTG
ACTTCACCAAACCAAGAAATAACACCCTTGTCAGCCTCTTTTGGAACCAA
tccaaaatattcttcaaagaATCCATCACCCTTAAAAAATCATACAAATT
CTCACACAGGGCACGGTTCAGTCACGACTCTCAAAATCACACCCTTAAAC
ATGTCACCTCGTAAAGCATCGTCTAAACTCAACGTTAGACCACCACTTTT
GACATCACAATCCATGGTCAAACCTCCCTTAGTTAGCAATACTTTCACAC
AAAGCTCGTCAACTAAAGATGAATCTTGGAATAAACAATATATGCAGATT
GATAATTTTGGCGATCCAGATCTTTTGAATGACATTGCCATGGATGATGA
AGAAACTCCATTAGAGAAAGTCAATcctgatattttcttttcatcagCTT
TTCCAGTTACTACCACCGCATCTAATGATTAGGGGTTAAAAGCGAGTTCC
TCTCTCaaagcgaaacgaaaagtgtgtcgaaaaagcaactggaaaagaaa
aggagctcaaaagaaaacaccgaagaaaccaaccaaacccaaaaccaCAG
CTATCCAAGCTTCTTCGCAATCAAGTCAAGAAACAACCTCGGAGATTGAT
TTATCTGACGTTCAACACCCGGATAACCTATCTATCGGAACACCACCCAT
ATTGAGTGAATCAAGTAGTAGCTACACTGAGAGCGATTCTGAGTCAGATA
TTTTAACACCGGAAGAAGCATTCCGTCTACCACCCGGTAGTCTGTCCTAT
CCGCCTGGTTTGGATGATGAAGACTCCCTTACCGGGATGCATCACACAGC
CCGGGCATGTAATATAGCAGACGAGGAGGATGAGTTAATGAGATGCGGAT
CCAACTTCTCAATGGATAACGAAAAACAAGACATGATAACACGTGAATTA
TCTTCACCCACATTGAATCAGTTCTCGGAATTCGACCAATCACTGTTCGG
TGCTGCCACCGCTTTTTCACCAACATCCGGCAGTGACGTCACATTACCTC
ATACGTCATCTTTGACTTCACCAAACCAAGAAATAACACCCTTGTCAGCC
TCTTTTGGAACCAAtccaaaatattcttcaaagaATCCATCACCCTTAAA
AAATCATACAAATTCTCACACAGGGCACGGTTCAGTCACGACTCTCAAAA
TCACACCCTTAAACATGTCACCTCGTAAAGCATCGTCTAAACTCAACGTT
AGACCACCACTTTTGACATCACAATCCATGGTCAAACCTCCCTTAGTTAG
CAATACTTTCACACAAAGCTCGTCAACTAAAGATGAATCTTGGAATAAAC
AATATATGCAGATTGATAATTTTGGCGATCCAGATCTTTTGAATGACATT
GCCATGGATGATGAAGAAACTCCATTAGAGAAAGTCAATcctgatatttt
cttttcatcagCTTTTCCAGTTACTACCACCGCATCTAATGATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287_pilon | genome | sc0000287_pilon:21416..28164 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1060-2073:5736 |
| Aaloc | 952-1059:5384 |
| Aaloc | 847-948:4761 |
| Aaloc | 649-843:3001 |
| Aaloc | 577-645:2516 |
| Aaloc | 217-573:565 |
| Aaloc | 1-213:1 |
|
