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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000178_pilon:61968..68758+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037078 ID=XLOC_037078|Name=XLOC_037078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6791bp|location=Sequence derived from alignment at sc0000178_pilon:61968..68758+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTCTGCAACATACAGGCGAAAATATCTACGTTATATACCTTTTAAG
AGCATCGCGGGCAGACTCAGCGCTCATATATAGTACATGTAACAGACTAC
GAAAACAAACTCATGTGCTCAAAAATATCATGGCGTCGAACGAGAGCAGA
CACAAGAAAGAAcctaaaattcactttttgaaattAGCATTTAAAGATGC
AAAGCAAATGTCTCAGGGAAAGCATTCGTGCTTGGAAGAGGTGAAGCACA
CCATGAACATTTCATTAGCTCCAAAATTTATTGGAAACTTGAAATTGGGG
TTGAAAGAAGAAatgaataaatttctttttgtgtaCCAAACGAAGCTAAA
TGGTGTCCCACTTGCTTATGATAGAATCCAGATCACCAAATCAAAAATCA
TTGATGACCAAGAATTCCTGAATCTTGAAATATGTGTCAATTTTATAGTA
TTTCAACCAGAAATATCCAAAATTCTACGAGGCTGTGTTAATAAATTAGG
TATAAacttacttttcaaattttgtttttctcaaaattttaaactttata
ttttacttcacagataatttcaatttttaactgGACCCCAAACCttctgc
aactcaaccaaataaaaATAGAAGTAGATAAATTAGCTTGtctgtataga
ccttttttcaaagaggccaccctgttgaataattatgtagtccagcagaa
aaacaatgataaaaccatgcataattattacaatatgcatgatacagtaa
ttatgcctgtctctatcattgtttttatgactggactacataattattca
acaggacgtcctctttgaaaaaaggtctataggcATCAGCTGTCTTGCTT
TAGGTCAAGGTCAATCATAGCTTCAGCAcccccccTTACTTttttattgg
ggggggggggctaagaaatattttggactttaaagagcctgggggctaaa
attacgaaaatatttggggggacctagattgttggggggaACCTAGATaa
tctgactgagactctgggggctgttcagctaattcTAAAAGATGTCTTAT
CATACTATTAAATcgaatataaaaagcaaaagattggttaacataaatat
taatacaagtaaaatttagttttcatttatcagtaccgtactcgcatata
ttttttattgacttctctctacACGTCTCTCTACCTACAAGGGCgagagg
aaaatgtttttgttttttccccaagtgttaggggacctagctaaattgtt
ggggggaccttactttgttggggggggagctagaaacctggctgaagcta
tgtcAATCTTCTAATCTAAATCTTAACAAAAACTCTTTATTTGACTAGAG
GAAGAATTTTCTTGTCATTAATTTGATGCTAAAGTTTGTCATTATTTAAC
ATAATATTGTCAGTTAGTGAAAgtatagcctgggaatccaagctcaaatt
atagaaaaaacaaaaaataccccacctcacaaagttctaagattatagag
cttggtgcaagTAGATAAGTCTGACACATAATGTTATAAcaagacgatgt
caatcgaaccaatcgaacgccgaatcaattgaacgcaattgaacacaatc
gaataattgcaatcgaatattacccaggatttgccgttcgattgcttcaa
ttacgtttgattgtattcgagtgcgttcgattgtattcgattatgttcga
ctGATTCAATAGTACTAGATTTTATTCACTTTCGTACGGgacttaagcgc
tcggccgcccacgctaaaaagctctaacggggtaatccaatttaatttaa
tggcaatcaaactcatcgaacataatcgaacgaaatcgaatgtaattgac
aatcaatcgaaccaattgaatatagtcaactatcaatcgaaccaatctaa
ccttactcgaacgcaatcgaacacaatcaaatattacccaggattcggcc
gttcgattaagattcgattacgttcgtcaatcgaatcgcaattattcgat
cgcgttcgattacgttcgattggttcgattgcgatttttgttcgaagttg
ttcgattgacaccgtctggttataaacagtctgtgtgtgaacccttgttg
acagacttgctgaactttggaaacccaggcaaacacacataatcaactct
aaaagactttcaaaactactaaaaaccacatcaaaacatcagccacatgt
ttatttagacttccagccaacagccattttgtttcgaaatgaatctatgt
tttctttttcatttgttttcctttttttctgcagagtcagctttttcttt
ttgacttgacgtcaaatacaaaactgaacagttgtcgtctgaaaaatgca
caaagatggcgaaaagataccctacaatgcaggaagtgccaccgtttagt
ccattatctttgtacagaactgccactttaccagatccagatatgcttgt
catacaaatcaagaagtttccagtgtcaaaactgtaccaaaatcgcacca
caggtaatggaaaggtataattcaaatgaaacatcaaaaattgaaggatt
caaaaacgaaatcaaagcctgtgagaatataatgaaaaggcaggacgaag
aaataaaccatttgaaagcacaagacgtcaatgttatggtcaacgaaatg
aaagaaactatcgacaccagaataaccacacttgaaaagaagattgaaag
catcatcgaaaagaaagaagaggaaagaccaccaatgagctacgctaaaa
tcacatccaaacacatcgagaaaaacattggagatgcgattcgaaaagca
aagcaggaggagcagctgattcgatcgacagcacgcaacctaattttcca
tgggattgatgaatcgacagatgaaacTGAAGCATAGAGTGCAGAGGGGT
TGAAGcccccccTGAAcgttcagccccccccccccccccagagattgccc
ccaccaaaattcgaaatagacAGTCCCCCtacaaaaatacacaaaaaaca
aaaatgttagaatggaaaaaatttcaaacaatgcaaGGTCTTCATTTTGC
ATGTCCACACAAGAGAAAGAGATACCAAATGTATAAtgtcttcttttgaa
attctaatcaaCAAACGTCAATAGTACGACTTCATTATTACACCCggggg
gggAGGCAATCAAGGTAAATggcctaccagacgttcggcccttaagggta
ggtttttcatagttcagctagtgcactgtaagggtaggaaattacaaaac
tgcactgaactgcactctcagggtaggaaattgtgataaaaggccaattt
attggtaaaattggcacaaaattagtcaattttagaggaaatattccaca
ttttcttggaaaattttgaaaaagtgcactgtaagggtatcatttttcat
ggaaattcactgcactgtaagggtctgattttagaagccaaattttggcc
CGAACGTATGGttgttttcagatcgagtgcccgcgttattacacaaacaa
aataccaaaatgtacaaagaaaaatttcttagttcttggaaaaagttatt
aggttagcccccagtcaacagacctaaacaaatagcccccccccctgagt
aagtagccccccctgatcttagggaaaaagagccccCAGCCAGAACTTTA
ggttctagcccccccccctaagagCCAGGGGGGATGCATTCTAtgtgaag
aagaaacaaaaatcgaggacgaagaatttatccatgacaaaattattggt
cagcggctccatctgaggaatataaagattaccgagacacagcggatcgg
gaaatttacgaaagaaagagaagataaagcgagataccgaccaatcaaag
tcacatttacgaacgaggaggacaagaacacagtgttgcaagcaataaca
aaagaaaaaggctttccttgccgagtgacagaggatttgaccaaaaatga
aagacaaataatcaaagaatggtgtaaggaagccgaaaaaatgaatgcta
aaatcaagggagacaacacaaaatggaaagtccgggggagaccgcgaaaa
aaactttatttaaaaaagatcgttgtaaaaagtacgagcggtttatagag
gcccatgtgtcttcacggtggcctgcaaacctgtaaagctttattattat
ttttccataaattatgcgcgcgcatcgaaattatcaaaatgcgtgctaaa
gtactgctaagtaatactggccaatcaggccgaacctgcattgcagggaa
aaatctccctgcaggcgagttacctgcgccaagcatTAAACAagtagcaa
aaatatcataaactagactgtgaacaaagtttaacgcttggattcccagg
ctagtgaaagtactttaatttttgaaacGTCTTTACGTCACATAGATCGA
TTTGTGAAACGTCTTTACGTCACATAGAAcgaaagaaaatagcaaaagaa
caaaggaattattCATAGCCACCATTTCGCAACCGGGATTGCGATTTTGC
GGAAATGGGAACCCTCATATCAAATAAAGCATCTGCTGAAAATTTTGTTC
TTCCCCCaaaaatgcgaaaatgaaaaatgaagaagcttTTGTTTTCTGAT
CGTCTATTTAATCTGCCataaagtgttataaaattccttaaagAAAGACA
CATTCTCCTACGAAGTGGCTTCATATAAATGATGCTGTTTAAAAGtatgt
cattttatcttaacaatttcCTAAACTACGTCACAACCACAGAGCGCTgg
cttttagttttatgacttgttctcactcgTTTAGTTTtcgtaataaaaag
aaatcgTTATTGtaaactttgaacatgcttaaaatcgaggtacttccact
aactgattGTGATAAATAAGGAAAGGTCTTTACTGTTAGTTGGTCTACCG
ACACCTGCCCTGCCCTATCTAATAGTCATTTAGGAGAATGTGATGACCTT
GACTGTTTATGATTAATAGGATTGGGGATTTTAACATCAGACCAACTTTT
GATATTGAGGGTCAGAGAATATAGTATTGAATGCAAAGTTGCCAAACTTC
GGAGGCTgcatgtttttaattgttaattTACTTGAAAGCCCATTTTGTGT
ATGATGAAAACAACCACCaaaaaaaTCTCAACatgaattctgaatttttt
gaaacCGTTAATTGGGGAACTTGAAAAATCagtgaacaatttttttcaca
atcaGAAGATTGGGGAAAcgtttttgaaagttgaaagttggAAAATTAGA
AAACTCAGGAAAAGTTTTgctaaaatttacaatttgaaCCAAAGACCTTC
TCTTAATCATGACTTTATGTTGAGTAATTaaaaaaaCTCCTGATCAAAAC
AAgaacaagaaaatgtttttagtaTATACAAACTTTTACTAAAACATGTA
TATACAGGGAGGGGATGAATGGTAAAATAGGCTAAGATAGGTGCTGGGTA
AGTTCAGTTGGTACGGGTTTGTTAATTATGACCTTTCCAAGTTTTTCTGA
AGGTAACAATgacaacaaaaagtcaaaatagtcTTTTTAAGGGTCAGAAT
TTCCGCTTTTTGGGTCTCTTTTAAGAGTTTGAAAGCCTACCTTGGTTGGT
TTCAGCTATTTGTTTCCTCACCAAATCCAAGGGTGACCGCATAGGACATC
CTTCAAAACTAGTGATACCCCACCCATAGTTTATTTTCTGTAATTCGTTT
CTTATTGACAGTAATGATCCAAAAAGTCTCTTTTAGTTTGAATCGGTTGG
ATTCAGCTATTTGTTTCCTCATCAAATCCAAGGGTGACCGCACAGGATAT
CCTTCAAAACTAGTGATACCCACCCATATAGTTTATTTTCTGTAAGTCGT
TTCTTATTGACAGTAATGGTCCCAAAAGTCTCTTTTAGTTTGAATGGTTT
TTATTCTAGATGATTTAATAAAGCTCTCATATGCAAATTTACATTATCTT
TGTTTTAGGTGATCATTATTATGGGTGTTTGTTTCATAATTGCATTAATG
GAATGGCTTTCAAACCAAATCCAAGCAAATTACCAACAGAGGAGATAAAG
AATTACTTCAAGAATATAAAGTTGGGAGATGAAAtcttgataaaaatttc
aaagattcaAACAGAGCATGAAGTTCTATTTGTAAAAGGTGGTATATGGA
CTGACAAACGATCCAGGTAAATTAGCCTCCTAAATATCTTTAAAAGGTGT
GTAACCCTTAGTAGATTGCAAACTGCTCATCTTCACGAGTTTATTTTGAC
GGCTAACCGTTTAAGAAAGAAGTTTTCGAAACCATTGCTTTATCCGCTGT
CTGACacttaaatttgtttttttatcagtTGTCAATACCTTGTATCTAGT
CCTATGAATTTGAACTTTCTGTATTTCAGGAAATTATCAAGGAGCGAAAC
AACAGAAGATAGCTTGGGTGACCCGAGCGTGAAATCTGAAATGTTAGAGG
AAAATAACAACGATCAATCGATTATAGAGAGTTTAACAACTACTACGACG
ACATCaccgaaaaagaaaaagaagaaaaaattgaaagacgTTGATAGCGA
CAGAGAGACCACTGGCAATCACGATCAACAAACTTTAACTAATGGACATC
ATATATTACCAATAAAAAGTGAACCTTTATCAGAAAGTGAATATATTGCT
TCACCTAAGAAACAAAAGAAGCGTAAAGCGAGGGATGATTCTATTTTAAC
TGACATTGATGGGGATGTCGAATCTTCATCTTctccaagcaagaaaaaga
aaaagaagaaacggaaaatcaaaactgaagaagaggattaa Coding sequence (CDS) from alignment at sc0000178_pilon:61968..68758+ >XLOC_037078 ID=XLOC_037078|Name=XLOC_037078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000178_pilon:61968..68758+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTCTGCAACATACAGGCGAAAATATCTACGTTATATACCTTTTAAG
AGCATCGCGGGCAGACTCAGCGCTCATATATAGTACATGTAACAGACTAC
GAAAACAAACTCATGTGCTCAAAAATATCATGGCGTCGAACGAGAGCAGA
CACAAGAAAGAAcctaaaattcactttttgaaattAGCATTTAAAGATGC
AAAGCAAATGTCTCAGGGAAAGCATTCGTGCTTGGAAGAGGTGAAGCACA
CCATGAACATTTCATTAGCTCCAAAATTTATTGGAAACTTGAAATTGGGG
TTGAAAGAAGAAatgaataaatttctttttgtgtaCCAAACGAAGCTAAA
TGGTGTCCCACTTGCTTATGATAGAATCCAGATCACCAAATCAAAAATCA
TTGATGACCAAGAATTCCTGAATCTTGAAATATGTGTCAATTTTATAGTA
TTTCAACCAGAAATATCCAAAATTCTACGAGGCTGTGTTAATAAATTAGG
TTATTCTGCAACATACAGGCGAAAATATCTACGTTATATACCTTTTAAGA
GCATCGCGGGCAGACTCAGCGCTCATATATAGTACATGTAACAGACTACG
AAAACAAACTCATGTGCTCAAAAATATCATGGCGTCGAACGAGAGCAGAC
ACAAGAAAGAAcctaaaattcactttttgaaattAGCATTTAAAGATGCA
AAGCAAATGTCTCAGGGAAAGCATTCGTGCTTGGAAGAGGTGAAGCACAC
CATGAACATTTCATTAGCTCCAAAATTTATTGGAAACTTGAAATTGGGGT
TGAAAGAAGAAatgaataaatttctttttgtgtaCCAAACGAAGCTAAAT
GGTGTCCCACTTGCTTATGATAGAATCCAGATCACCAAATCAAAAATCAT
TGATGACCAAGAATTCCTGAATCTTGAAATATGTGTCAATTTTATAGTAT
TTCAACCAGAAATATCCAAAATTCTACGAGGCTGTGTTAATAAATTAGGT
GATCATTATTATGGGTGTTTGTTTCATAATTGCATTAATGGAATGGCTTT
CAAACCAAATCCAAGCAAATTACCAACAGAGGAGATAAAGAATTACTTCA
AGAATATAAAGTTGGGAGATGAAAtcttgataaaaatttcaaagattcaA
ACAGAGCATGAAGTTCTATTTGTAAAAGGTGGTATATGGACTGACAAACG
ATCCAGGTGATCATTATTATGGGTGTTTGTTTCATAATTGCATTAATGGA
ATGGCTTTCAAACCAAATCCAAGCAAATTACCAACAGAGGAGATAAAGAA
TTACTTCAAGAATATAAAGTTGGGAGATGAAAtcttgataaaaatttcaa
agattcaAACAGAGCATGAAGTTCTATTTGTAAAAGGTGGTATATGGACT
GACAAACGATCCAGGAAATTATCAAGGAGCGAAACAACAGAAGATAGCTT
GGGTGACCCGAGCGTGAAATCTGAAATGTTAGAGGAAAATAACAACGATC
AATCGATTATAGAGAGTTTAACAACTACTACGACGACATCaccgaaaaag
aaaaagaagaaaaaattgaaagacgTTGATAGCGACAGAGAGACCACTGG
CAATCACGATCAACAAACTTTAACTAATGGACATCATATATTACCAATAA
AAAGTGAACCTTTATCAGAAAGTGAATATATTGCTTCACCTAAGAAACAA
AAGAAGCGTAAAGCGAGGGATGATTCTATTTTAACTGACATTGATGGGGA
TGTCGAATCTTCATCTTctccaagcaagaaaaagaaaaagaagaaacgga
aaatcaaaactgaagaagaggattaaGAAATTATCAAGGAGCGAAACAAC
AGAAGATAGCTTGGGTGACCCGAGCGTGAAATCTGAAATGTTAGAGGAAA
ATAACAACGATCAATCGATTATAGAGAGTTTAACAACTACTACGACGACA
TCaccgaaaaagaaaaagaagaaaaaattgaaagacgTTGATAGCGACAG
AGAGACCACTGGCAATCACGATCAACAAACTTTAACTAATGGACATCATA
TATTACCAATAAAAAGTGAACCTTTATCAGAAAGTGAATATATTGCTTCA
CCTAAGAAACAAAAGAAGCGTAAAGCGAGGGATGATTCTATTTTAACTGA
CATTGATGGGGATGTCGAATCTTCATCTTctccaagcaagaaaaagaaaa
agaagaaacggaaaatcaaaactgaagaagaggattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000178_pilon | genome | sc0000178_pilon:61968..68758 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-1119:6381 |
| Aaloc | 502-705:5961 |
| Aaloc | 1-498:1 |
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