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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:115305..117523- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015940 ID=XLOC_015940|Name=XLOC_015940|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2219bp|location=Sequence derived from alignment at sc0000323_pilon:115305..117523- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCATCAAAAGCAAACAATTTCTATCCTTAAATATCTTCTTGATTAT
GCACACATCATTCATCAAATGTTACCAACAACGACACGACTCTTTCTTCC
AACTGAACACAAACACAGAGATCACCAATACTAACTACCAATCAACACTC
TCCATCTCATATCTTCAATGTTCATTCGTGTGTCAACATCAGGACTGCAC
TGCAGCAAGTTATAATTCCAAAGATGGAGTGTGCAAAACTTTCCAACTCC
CTTTAAAACATATTCTAACGTCACCGAAAGAAGAAACGGATTCCTTTATC
TTCCAACCATGTGTTGAAACTCCATCTAAATGTCTACACGGAGGAGAGTG
TATCCGAAATGTGACGTCATCCACAGGATATCATTGCATCTGTGTTGAAC
CGTGGAGGGGTGATAAATGCGAAAAACGTATGTGTCATAAATTTTTTCTA
TATCCCATATTCATTGCCGTGTAGCTGTAAGTAATATGTGTTGTCCTTAC
GCCTACTCTATAGTTGAGCCCCCCCCCAGTCACCTTTCAAATCATGCAAT
CAAGCAAAGAAAAATTAAAATCATGTTATCACGAGTTAAAATTCCTTTCT
ATCAAGATCATATTGATCACGTTGGTTCCTCTGATCACGCAATCACGAAA
ACCATTGGGGGCATCTTAGTTGATGAGCATTAATCGGAGAGGGAAATCAA
CTATCATTTTTATAACTTTGGGAACCACAACCTTCGGATGTTATACTTAT
ATGCTACAATCGTTCCTTTGCAGCTAAAAAACTTACTCGCTAACTATTTT
GTAATGTTTTTTATTGCACAGCTCCTCCATGTCCTTGGCCGGATTTCATC
TTCAAAAGAGAAATGTGTTATTACAAGAACTCCATCAATCAAGAAACTTT
CTGGAGTGCACAGGCGGAATGTGTCAAGAGGGGTGGTCGCTTAGCAACAG
CTGCAACGAATGATGGTTGGCAGAGTATTCGGGAGATTGTTATTGAGGAA
AATCAGTGGTTCACCATTGGCTTGACAAGAACGGTATGTATTAAGTCAAC
GACATATGATAAACAACTAAAGTCTATCCAGATATAATTAGCAGTGGAAA
CAAGAATGTCTGTAACTTTTGATAGCCAAATCCAATTGGGAAAATTGTTT
TGCTTGTTTTAGAGAATCAAAAGCGCTATATTTGAATGTATATATTTTTG
GTTGAAAAATTCGCGATTTTTAGCGGTTAAATTTGTGATTGCAAAAATTG
AGCTTTTTTTCTACTTATGCTACAACGTTCATTCTTACACCAGTGTTAGT
TCAAACTTAGGTTAAGAAGGTTGTCAAATTTCAAGGCAAACAGAAAAGTC
CTTCGGAAGAAGGACTGTTTGTGACTGCTGAATTGGAAATCTGACCATGG
ACATATGGTCTGACGTCTGACAGTAAAAATGTAATATTTTTTTATAGTTT
TGACTCGCACCCATTTTGATTTGTTTGTTTCAGTAAAATAAGAAATAAAA
CATACTTCACTGTAAGGATCAGAAACTTTCGGTAAAATACACTGTAAGGG
TACCTTTTCACTGCTCAAGAGCTGATTTTTCAGTGTGAATAATACACCCT
TTTGGTACCCAAATCCACCTCTTGAAACAAAGAAAGTAACACGGGGAAGA
TCGTTTTAAATGCTTTTGGGCTTTTGTTTGTTTATGTTCTGAATTGTTAT
CGACAAAGGGACTGTCGATTCTCTCTTACAGATGTAAACCCACCCTTCAC
CGTACGAGGAAAGATAATACTAAGTGCGAACCAGGTCTGCCTTTTTATTA
ATTTCTCTACGAACATTATTCTACTGTCTCGTTTTGAATACATTCATGAT
AATTGAATGCCAAAGGAGCTCATCAAAATTTGACTCGCTATTGAAAATGT
GTCATTTTAAGTCTGGTGAGATATAATTACCTTGGTAATTGTCTGAAAAA
GAAGCAGTTGTTGTTCCTGGCGTAATTCATGAAAGGTTCTATCATGTATT
GAATATTTTCTAAATAAAATACTTCTTTTCATATTTCAGGATTCTAGTGG
TTGGCAATGGTTGAGTGGTGCTCCCAACAACACCATTCCATGGAAAGCAC
CCTTCGAGCCGTCCGGTGATGGAGACTGTGCATCTGTTTTTCCGGACACC
TCCGGTCTCAACGATTTTCATTGTGATATCATAAGGAGATATATTTGTGA
AAGAGATATTAATCTATGA Coding sequence (CDS) from alignment at sc0000323_pilon:115305..117523- >XLOC_015940 ID=XLOC_015940|Name=XLOC_015940|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1638bp|location=Sequence derived from alignment at sc0000323_pilon:115305..117523- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCATCAAAAGCAAACAATTTCTATCCTTAAATATCTTCTTGATTAT
GCACACATCATTCATCAAATGTTACCAACAACGACACGACTCTTTCTTCC
AACTGAACACAAACACAGAGATCACCAATACTAACTACCAATCAACACTC
TCCATCTCATATCTTCAATGTTCATTCGTGTGTCAACATCAGGACTGCAC
TGCAGCAAGTTATAATTCCAAAGATGGAGTGTGCAAAACTTTCCAACTCC
CTTTAAAACATATTCTAACGTCACCGAAAGAAGAAACGGATTCCTTTATC
TTCCAACCATGTGTTGAAACTCCATCTAAATGTCTACACGGAGGAGAGTG
TATCCGAAATGTGACGTCATCCACAGGATATCATTGCATCTGTGTTGAAC
CGTGGAGGGGTGATAAATGCGAAAAACATGTTCATCAAAAGCAAACAATT
TCTATCCTTAAATATCTTCTTGATTATGCACACATCATTCATCAAATGTT
ACCAACAACGACACGACTCTTTCTTCCAACTGAACACAAACACAGAGATC
ACCAATACTAACTACCAATCAACACTCTCCATCTCATATCTTCAATGTTC
ATTCGTGTGTCAACATCAGGACTGCACTGCAGCAAGTTATAATTCCAAAG
ATGGAGTGTGCAAAACTTTCCAACTCCCTTTAAAACATATTCTAACGTCA
CCGAAAGAAGAAACGGATTCCTTTATCTTCCAACCATGTGTTGAAACTCC
ATCTAAATGTCTACACGGAGGAGAGTGTATCCGAAATGTGACGTCATCCA
CAGGATATCATTGCATCTGTGTTGAACCGTGGAGGGGTGATAAATGCGAA
AAACCTCCTCCATGTCCTTGGCCGGATTTCATCTTCAAAAGAGAAATGTG
TTATTACAAGAACTCCATCAATCAAGAAACTTTCTGGAGTGCACAGGCGG
AATGTGTCAAGAGGGGTGGTCGCTTAGCAACAGCTGCAACGAATGATGGT
TGGCAGAGTATTCGGGAGATTGTTATTGAGGAAAATCAGTGGTTCACCAT
TGGCTTGACAAGAACGCTCCTCCATGTCCTTGGCCGGATTTCATCTTCAA
AAGAGAAATGTGTTATTACAAGAACTCCATCAATCAAGAAACTTTCTGGA
GTGCACAGGCGGAATGTGTCAAGAGGGGTGGTCGCTTAGCAACAGCTGCA
ACGAATGATGGTTGGCAGAGTATTCGGGAGATTGTTATTGAGGAAAATCA
GTGGTTCACCATTGGCTTGACAAGAACGGATTCTAGTGGTTGGCAATGGT
TGAGTGGTGCTCCCAACAACACCATTCCATGGAAAGCACCCTTCGAGCCG
TCCGGTGATGGAGACTGTGCATCTGTTTTTCCGGACACCTCCGGTCTCAA
CGATTTTCATTGTGATATCATAAGGAGATATATTTGTGAAAGAGATATTA
ATCTATGAGATTCTAGTGGTTGGCAATGGTTGAGTGGTGCTCCCAACAAC
ACCATTCCATGGAAAGCACCCTTCGAGCCGTCCGGTGATGGAGACTGTGC
ATCTGTTTTTCCGGACACCTCCGGTCTCAACGATTTTCATTGTGATATCA
TAAGGAGATATATTTGTGAAAGAGATATTAATCTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:115305..117523 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-819:181 |
| Aaloc | 430-639:1397 |
| Aaloc | 1-426:2220 |
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