XLOC_039488 (mRNA) -

Overview
NameXLOC_039488
Unique NameXLOC_039488
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:1933743..1934281-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039488 ID=XLOC_039488|Name=XLOC_039488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=539bp|location=Sequence derived from alignment at sc0000023_pilon:1933743..1934281- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACTTCCATAGAGCAAAAGTGACGACATCCAAGGGATGCCATGG
AGACAAATCACCATCTCACTTCGCTTTGGCTAATCGTCATGATGATTTCT
TTTTAGATTTTAATTTTGGCCTACTGTATTTCTTCAATGTTTCCATCGCC
TTAGGTTTATGGTCAAGAAGCTATAAAAAAATTGAAATCAATTAACTTAT
TTAATAGCGAGTCTGCATAAACAAGACAATATAGAAAGAGGGTTGATATA
TTGTTATTAGATACAAGCATAGACAATTTCTACTCTGGCCTCAGTTGGTA
AAAATCTAAACAGGTTTGGAAATGCAAGACGCTGAAACTGGGTCAAAAAC
TGGAGAAAAAAAAAAAGAACAGTCTAAACCCAAGACTTCAAAAATTGAAG
ATATAATACCTTAAACATGGTAGATTTAGCTTCTTCTAGTTGTTCTGTGC
TGCATCGACACCTCTGTATGCTGCCTTGTATTAGTTCGTGTATTAACCGT
AACTGCAGATCATCTTCAGAGACATTCTCATTGTTCTGA

Coding sequence (CDS) from alignment at sc0000023_pilon:1933743..1934281-

>XLOC_039488 ID=XLOC_039488|Name=XLOC_039488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=600bp|location=Sequence derived from alignment at sc0000023_pilon:1933743..1934281- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACTTCCATAGAGCAAAAGTGACGACATCCAAGGGATGCCATGG
AGACAAATCACCATCTCACTTCGCTTTGGCTAATCGTCATGATGATTTCT
TTTTAGATTTTAATTTTGGCCTACTGTATTTCTTCAATGTTTCCATCGCC
TTAGGTTTATGATGAAGTACTTCCATAGAGCAAAAGTGACGACATCCAAG
GGATGCCATGGAGACAAATCACCATCTCACTTCGCTTTGGCTAATCGTCA
TGATGATTTCTTTTTAGATTTTAATTTTGGCCTACTGTATTTCTTCAATG
TTTCCATCGCCTTAGGTTTATGATATAATACCTTAAACATGGTAGATTTA
GCTTCTTCTAGTTGTTCTGTGCTGCATCGACACCTCTGTATGCTGCCTTG
TATTAGTTCGTGTATTAACCGTAACTGCAGATCATCTTCAGAGACATTCT
CATTGTTCTGAATATAATACCTTAAACATGGTAGATTTAGCTTCTTCTAG
TTGTTCTGTGCTGCATCGACACCTCTGTATGCTGCCTTGTATTAGTTCGT
GTATTAACCGTAACTGCAGATCATCTTCAGAGACATTCTCATTGTTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039488XLOC_039488-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:1933743..1934281 -
Properties
Property NameValue
Aaloc163-300:139
Aaloc1-159:540